| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610582
Identifier: 120610582
GI number: 120610582
Start: 2061459
End: 2061743
Strand: Direct
Name: 120610582
Synonym: Aave_1902
Alternate gene names: NA
Gene position: 2061459-2061743 (Clockwise)
Preceding gene: 120610581
Following gene: 120610583
Centisome position: 38.51
GC content: 72.98
Gene sequence:
>285_bases ATGGCCAATGACCCAACGAACGAACGCGACACGGGCAAGCAAGCACAGGCGGAAGAGGCGCTGAAGCAGGGAGCCCGCCG TGCCGGTCCGGCCCGGCGGGGGTTCGCGGGCATGGACCCGGCCCGCCAGCGCGAGATCGCGTCCCTGGGCGGGCGCGCGG CCCACGCCAGCGGCAACGCCCACCAGTTCACGTCGGAAGAAGCCCGCGAGGCTGGCCGCAAGAGCCATCGCAAGTCCGCG GCATCCAGCGGCGCTGGCGCTAGCGCAGGCGCTGCCTCGTCCTGA
Upstream 100 bases:
>100_bases GTCGGGCATGCCGATTGCCCTGAGTCATTGCGTAGGCCCGGCCGCTGCGGCGCCGGACTGCAAATTCCATCCATTTCCAT TTTGTTGAGAGGAGCGGTAC
Downstream 100 bases:
>100_bases GGTGTGCGTGCCGGTGCCGGCATCGCCGGCTCCGGGGGCATCCGGGCCCGCCTTCATGGCGGGCTTTTTTCATGGGCGAA GGCTGTATGTCGGAAAGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MANDPTNERDTGKQAQAEEALKQGARRAGPARRGFAGMDPARQREIASLGGRAAHASGNAHQFTSEEAREAGRKSHRKSA ASSGAGASAGAASS
Sequences:
>Translated_94_residues MANDPTNERDTGKQAQAEEALKQGARRAGPARRGFAGMDPARQREIASLGGRAAHASGNAHQFTSEEAREAGRKSHRKSA ASSGAGASAGAASS >Mature_93_residues ANDPTNERDTGKQAQAEEALKQGARRAGPARRGFAGMDPARQREIASLGGRAAHASGNAHQFTSEEAREAGRKSHRKSAA SSGAGASAGAASS
Specific function: Unknown
COG id: COG3729
COG function: function code R; General stress protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9573; Mature: 9442
Theoretical pI: Translated: 11.40; Mature: 11.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANDPTNERDTGKQAQAEEALKQGARRAGPARRGFAGMDPARQREIASLGGRAAHASGNA CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC HQFTSEEAREAGRKSHRKSAASSGAGASAGAASS CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure ANDPTNERDTGKQAQAEEALKQGARRAGPARRGFAGMDPARQREIASLGGRAAHASGNA CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC HQFTSEEAREAGRKSHRKSAASSGAGASAGAASS CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA