| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610560
Identifier: 120610560
GI number: 120610560
Start: 2038415
End: 2039062
Strand: Direct
Name: 120610560
Synonym: Aave_1880
Alternate gene names: NA
Gene position: 2038415-2039062 (Clockwise)
Preceding gene: 120610558
Following gene: 120610561
Centisome position: 38.08
GC content: 61.88
Gene sequence:
>648_bases ATGTTGTTTGGAAAGCTGTTGCCCCGCGAGGGCAATTTTTTCGAGATGTTCAACCAGCATGCGGACCGCATCGTCGAGGC TGCGAGGGCCTTCTCCCAACTGGTCGCCAACTACAACGACCCGCACCTGCGCGACAAGTACAACCAGGACGTGGACAACG CCGAGCGGGCTGCGGACCGCGTGACGCACGAGGTCAACCGCACGCTCCACAAGACCTTCATCACGCCGATCGACCGCGAG CAGATCCATTCGCTCATCAACACGATGGACGACGTGGCCGACCTGATCCAGGATTCGGCCGAAACCATGGCGCTCTATGA CGTGCGCCACATGACCGAAGAGATCAGCCGACTGACGGACCTGAGCCTGAAGTGCTGCGAGCGGCTGCGCGATGCCGTCA AGCTGCTGGAGAAGATCGCCGATCCGGGCGTGGCCGAGGCGGCGCTCAAGACCTGCGAGGAAATCGACCGCCTGGAAAGC GACGCCGACCGCGTCATGCGCAGCGCCATGAGCAAGCTCTTCCGCGAAGAGCCCGACGTGCGCGAGGTGCTCAAGCTCAA GGCCATCTACGAGCTGCTGGAAACCATCACCGACAAGTGCGAGGACGTGGCCAACCACATCGAGGGCATCATCCTCGAGA ACTCCTGA
Upstream 100 bases:
>100_bases CGCGGTTAAACTCGCGCCTTTCTTGAAATCGTCACCATTTCGTCACAATCGCGGCCACGCCGCAGGTGGCGCATGCCTGC CAGTCGTCCAGGAGTCCCCC
Downstream 100 bases:
>100_bases TCCGCGGCGGACGCAAGCGCTCAAAGCATGGAAACCGTACAAACCGCCCTGTGGGTCGTCGCCCTCCTGGTCGCGCTCGC CATCCTGTTCGATTTCATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MLFGKLLPREGNFFEMFNQHADRIVEAARAFSQLVANYNDPHLRDKYNQDVDNAERAADRVTHEVNRTLHKTFITPIDRE QIHSLINTMDDVADLIQDSAETMALYDVRHMTEEISRLTDLSLKCCERLRDAVKLLEKIADPGVAEAALKTCEEIDRLES DADRVMRSAMSKLFREEPDVREVLKLKAIYELLETITDKCEDVANHIEGIILENS
Sequences:
>Translated_215_residues MLFGKLLPREGNFFEMFNQHADRIVEAARAFSQLVANYNDPHLRDKYNQDVDNAERAADRVTHEVNRTLHKTFITPIDRE QIHSLINTMDDVADLIQDSAETMALYDVRHMTEEISRLTDLSLKCCERLRDAVKLLEKIADPGVAEAALKTCEEIDRLES DADRVMRSAMSKLFREEPDVREVLKLKAIYELLETITDKCEDVANHIEGIILENS >Mature_215_residues MLFGKLLPREGNFFEMFNQHADRIVEAARAFSQLVANYNDPHLRDKYNQDVDNAERAADRVTHEVNRTLHKTFITPIDRE QIHSLINTMDDVADLIQDSAETMALYDVRHMTEEISRLTDLSLKCCERLRDAVKLLEKIADPGVAEAALKTCEEIDRLES DADRVMRSAMSKLFREEPDVREVLKLKAIYELLETITDKCEDVANHIEGIILENS
Specific function: Could be involved in orthophosphate transport [H]
COG id: COG1392
COG function: function code P; Phosphate transport regulator (distant homolog of PhoU)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0111 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018445 [H]
Pfam domain/function: PF01865 PhoU_div [H]
EC number: NA
Molecular weight: Translated: 24732; Mature: 24732
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFGKLLPREGNFFEMFNQHADRIVEAARAFSQLVANYNDPHLRDKYNQDVDNAERAADR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHH VTHEVNRTLHKTFITPIDREQIHSLINTMDDVADLIQDSAETMALYDVRHMTEEISRLTD HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSLKCCERLRDAVKLLEKIADPGVAEAALKTCEEIDRLESDADRVMRSAMSKLFREEPDV HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH REVLKLKAIYELLETITDKCEDVANHIEGIILENS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLFGKLLPREGNFFEMFNQHADRIVEAARAFSQLVANYNDPHLRDKYNQDVDNAERAADR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHH VTHEVNRTLHKTFITPIDREQIHSLINTMDDVADLIQDSAETMALYDVRHMTEEISRLTD HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSLKCCERLRDAVKLLEKIADPGVAEAALKTCEEIDRLESDADRVMRSAMSKLFREEPDV HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH REVLKLKAIYELLETITDKCEDVANHIEGIILENS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9696772; 11481430 [H]