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The map label for this gene is dadA [H]

Identifier: 120610502

GI number: 120610502

Start: 1976100

End: 1977347

Strand: Reverse

Name: dadA [H]

Synonym: Aave_1822

Alternate gene names: 120610502

Gene position: 1977347-1976100 (Counterclockwise)

Preceding gene: 120610519

Following gene: 120610501

Centisome position: 36.94

GC content: 76.04

Gene sequence:

>1248_bases
ATGCACATCGCCATCGTCGGTGCCGGAATCGTCGGCACCGCCACCGCTTATGAACTGGCCTGCGACGGGCACGCCGTCAC
TGTCTTCGAGCAGCGCGGCGCCGCCGCCGAGGAGGCCAGCTTCGCCAACGCGGGCCTGCTCGCCCCCGCGCCCCTGATTC
CCTGGGCATCGCCGGCTGTCGGCGGCCCTGCCCGGCAGAGGCTCCTGGGCCGGCACGCCGCCGTCCGCCTGGCCCAGGGG
GCCGGGCTCGCCGACCTGCGCTGGCTGTGGCGCCGCCGCCGGGCGGCGCGCGGCGGCATGGCCGAGTCCTCCGTCGCCGC
GCTGGCCCGGTTCGGTCACTACAGCCACATCCGCATGCGGCAGGTGGCGCAGGCCCTGGACCTCGACCCGGAAAGCAGCC
GCGGCGTGCTGGTGCTGCTGCGCGCGCCCGCCGACCTGGACCGGGTGCAGCCGGCCGCACGCATCCTGCGGGAGGCCGGG
CTGAACGTGCTCGACGTGGATGCCGATACCGCCCGCCTCATCGAACCCGGGCTGGCGTCGGACAACGAGCTGGCGGGCGC
GCTGCATCTGCCGGACGGCGAATCCGGCAATTGCCGCCTCTTCGCCCAGATGCTGCGCTACGCCGCCCAGGAGCGCGGCG
TGCAGTTCCTGTTCCAGTCGCGCGTGGAGGCACTGCAGGGAGGTCCGGCCGGCGTGCGGCTGGCCGGCGAACGCGACGCA
CGCCGTTTCGACGCGGTGGTGGTGTGCGCGGGCGTGTCGGCCGCCGCCCTGCTGCGGGGCACCGGCACCGCGATGCCGCT
GGCGGCGCTGCACGGCTACACCCTGAGCGCCCCCGTGCGCGAGGACACCCACGCCCCGCAGGGCACGGTGATCGACCCGC
TGCACCGCATCACCGTCACCCGGCAGGGGCAGCGGGTGCGGGTGGCCGGCGGGGCGGAACTGGGCCCCGGCGGCGGCGCG
CCCCATGCCCCCACCTTGCAGACGCTCTACAACGCGGCATCGGGCTGGTTCCCCGGCGGTGCGCAGTGGTCATCGCCGCA
GGTACAGACCTGGCGCGGCGCGCGGCCCATGCTTCCGGACGGGCTGCCGGTGGTCGGCGCCGCCGGCGCGCCCGGTGTGT
GGATCAATGCCGGGCACGGCGCGTGCGGCTGGGCCCTGGCCTGCGGCAGCGCCCGCGCGGTGGCCGACCTGGTCGCCCAG
CGGGTGCCGGAGACGGACCTGCAGCCCTTCGGCCTGCGCAGGTTCTGA

Upstream 100 bases:

>100_bases
GCCATCCGCTCCCCCGCGGCGGAGCGGATGGCGTCCGCGGCCCTTCCAGAACCCCAGAAGCGGGTCCGCCCCGGCCCACC
GGAGGCGGCCCCCACCCACC

Downstream 100 bases:

>100_bases
CCGGCGCGGCGCGGGCCACGGAGCGGGCCACAATGGCCTCCCGAAGGAAGGCCTGCCGCATGTCCATGATCCGCATCGAA
CCCGACCGTCCCCATCCCCT

Product: D-amino-acid dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MHIAIVGAGIVGTATAYELACDGHAVTVFEQRGAAAEEASFANAGLLAPAPLIPWASPAVGGPARQRLLGRHAAVRLAQG
AGLADLRWLWRRRRAARGGMAESSVAALARFGHYSHIRMRQVAQALDLDPESSRGVLVLLRAPADLDRVQPAARILREAG
LNVLDVDADTARLIEPGLASDNELAGALHLPDGESGNCRLFAQMLRYAAQERGVQFLFQSRVEALQGGPAGVRLAGERDA
RRFDAVVVCAGVSAAALLRGTGTAMPLAALHGYTLSAPVREDTHAPQGTVIDPLHRITVTRQGQRVRVAGGAELGPGGGA
PHAPTLQTLYNAASGWFPGGAQWSSPQVQTWRGARPMLPDGLPVVGAAGAPGVWINAGHGACGWALACGSARAVADLVAQ
RVPETDLQPFGLRRF

Sequences:

>Translated_415_residues
MHIAIVGAGIVGTATAYELACDGHAVTVFEQRGAAAEEASFANAGLLAPAPLIPWASPAVGGPARQRLLGRHAAVRLAQG
AGLADLRWLWRRRRAARGGMAESSVAALARFGHYSHIRMRQVAQALDLDPESSRGVLVLLRAPADLDRVQPAARILREAG
LNVLDVDADTARLIEPGLASDNELAGALHLPDGESGNCRLFAQMLRYAAQERGVQFLFQSRVEALQGGPAGVRLAGERDA
RRFDAVVVCAGVSAAALLRGTGTAMPLAALHGYTLSAPVREDTHAPQGTVIDPLHRITVTRQGQRVRVAGGAELGPGGGA
PHAPTLQTLYNAASGWFPGGAQWSSPQVQTWRGARPMLPDGLPVVGAAGAPGVWINAGHGACGWALACGSARAVADLVAQ
RVPETDLQPFGLRRF
>Mature_415_residues
MHIAIVGAGIVGTATAYELACDGHAVTVFEQRGAAAEEASFANAGLLAPAPLIPWASPAVGGPARQRLLGRHAAVRLAQG
AGLADLRWLWRRRRAARGGMAESSVAALARFGHYSHIRMRQVAQALDLDPESSRGVLVLLRAPADLDRVQPAARILREAG
LNVLDVDADTARLIEPGLASDNELAGALHLPDGESGNCRLFAQMLRYAAQERGVQFLFQSRVEALQGGPAGVRLAGERDA
RRFDAVVVCAGVSAAALLRGTGTAMPLAALHGYTLSAPVREDTHAPQGTVIDPLHRITVTRQGQRVRVAGGAELGPGGGA
PHAPTLQTLYNAASGWFPGGAQWSSPQVQTWRGARPMLPDGLPVVGAAGAPGVWINAGHGACGWALACGSARAVADLVAQ
RVPETDLQPFGLRRF

Specific function: Oxidative deamination of D-amino acids [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=420, Percent_Identity=31.4285714285714, Blast_Score=217, Evalue=1e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 43325; Mature: 43325

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIAIVGAGIVGTATAYELACDGHAVTVFEQRGAAAEEASFANAGLLAPAPLIPWASPAV
CEEEEEECCHHHCCCEEEEEECCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCC
GGPARQRLLGRHAAVRLAQGAGLADLRWLWRRRRAARGGMAESSVAALARFGHYSHIRMR
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHH
QVAQALDLDPESSRGVLVLLRAPADLDRVQPAARILREAGLNVLDVDADTARLIEPGLAS
HHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHCCCCCC
DNELAGALHLPDGESGNCRLFAQMLRYAAQERGVQFLFQSRVEALQGGPAGVRLAGERDA
CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCH
RRFDAVVVCAGVSAAALLRGTGTAMPLAALHGYTLSAPVREDTHAPQGTVIDPLHRITVT
HHHCEEEEECCCHHHHHHHCCCCCCHHHHHCCCEEECCCCCCCCCCCCCEECCHHHEEEE
RQGQRVRVAGGAELGPGGGAPHAPTLQTLYNAASGWFPGGAQWSSPQVQTWRGARPMLPD
CCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCC
GLPVVGAAGAPGVWINAGHGACGWALACGSARAVADLVAQRVPETDLQPFGLRRF
CCCEEECCCCCCEEEECCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MHIAIVGAGIVGTATAYELACDGHAVTVFEQRGAAAEEASFANAGLLAPAPLIPWASPAV
CEEEEEECCHHHCCCEEEEEECCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCC
GGPARQRLLGRHAAVRLAQGAGLADLRWLWRRRRAARGGMAESSVAALARFGHYSHIRMR
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHH
QVAQALDLDPESSRGVLVLLRAPADLDRVQPAARILREAGLNVLDVDADTARLIEPGLAS
HHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHCCCCCC
DNELAGALHLPDGESGNCRLFAQMLRYAAQERGVQFLFQSRVEALQGGPAGVRLAGERDA
CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCH
RRFDAVVVCAGVSAAALLRGTGTAMPLAALHGYTLSAPVREDTHAPQGTVIDPLHRITVT
HHHCEEEEECCCHHHHHHHCCCCCCHHHHHCCCEEECCCCCCCCCCCCCEECCHHHEEEE
RQGQRVRVAGGAELGPGGGAPHAPTLQTLYNAASGWFPGGAQWSSPQVQTWRGARPMLPD
CCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCC
GLPVVGAAGAPGVWINAGHGACGWALACGSARAVADLVAQRVPETDLQPFGLRRF
CCCEEECCCCCCEEEECCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA