| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610621
Identifier: 120610621
GI number: 120610621
Start: 2103131
End: 2103574
Strand: Reverse
Name: 120610621
Synonym: Aave_1941
Alternate gene names: NA
Gene position: 2103574-2103131 (Counterclockwise)
Preceding gene: 120610622
Following gene: 120610620
Centisome position: 39.3
GC content: 73.87
Gene sequence:
>444_bases ATGACCACCGATCCGCAAGCCCTCTATCCCCTGACCCTCTACTTCGACTCCCGCTGCCAGCTCTGCCGGGCGGAGATGAC CAACCTGCGGCTGCGCGACCGGGCCGGGCTGCTGCGGTTCGCGGACGTGTGGGCGCCCGGCTTCGAAGGCCCGCCGGGCA CCACGCACGAGCAATTGCTGACGCTGATCCATGCCCGCACCGCGGATGGACGGGTGCTGCGCGGCGTGGAGGTGTTCCGC CGCGCTTATGCGGCCGTGGGCCTGGGCTGGGTCATGGCGGCCACGCGCCTGCCGGTGCTGGGCCCGCTCGCGGACCGGCT CTACCCGGTGCTGGCGCGCAACCGCTACCGCCTGCCGCGCTGGCTGGTGGGCGGCCTGTTCGAACGCGCGAGCCGACGCG CGGCCCTGCGGCGGTGCGCGCCCGGCGACCGCTGCGACCTTTGA
Upstream 100 bases:
>100_bases CGTTTCTCGCGCCTTTTTACGCCCCTCATTTCATTCCGTACAGAAATTTAAAAAGCAGAGAAAACCCAACGGCAGCCAAC CATTTTCCCAGGAGCCCGCC
Downstream 100 bases:
>100_bases GGAGATCCACCATGCAAATCCTCATCACCGGCGCGACCGGGTTCATCGGCCGGCACGTCGCCGCCCGGCTGCGCTCGGAA GGCCACACGGTCCACGAAGG
Product: putative thiol-disulfide oxidoreductase DCC
Products: NA
Alternate protein names: Thiol-Disulfide Oxidoreductase DCC; Potential Redox Protein; Inhibitor
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MTTDPQALYPLTLYFDSRCQLCRAEMTNLRLRDRAGLLRFADVWAPGFEGPPGTTHEQLLTLIHARTADGRVLRGVEVFR RAYAAVGLGWVMAATRLPVLGPLADRLYPVLARNRYRLPRWLVGGLFERASRRAALRRCAPGDRCDL
Sequences:
>Translated_147_residues MTTDPQALYPLTLYFDSRCQLCRAEMTNLRLRDRAGLLRFADVWAPGFEGPPGTTHEQLLTLIHARTADGRVLRGVEVFR RAYAAVGLGWVMAATRLPVLGPLADRLYPVLARNRYRLPRWLVGGLFERASRRAALRRCAPGDRCDL >Mature_146_residues TTDPQALYPLTLYFDSRCQLCRAEMTNLRLRDRAGLLRFADVWAPGFEGPPGTTHEQLLTLIHARTADGRVLRGVEVFRR AYAAVGLGWVMAATRLPVLGPLADRLYPVLARNRYRLPRWLVGGLFERASRRAALRRCAPGDRCDL
Specific function: Unknown
COG id: COG3011
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16608; Mature: 16476
Theoretical pI: Translated: 10.95; Mature: 10.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDPQALYPLTLYFDSRCQLCRAEMTNLRLRDRAGLLRFADVWAPGFEGPPGTTHEQLL CCCCCCCCEEEEEEECCHHHHHHHHHHCCHHHHHHCHHHHHHHCCCCCCCCCCCCHHHHH TLIHARTADGRVLRGVEVFRRAYAAVGLGWVMAATRLPVLGPLADRLYPVLARNRYRLPR HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHH WLVGGLFERASRRAALRRCAPGDRCDL HHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TTDPQALYPLTLYFDSRCQLCRAEMTNLRLRDRAGLLRFADVWAPGFEGPPGTTHEQLL CCCCCCCEEEEEEECCHHHHHHHHHHCCHHHHHHCHHHHHHHCCCCCCCCCCCCHHHHH TLIHARTADGRVLRGVEVFRRAYAAVGLGWVMAATRLPVLGPLADRLYPVLARNRYRLPR HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHH WLVGGLFERASRRAALRRCAPGDRCDL HHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA