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The map label for this gene is atpC1 [H]

Identifier: 120610481

GI number: 120610481

Start: 1952492

End: 1952980

Strand: Direct

Name: atpC1 [H]

Synonym: Aave_1800

Alternate gene names: 120610481

Gene position: 1952492-1952980 (Clockwise)

Preceding gene: 120610477

Following gene: 120610482

Centisome position: 36.48

GC content: 74.64

Gene sequence:

>489_bases
ATGGCCACCACGCCAGCCCGCGGACCTGCCCCCATGCCTTCATCGCCATCGCCATCGCCCGCCGCAGCGCCGGACGGCGC
CCTGCAACTCGAAATCGCCCACATGGAAGGCCTGGTCTGGTCCGGCCCGGTGCGCGTGGTGGGCCTGCCGGGCGCGGAGG
GTGCCTTCGGCGTGCTGCACGGCCACACGCCGCTGCTCACGCGGCTGCGCGCGGGCTTCGTGCACATCGAGACCCCGGCC
GGCGAGCGCATCGAGGTGTATGTGTCCGGCGGCTACGTGGAGATCCAGCCCGCGCGGGTCACGGTGCTTGCCGACACCGC
CGTGCGCAATGCCGACCTCGACGCCGCGCGCGCCGAGGCCGCGAAGCAGGCGGCCTCCAGCCTGCTCGGCGGGGAGCTGG
CCCACATCGACCACGCCCTGCTGCACGCCGAGATCGCGCGCGCCGCGGCGCAGTGGGCGCACGAAGCGCGCAAGCTCTCG
GGGCGCTAG

Upstream 100 bases:

>100_bases
CCACTCCGAGGAGCAAAGTTCATAACACGCTCTAGACTGGTGGCCTGTCATTCACGTTGCGGTGGCCGTGCCGCCATCGG
GATTTACCCGGTGCGCGGCC

Downstream 100 bases:

>100_bases
GGAAGCCGCCCTCCGGCCGGGCCCGCCATCCTGCCCGGCGCAAAGCATCCGATAATCGAGGGCAAAGCCTCCGCCGCGCG
GCTCCCCGCCGCTGCCTCCC

Product: ATP synthase F1 subunit epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit 1; F-ATPase epsilon subunit 1 [H]

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MATTPARGPAPMPSSPSPSPAAAPDGALQLEIAHMEGLVWSGPVRVVGLPGAEGAFGVLHGHTPLLTRLRAGFVHIETPA
GERIEVYVSGGYVEIQPARVTVLADTAVRNADLDAARAEAAKQAASSLLGGELAHIDHALLHAEIARAAAQWAHEARKLS
GR

Sequences:

>Translated_162_residues
MATTPARGPAPMPSSPSPSPAAAPDGALQLEIAHMEGLVWSGPVRVVGLPGAEGAFGVLHGHTPLLTRLRAGFVHIETPA
GERIEVYVSGGYVEIQPARVTVLADTAVRNADLDAARAEAAKQAASSLLGGELAHIDHALLHAEIARAAAQWAHEARKLS
GR
>Mature_161_residues
ATTPARGPAPMPSSPSPSPAAAPDGALQLEIAHMEGLVWSGPVRVVGLPGAEGAFGVLHGHTPLLTRLRAGFVHIETPAG
ERIEVYVSGGYVEIQPARVTVLADTAVRNADLDAARAEAAKQAASSLLGGELAHIDHALLHAEIARAAAQWAHEARKLSG
R

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane [H]

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family [H]

Homologues:

Organism=Escherichia coli, GI1790169, Length=123, Percent_Identity=41.4634146341463, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001469
- InterPro:   IPR020547
- InterPro:   IPR020546
- ProDom:   PD000944 [H]

Pfam domain/function: PF00401 ATP-synt_DE; PF02823 ATP-synt_DE_N [H]

EC number: 3.6.3.14

Molecular weight: Translated: 16719; Mature: 16588

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTPARGPAPMPSSPSPSPAAAPDGALQLEIAHMEGLVWSGPVRVVGLPGAEGAFGVLH
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEECCCEEEEECCCCCCCEEEEE
GHTPLLTRLRAGFVHIETPAGERIEVYVSGGYVEIQPARVTVLADTAVRNADLDAARAEA
CCCHHHHHHHCCEEEEECCCCCEEEEEEECCEEEEECCEEEEEECCCCCCCCCCHHHHHH
AKQAASSLLGGELAHIDHALLHAEIARAAAQWAHEARKLSGR
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ATTPARGPAPMPSSPSPSPAAAPDGALQLEIAHMEGLVWSGPVRVVGLPGAEGAFGVLH
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEECCCEEEEECCCCCCCEEEEE
GHTPLLTRLRAGFVHIETPAGERIEVYVSGGYVEIQPARVTVLADTAVRNADLDAARAEA
CCCHHHHHHHCCEEEEECCCCCEEEEEEECCEEEEECCEEEEEECCCCCCCCCCHHHHHH
AKQAASSLLGGELAHIDHALLHAEIARAAAQWAHEARKLSGR
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA