| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is ascD [H]
Identifier: 120610657
GI number: 120610657
Start: 2146151
End: 2147224
Strand: Reverse
Name: ascD [H]
Synonym: Aave_1977
Alternate gene names: 120610657
Gene position: 2147224-2146151 (Counterclockwise)
Preceding gene: 120610659
Following gene: 120610655
Centisome position: 40.11
GC content: 69.83
Gene sequence:
>1074_bases ATGAACACCGCAGCGACGGCCGCAGCCTCCCACCAGATCACCGTGCAGCCCAGCGGCCGCGCCTTCACCGCCCAGGCCGG CGAAACCCTGCTGGGCGCTGCCATCCGCAGCGGCGTGGGCCTGCCCTACGGCTGCAAGGACGGCGCCTGCGGTTCCTGCA AATGCCGCAAGCTGAGCGGTTCGGTCGCGCACGGAGAGCACCAGTCCAAAGCCCTGACGCCCGAGGAGGCCGACGCGGGT TTCGTGCTCACCTGCTGCGCGCAGCCGCTCACCGACGTGGTGCTGGAGTCGCGCCAGGTCACCGACGAAAGCGCCTACCC CATCAAGAAGATGCCGGTGCGCGTCGCCGCCCTCGCGCGCGCCTCGCACGACGTGATGGTGGTTCGCCTGCAGCTGCCCG CGGCCGACACGTTCCGCTACCACGCAGGCCAGTACGTGGAGTTCATCCTCAAGGACGGCGCACGCCGCGCTTATTCGATG GCCAATGCGCCGCACACGCAGGAGGGCAGCCCGGGCATCGAGCTGCACATCCGCCACATGCCGGGCGGCCGGTTCACCGA CCACGTGTTCGGCGCCATGAAGGAAAAGGAAATCCTGCGCGTGGAGGGCCCGTTCGGCAGCTTCTTCCTGCGCGAGGACA GCCCCAAACCGATCATCCTGCTGGCCTCGGGCACGGGCTTCGCGCCGGTGAAGGCGCTCATCGAGCACCTGCGCTTCAAG GGCATCGACCGCCCTGTCACGCTCTACTGGGGCGGCCGCCGGCCGGCGGACCTCTACATGGATGCCTGGGTCCGCGAGCG CCTGGCGGACATGCCCGGGCTGCGCTACGTGCCGGTGGTGTCGCACGCCCTGCCGGAAGACGGCTGGACCGGCCGCACGG GTTTCGTGCACCAGGCCGTGATGGACGATCACGCCGACCTGTCGGGACACCAGGTGTATGCCTGCGGGGCGCCGGTGGTG GTGGAATCGGCGCGCAAGGCCTACAGTGCCGAGCGCGGCTTGCCCCCGGAAGAGTTCTACGCGGACGCCTTCACGTCCGA GGCGGACAAGCACGGCGGCACCGTCGCCTCCTGA
Upstream 100 bases:
>100_bases CGTTCACGGCGGAAACGCGCCGGCAGCGCGCCGAGGGGGTTCAGGTTTGAGGGCAAAATCCAGATCCGGCAACGAAGAGA CACGCAAGGATAACGACCCC
Downstream 100 bases:
>100_bases ACGGCGCGCGTCCCGGCAGGGCCCGGGCCGGCCGGACTGGAAGCCAGGTTCAGCCCATCGTGCGGCAGAGTTCCGCGCAG CGCCGGCACATGGCGGCGCA
Product: CDP-6-deoxy-delta-3,4-glucoseen reductase
Products: NAD(P); FMNH2; 2-octaprenyl-6-hydroxyphenol [C]
Alternate protein names: CDP-6-deoxy-delta-3,4-glucoseen reductase; E3 [H]
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MNTAATAAASHQITVQPSGRAFTAQAGETLLGAAIRSGVGLPYGCKDGACGSCKCRKLSGSVAHGEHQSKALTPEEADAG FVLTCCAQPLTDVVLESRQVTDESAYPIKKMPVRVAALARASHDVMVVRLQLPAADTFRYHAGQYVEFILKDGARRAYSM ANAPHTQEGSPGIELHIRHMPGGRFTDHVFGAMKEKEILRVEGPFGSFFLREDSPKPIILLASGTGFAPVKALIEHLRFK GIDRPVTLYWGGRRPADLYMDAWVRERLADMPGLRYVPVVSHALPEDGWTGRTGFVHQAVMDDHADLSGHQVYACGAPVV VESARKAYSAERGLPPEEFYADAFTSEADKHGGTVAS
Sequences:
>Translated_357_residues MNTAATAAASHQITVQPSGRAFTAQAGETLLGAAIRSGVGLPYGCKDGACGSCKCRKLSGSVAHGEHQSKALTPEEADAG FVLTCCAQPLTDVVLESRQVTDESAYPIKKMPVRVAALARASHDVMVVRLQLPAADTFRYHAGQYVEFILKDGARRAYSM ANAPHTQEGSPGIELHIRHMPGGRFTDHVFGAMKEKEILRVEGPFGSFFLREDSPKPIILLASGTGFAPVKALIEHLRFK GIDRPVTLYWGGRRPADLYMDAWVRERLADMPGLRYVPVVSHALPEDGWTGRTGFVHQAVMDDHADLSGHQVYACGAPVV VESARKAYSAERGLPPEEFYADAFTSEADKHGGTVAS >Mature_357_residues MNTAATAAASHQITVQPSGRAFTAQAGETLLGAAIRSGVGLPYGCKDGACGSCKCRKLSGSVAHGEHQSKALTPEEADAG FVLTCCAQPLTDVVLESRQVTDESAYPIKKMPVRVAALARASHDVMVVRLQLPAADTFRYHAGQYVEFILKDGARRAYSM ANAPHTQEGSPGIELHIRHMPGGRFTDHVFGAMKEKEILRVEGPFGSFFLREDSPKPIILLASGTGFAPVKALIEHLRFK GIDRPVTLYWGGRRPADLYMDAWVRERLADMPGLRYVPVVSHALPEDGWTGRTGFVHQAVMDDHADLSGHQVYACGAPVV VESARKAYSAERGLPPEEFYADAFTSEADKHGGTVAS
Specific function: Participates in the conversion of CDP-6-deoxy-D-glycero- L-threo-4-hexulose to 3,6-dideoxy-D-glycero-D-glycero-4-hexulose together with CDP-6-deoxy-D-glycero-L-threo-4-hexulose-3-dehydrase (E1) in two consecutive steps. The detailed mechanism of E3 is not
COG id: COG0543
COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Escherichia coli, GI2367314, Length=237, Percent_Identity=32.4894514767932, Blast_Score=125, Evalue=5e-30, Organism=Escherichia coli, GI1787658, Length=90, Percent_Identity=44.4444444444444, Blast_Score=72, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6322699, Length=243, Percent_Identity=24.2798353909465, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR017927 - InterPro: IPR001041 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR001221 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]
EC number: 1.5.1.29 [C]
Molecular weight: Translated: 38499; Mature: 38499
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTAATAAASHQITVQPSGRAFTAQAGETLLGAAIRSGVGLPYGCKDGACGSCKCRKLSG CCCCCCCCCCCEEEECCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCC SVAHGEHQSKALTPEEADAGFVLTCCAQPLTDVVLESRQVTDESAYPIKKMPVRVAALAR CCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHH ASHDVMVVRLQLPAADTFRYHAGQYVEFILKDGARRAYSMANAPHTQEGSPGIELHIRHM CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCEEEEEEEC PGGRFTDHVFGAMKEKEILRVEGPFGSFFLREDSPKPIILLASGTGFAPVKALIEHLRFK CCCCCHHHHHHHHCCCCEEEEECCCCCEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHC GIDRPVTLYWGGRRPADLYMDAWVRERLADMPGLRYVPVVSHALPEDGWTGRTGFVHQAV CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHCCCCCCCCCCCHHHHHH MDDHADLSGHQVYACGAPVVVESARKAYSAERGLPPEEFYADAFTSEADKHGGTVAS HCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNTAATAAASHQITVQPSGRAFTAQAGETLLGAAIRSGVGLPYGCKDGACGSCKCRKLSG CCCCCCCCCCCEEEECCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCC SVAHGEHQSKALTPEEADAGFVLTCCAQPLTDVVLESRQVTDESAYPIKKMPVRVAALAR CCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHH ASHDVMVVRLQLPAADTFRYHAGQYVEFILKDGARRAYSMANAPHTQEGSPGIELHIRHM CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCEEEEEEEC PGGRFTDHVFGAMKEKEILRVEGPFGSFFLREDSPKPIILLASGTGFAPVKALIEHLRFK CCCCCHHHHHHHHCCCCEEEEECCCCCEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHC GIDRPVTLYWGGRRPADLYMDAWVRERLADMPGLRYVPVVSHALPEDGWTGRTGFVHQAV CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHCCCCCCCCCCCHHHHHH MDDHADLSGHQVYACGAPVVVESARKAYSAERGLPPEEFYADAFTSEADKHGGTVAS HCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NAD(P)H2; FMN [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NAD(P)H2; FMN; 2 2-octaprenylphenol; O2 [C]
Specific reaction: NAD(P)H2 + FMN = NAD(P) + FMNH2 2 2-octaprenylphenol + O2 = 2 2-octaprenyl-6-hydroxyphenol [C]
General reaction: Oxidoreductases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10931327; 11586360; 12142430 [H]