| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610725
Identifier: 120610725
GI number: 120610725
Start: 2233708
End: 2234535
Strand: Reverse
Name: 120610725
Synonym: Aave_2046
Alternate gene names: NA
Gene position: 2234535-2233708 (Counterclockwise)
Preceding gene: 120610731
Following gene: 120610724
Centisome position: 41.75
GC content: 65.58
Gene sequence:
>828_bases ATGACGTACTGCGTCGCCATCAAGCTCAATGCCGGACTGGTCTTCCTGTCCGATTCCCGCACCAATGCCGGCCTCGACCA GATCAGTTCCTTCCGCAAGATGATGATCTACGAGCGGCCCGGCGACCGCTTCATGGTGCTGCTGTCGGCCGGCAACCTGA GCATTTCGCAATCGGTGCGGGAGATGCTGCAGACCGAGCAGCTCTTCGACCGCGACGACAACGAGCCCATCACCATCTGG AACGCCAAGAGCATGTTCGACGCCGCCCGCGTGCTCGGCTCTGCCGTGCGGCACGTGCACGAACGCGACGGCGCCGCGCT GAAGCGCTCGGGGGTGGATTTCAACGTGTCGCTGGTGTTCGGCGGGCAGATCCAGGGCGAGGGCATGCGGCTCTTCCAGG TGTATTCGGCCGGCAATTTCATCGAGGCCACGCCCGAGACGCCCTACTTCCAGGTGGGCGAGTCCAAGTACGGCAAGCCG GTGCTCGACCGCGTGCTCACGCCCGACACGCCGCTGGACGAGGCCGCCAAGTGCGCGCTGGTGTCCATGGACAGCACGCT CAAGTCCAATCTCTCGGTGGGACTGCCGCTGGACCTCGTGGTGTACGAGGCCGGGCGCCTTTCCACCGACAGGATCGTCT GCATCGACGAGCAGAACCCGTATTTCCGCATGCTGCGCAGCAGCTGGGGCGAACGCCTGCGCCAGGTGTTCGACAGCATC GAGGACCCGGCCTGGAACGGCGGGGCGACCGACGTGCCGATCCTGGCGGAGCCCGCGCGCAGCCAGCCGCTGAAGAAGAT CGGCACGCCGAGCGACAAGCTCATCTGA
Upstream 100 bases:
>100_bases GTTCACTGCACTGAACAAGTATGCCGGGCCACCGGACCGGTGCCCGGCCTTGCGCTCCCACTACACTCGCTCCTTTCGCT TTCTCCCCGACGGTTCCTTC
Downstream 100 bases:
>100_bases CCCTGCCCCGCCGCGCCGGCCGCCCCGCGATGACGACGCCCCTTCCGCTGGTCTTCTCCCACGCCAACAGCTTTCCGGCA GGCACGTACCGCGTGCTCTT
Product: 20S proteasome subunits A/B
Products: NA
Alternate protein names: Proteasome-Type Protease; 20S Proteasome A/B Subunit; Peptidase T1 Family; Peptidase T1A Family; T1 Family Peptidase; 20S Proteasome Subunits A/B; 20S Proteasome A And Subunit Bs; Proteasome Protease; A And B-Type Proteasome Family Protein; T1A Family Peptidase; Proteasome A-Type And B-Type Family Protein; Proteasome Alpha-1 Subunit; Proteasome-Type Protease-Like Protein; 20S Proteasome A And B Subunit
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MTYCVAIKLNAGLVFLSDSRTNAGLDQISSFRKMMIYERPGDRFMVLLSAGNLSISQSVREMLQTEQLFDRDDNEPITIW NAKSMFDAARVLGSAVRHVHERDGAALKRSGVDFNVSLVFGGQIQGEGMRLFQVYSAGNFIEATPETPYFQVGESKYGKP VLDRVLTPDTPLDEAAKCALVSMDSTLKSNLSVGLPLDLVVYEAGRLSTDRIVCIDEQNPYFRMLRSSWGERLRQVFDSI EDPAWNGGATDVPILAEPARSQPLKKIGTPSDKLI
Sequences:
>Translated_275_residues MTYCVAIKLNAGLVFLSDSRTNAGLDQISSFRKMMIYERPGDRFMVLLSAGNLSISQSVREMLQTEQLFDRDDNEPITIW NAKSMFDAARVLGSAVRHVHERDGAALKRSGVDFNVSLVFGGQIQGEGMRLFQVYSAGNFIEATPETPYFQVGESKYGKP VLDRVLTPDTPLDEAAKCALVSMDSTLKSNLSVGLPLDLVVYEAGRLSTDRIVCIDEQNPYFRMLRSSWGERLRQVFDSI EDPAWNGGATDVPILAEPARSQPLKKIGTPSDKLI >Mature_274_residues TYCVAIKLNAGLVFLSDSRTNAGLDQISSFRKMMIYERPGDRFMVLLSAGNLSISQSVREMLQTEQLFDRDDNEPITIWN AKSMFDAARVLGSAVRHVHERDGAALKRSGVDFNVSLVFGGQIQGEGMRLFQVYSAGNFIEATPETPYFQVGESKYGKPV LDRVLTPDTPLDEAAKCALVSMDSTLKSNLSVGLPLDLVVYEAGRLSTDRIVCIDEQNPYFRMLRSSWGERLRQVFDSIE DPAWNGGATDVPILAEPARSQPLKKIGTPSDKLI
Specific function: Unknown
COG id: COG3484
COG function: function code O; Predicted proteasome-type protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30476; Mature: 30345
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYCVAIKLNAGLVFLSDSRTNAGLDQISSFRKMMIYERPGDRFMVLLSAGNLSISQSVR CEEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHEEEECCCCEEEEEEECCCCCHHHHHH EMLQTEQLFDRDDNEPITIWNAKSMFDAARVLGSAVRHVHERDGAALKRSGVDFNVSLVF HHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEEEE GGQIQGEGMRLFQVYSAGNFIEATPETPYFQVGESKYGKPVLDRVLTPDTPLDEAAKCAL CCEECCCCEEEEEEECCCCEEEECCCCCEEEECCCCCCCHHHHHHCCCCCCCCHHHHEEE VSMDSTLKSNLSVGLPLDLVVYEAGRLSTDRIVCIDEQNPYFRMLRSSWGERLRQVFDSI EECCHHHHCCCCCCCCEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH EDPAWNGGATDVPILAEPARSQPLKKIGTPSDKLI CCCCCCCCCCCCCEEECCCCCCCHHHHCCCCCCCC >Mature Secondary Structure TYCVAIKLNAGLVFLSDSRTNAGLDQISSFRKMMIYERPGDRFMVLLSAGNLSISQSVR EEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHEEEECCCCEEEEEEECCCCCHHHHHH EMLQTEQLFDRDDNEPITIWNAKSMFDAARVLGSAVRHVHERDGAALKRSGVDFNVSLVF HHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEEEE GGQIQGEGMRLFQVYSAGNFIEATPETPYFQVGESKYGKPVLDRVLTPDTPLDEAAKCAL CCEECCCCEEEEEEECCCCEEEECCCCCEEEECCCCCCCHHHHHHCCCCCCCCHHHHEEE VSMDSTLKSNLSVGLPLDLVVYEAGRLSTDRIVCIDEQNPYFRMLRSSWGERLRQVFDSI EECCHHHHCCCCCCCCEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH EDPAWNGGATDVPILAEPARSQPLKKIGTPSDKLI CCCCCCCCCCCCCEEECCCCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA