| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610631
Identifier: 120610631
GI number: 120610631
Start: 2113914
End: 2114720
Strand: Direct
Name: 120610631
Synonym: Aave_1951
Alternate gene names: NA
Gene position: 2113914-2114720 (Clockwise)
Preceding gene: 120610630
Following gene: 120610633
Centisome position: 39.49
GC content: 70.51
Gene sequence:
>807_bases ATGTCCCTGAGCCTTTCCCGCCGTTTCCGTCCTGGCCGCGTTGCCGCGGCCGTGCTCTGCGCAGTGCTTTTGCCGGCCGC TGCCGCCTGGGCCGCGCCCACGCCGGCACCCTCGGCGGCGGTCGCGCTTCCCGCGCCCTATGCGCGCTGGCAGTCGAGCA TGGACGCCTTCGCGGCCGCGGACAAGGCCGGCCTGCCGAAGGCGGGCGGCGTGCTCTTCGTCGGCAGCTCGACCATTCGC CTCTGGACCGACCTGCGCGAGGATTTCCGGCAACTGCCCGTGGTCATCAACCGCGGGTTTGGCGGCTCGACCATGGCCGA CTGCCAGTACTTCGTGAAAAACCTCGTGTTGCAGTACCAGCCCCGCCATGTGATGGTGTATGCGGGCGACAACGACCTGG CGGAAGGGCGTACGCCCGAGCAGGTGCTCGAGAGCTTCCAGTCCTTCGTGCGCTCGGTGCGCGAGGCGCTGCCCGACACG CGCATCAGCTACATCTCCATCAAGCCCAGCCCGCTGCGGCTGTCGCTGCTGCCGCGCATGCGCGAGGCCAACGCCCTGCT GGCGCAGTACGTGCGCACGGTGCCCAACAGCGATTTCATCGACATCTTCACCCCCATGCTGGATGCGCAGGGCCTGCCGC GCGCCGAGCTGTTCGGGGCCGACCACCTGCACATGAACGACGCAGGCTACGACCTCTGGCGCGCCGTCATCGGCAGCTAC GTGGGCGACGGCGCAGTGTCCGCGGGCGGCGCCACGGCCGCCCGGCCGGGTACGGACGGGCTCATCCGGGCCAGCGCGCG GCCCTGA
Upstream 100 bases:
>100_bases TTGTAACTTTGGCGACTCAATTTGTAAAAATTGTGTTCCAAAGGGAATGGTGCGGCAGACAATCGATCACACGCTTCTGC TTTCTCGGAGTGACCCGCCC
Downstream 100 bases:
>100_bases CTTTCCCCCACGCTACAGCGCCGGGGGCAGGGGCCTCCGCAGGCGCAGCAGCCTGCGGCGGGTGCCCGGCGCATCCTCGT CCGGCCCCTTGTCCCACCAC
Product: GDSL family lipase
Products: NA
Alternate protein names: Lipolytic Protein G-D-S-L Family; Esterase/Lipase-Like Protein; Acyl-CoA Thioesterase; Lipase/Acylhydrolase; Lysophospholipase; Lipolytic; Signal Peptide; Secreted Protein
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSLSLSRRFRPGRVAAAVLCAVLLPAAAAWAAPTPAPSAAVALPAPYARWQSSMDAFAAADKAGLPKAGGVLFVGSSTIR LWTDLREDFRQLPVVINRGFGGSTMADCQYFVKNLVLQYQPRHVMVYAGDNDLAEGRTPEQVLESFQSFVRSVREALPDT RISYISIKPSPLRLSLLPRMREANALLAQYVRTVPNSDFIDIFTPMLDAQGLPRAELFGADHLHMNDAGYDLWRAVIGSY VGDGAVSAGGATAARPGTDGLIRASARP
Sequences:
>Translated_268_residues MSLSLSRRFRPGRVAAAVLCAVLLPAAAAWAAPTPAPSAAVALPAPYARWQSSMDAFAAADKAGLPKAGGVLFVGSSTIR LWTDLREDFRQLPVVINRGFGGSTMADCQYFVKNLVLQYQPRHVMVYAGDNDLAEGRTPEQVLESFQSFVRSVREALPDT RISYISIKPSPLRLSLLPRMREANALLAQYVRTVPNSDFIDIFTPMLDAQGLPRAELFGADHLHMNDAGYDLWRAVIGSY VGDGAVSAGGATAARPGTDGLIRASARP >Mature_267_residues SLSLSRRFRPGRVAAAVLCAVLLPAAAAWAAPTPAPSAAVALPAPYARWQSSMDAFAAADKAGLPKAGGVLFVGSSTIRL WTDLREDFRQLPVVINRGFGGSTMADCQYFVKNLVLQYQPRHVMVYAGDNDLAEGRTPEQVLESFQSFVRSVREALPDTR ISYISIKPSPLRLSLLPRMREANALLAQYVRTVPNSDFIDIFTPMLDAQGLPRAELFGADHLHMNDAGYDLWRAVIGSYV GDGAVSAGGATAARPGTDGLIRASARP
Specific function: Unknown
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28831; Mature: 28700
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSLSRRFRPGRVAAAVLCAVLLPAAAAWAAPTPAPSAAVALPAPYARWQSSMDAFAAA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHH DKAGLPKAGGVLFVGSSTIRLWTDLREDFRQLPVVINRGFGGSTMADCQYFVKNLVLQYQ HHCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHEEC PRHVMVYAGDNDLAEGRTPEQVLESFQSFVRSVREALPDTRISYISIKPSPLRLSLLPRM CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEHHHHHH REANALLAQYVRTVPNSDFIDIFTPMLDAQGLPRAELFGADHLHMNDAGYDLWRAVIGSY HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHCCCCCEEECCCHHHHHHHHHHHH VGDGAVSAGGATAARPGTDGLIRASARP HCCCCCCCCCCCCCCCCCCCEEECCCCC >Mature Secondary Structure SLSLSRRFRPGRVAAAVLCAVLLPAAAAWAAPTPAPSAAVALPAPYARWQSSMDAFAAA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHH DKAGLPKAGGVLFVGSSTIRLWTDLREDFRQLPVVINRGFGGSTMADCQYFVKNLVLQYQ HHCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHEEC PRHVMVYAGDNDLAEGRTPEQVLESFQSFVRSVREALPDTRISYISIKPSPLRLSLLPRM CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEHHHHHH REANALLAQYVRTVPNSDFIDIFTPMLDAQGLPRAELFGADHLHMNDAGYDLWRAVIGSY HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHCCCCCEEECCCHHHHHHHHHHHH VGDGAVSAGGATAARPGTDGLIRASARP HCCCCCCCCCCCCCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA