| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610709
Identifier: 120610709
GI number: 120610709
Start: 2211487
End: 2212179
Strand: Reverse
Name: 120610709
Synonym: Aave_2029
Alternate gene names: NA
Gene position: 2212179-2211487 (Counterclockwise)
Preceding gene: 120610711
Following gene: 120610708
Centisome position: 41.33
GC content: 62.77
Gene sequence:
>693_bases ATGCGGCAATCATTCGCAATGAAATCCATCTGGCTGGGCATCCCGGCAATTACCTTGGCCTTCTCGGCGCTTGCGGCCGA TGAGCCCACGCCGCTCACGCTGCCACTCGGCGCGCCCATGTCGGCCTACATGGCGAGTTCGGGCACGCAATCGGTTTACG GTGCCGGCACCGTGAACAACCAGGCAGGCAGCGGTACCGGCGTCACCGTGCGCGATCCCGCCGTACCCGTGACGTTCGAG GGCCAGCCCGCCCTGCGCAAGGACACGGTGATCACTCTGAACTTCCAGACGAGCAGTGGATCCTCCACGATCGCAAGTAC GCTCATCAATTACTACGACAACGACTATACGGCCCCGCGCGGCGCGGTAATCAGCGGCCTGTATTCAGTAACGGATGCCT CCCAGCCGCTGCCCGCCACCGCCAAGGCAGGCGACTCTGGCACCTGGTACACGATGAAGATCTATAACGACTCCACCAAG TCGCTGCAGCTGGGCACGGCAACGGTGAACTATTCGGTGCAGGCCGATACGGACTCCACTCTGCTGCTGTCGCTCGTTAC GACGGCGAAGCCAGTGCTGGGCACTCCCATCGTCAACACTTCCATCTACCGCCTCGGTGCGGCCGGCGCGGCTGTGCCAG TGAAAGAAGTCGCGACCAGCGCCGGCACGGACGTGCAAATCACGTACGAGTGA
Upstream 100 bases:
>100_bases GTGCGAAACGCGCACTGAGCCAAGGATGCGCTCATAGTCATGCACACGGAGCGTCGACACTTCCACACACACCTTCCATT CAACTCTTGCAAATTTGACC
Downstream 100 bases:
>100_bases TGCGAGCGGGCCGAAGGCCGCCTGGCGCGCGTCTCGACCCCTCTCCGCCCCATACTGCACTGCCGGCCGCGCGGCGCACA TCCAGTGCCGCCTCATGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MRQSFAMKSIWLGIPAITLAFSALAADEPTPLTLPLGAPMSAYMASSGTQSVYGAGTVNNQAGSGTGVTVRDPAVPVTFE GQPALRKDTVITLNFQTSSGSSTIASTLINYYDNDYTAPRGAVISGLYSVTDASQPLPATAKAGDSGTWYTMKIYNDSTK SLQLGTATVNYSVQADTDSTLLLSLVTTAKPVLGTPIVNTSIYRLGAAGAAVPVKEVATSAGTDVQITYE
Sequences:
>Translated_230_residues MRQSFAMKSIWLGIPAITLAFSALAADEPTPLTLPLGAPMSAYMASSGTQSVYGAGTVNNQAGSGTGVTVRDPAVPVTFE GQPALRKDTVITLNFQTSSGSSTIASTLINYYDNDYTAPRGAVISGLYSVTDASQPLPATAKAGDSGTWYTMKIYNDSTK SLQLGTATVNYSVQADTDSTLLLSLVTTAKPVLGTPIVNTSIYRLGAAGAAVPVKEVATSAGTDVQITYE >Mature_230_residues MRQSFAMKSIWLGIPAITLAFSALAADEPTPLTLPLGAPMSAYMASSGTQSVYGAGTVNNQAGSGTGVTVRDPAVPVTFE GQPALRKDTVITLNFQTSSGSSTIASTLINYYDNDYTAPRGAVISGLYSVTDASQPLPATAKAGDSGTWYTMKIYNDSTK SLQLGTATVNYSVQADTDSTLLLSLVTTAKPVLGTPIVNTSIYRLGAAGAAVPVKEVATSAGTDVQITYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23764; Mature: 23764
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQSFAMKSIWLGIPAITLAFSALAADEPTPLTLPLGAPMSAYMASSGTQSVYGAGTVNN CCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHCCCCCCEEECCCCCC QAGSGTGVTVRDPAVPVTFEGQPALRKDTVITLNFQTSSGSSTIASTLINYYDNDYTAPR CCCCCCCEEEECCCEEEEECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCC GAVISGLYSVTDASQPLPATAKAGDSGTWYTMKIYNDSTKSLQLGTATVNYSVQADTDST CHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEEEEECCCCE LLLSLVTTAKPVLGTPIVNTSIYRLGAAGAAVPVKEVATSAGTDVQITYE EEEEHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCEEEEEEC >Mature Secondary Structure MRQSFAMKSIWLGIPAITLAFSALAADEPTPLTLPLGAPMSAYMASSGTQSVYGAGTVNN CCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHCCCCCCEEECCCCCC QAGSGTGVTVRDPAVPVTFEGQPALRKDTVITLNFQTSSGSSTIASTLINYYDNDYTAPR CCCCCCCEEEECCCEEEEECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCC GAVISGLYSVTDASQPLPATAKAGDSGTWYTMKIYNDSTKSLQLGTATVNYSVQADTDST CHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEEEEECCCCE LLLSLVTTAKPVLGTPIVNTSIYRLGAAGAAVPVKEVATSAGTDVQITYE EEEEHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA