| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610399
Identifier: 120610399
GI number: 120610399
Start: 1874365
End: 1876590
Strand: Direct
Name: 120610399
Synonym: Aave_1716
Alternate gene names: NA
Gene position: 1874365-1876590 (Clockwise)
Preceding gene: 120610398
Following gene: 120610401
Centisome position: 35.02
GC content: 71.7
Gene sequence:
>2226_bases ATGCGAGGCTTTCAACCGGCGGCGCACCGTGCCGCCAAGACCAGTGGATATGCCGGCGGCGGCGTGGTGCGCGGGCCTGG CACCGGCACCTCCGATGACGTGCAGGACGCCGTTGCGCCGGGCACCTACATCATGCCGGCCGACAGCACCCAACAGGTGG GGGCTCAGAACCTCGAGACCATGGGCGCGCGCGGCTTCCAGCCCGGTCGGAAGGTGGCCGTGAACCTGAGCAACGGCGAG TTCAAGCTGCCGCCGGAGCAGGTGCATGCCATCGGCGTGCAGGCGCTGGACCAGATGAAGGATGCGACCCACGCGCCGGT GCGCGGCTTTTCCCCGGGAGCACGGCCGCCGGCGCCGCCGGAGCCGCGCTTCTTCTTCGCCAACGGGGGGCTGGTCAGCG ACCCGCCGCAGAGCGCCGCCGCGACGGCAGCCCAGCCGGCTGCCCCAGCGCCTGCAGCCGCCGCAGCGGCGCCCGGGGCA CCGATGGGGTGGGCGGAGCGCAACGCCCAGCGCAGCCTGGAGGTGACGGCCAGCTCCATCATGCCCAGCGCCGACCGCGA TGCTGCGCAAAGCAAGCTGGCCAGCATGAGCCAGCCCGCCAACACGGCGCCCCCCGGCACCGCGCCAACCCCGCTGGGCA GCACCACGCCTGTGAGCGCCGCGCCGGCGGCCGTGGGCTTCCCCGCGCCTGCACTCCAGCGTCCGCCCGGCCTGCCGCCT GCGACCACGTACGCGACGCGTCCGAGCTTCGCCGATGGCGGCGTGGTCAAGGACGAAGAGCGGCGCAAGCAAATCTCCCC CTCCAACATCTACCCGCAGGGCAGCCCGAGCGCGGGCCGCAGCCCCTACGTCGGCGCCGCGCCGGAGGCCGAACCCCAGA CTCGGGGCTTCTCGCCGCGCCCGAGCGGGCAGTCCGACCAGCGTGCGGCCGGGCCGTCCGAGCTGTACATGCAGGACCGG GCGCAGGAGCTGAAAGACCAGGTGAGCTCCGGCAACTACGCCCAGGCCGCCGGCACTGCTGCGCGCACCGCGGTGCAGGG GCTGGGCATGTACGGGCTGGAGCTGGCGGACAAGGTTTCCGAGCCGATCATCGGCGCGGCACGAGGCTTCGGCTCGGGGC TGTTCGGGACGGTCGACGCCGCGCCCGCTCCCGCGGCTGCCCCCGCCGCTGCAGATGCTCCCGCAGCAGCGCCGACAGCA TCTCCTGCAGCACGCGGCTTCGCGCCGGGCATGGCGGAGGAGAGCCGCCGCAGCGTAATGCAGCAGGCTGGCGCTCAGCC GGCCACTGCGCAAGCCGCAACGGGCTCGGCCGCCGAGGTGCGCCCAGGCGTTTTCGAGCACGGCCGTGGGCAGTTCAGCG ACCAAGCGACGGGCATGAACTTCCCCCGCGGGTTCTCCGGCCGGCCCACCGCCGCGGCAGATGCTGCTGCAGAAAGCATG GTGCGCGGCTTCGCGCCCGGCATGCGACCCCAGCCGGAGGACTCACCGGTTCGGGGCTTCCAGCCTGGTGCATTCTCGGC GCCGGTAGCCCGTCACTCGGGCAACGACTGGCAGGCCCGCAACGACCTTCGCAACGCCCAGGTATCGGCCTCCAGCATCA TGAACAACGGCGGCCGGTGGGACCAGCACAAGGGCATGTCGCCAGAGGCAGCCACCGCGGCGGCCATGACCAATGCCGAT CTCGCGGCCCGCGCGGCACAGCCGGGCATGGACACCGAAGCCATGCGCCAGAACGCGGCACTGGCGCGCGAAGAAATGCA GCAGGCCGGTGAGACCCAACGTGCCGGCGCCCGAGCCGCTGTCGAAGCGCAGCGGACTGGCATTGCGGCGCAGCAGGCCG CCACGCAACGGCGGTCGGTGGACAGCCAGGTGGAGGCCCAGGGCTACGCCAACCGCATCGCGGCCCAGCAGGAGCAACTG CGCGGCGTGCTTGTCGATCCCACCGCATCAGAGGCCGCCAAGGCGCAGGCACAGCGGGCACTGCGGGCGCTGGCTGGCCA GGGCCAGAACGACTGGCGCGTACAGGTCACGCCCGCGGTCAAGAACGCCGATGGCTCTACCAGCGAGGGGAGTGTGCTCC GGTACAACCAAGCGACAGGGGACGTGCAGCGGGTGGATGTGGGGCAGGGATCTGCGCTGCCTGCGGGTATGAAGAAACTG GTCGGAACCTCTGGAGGAAAGCCCGTTTACGAAGACGCAAGTGGTAAGCGTTTCGTTGCTTCTTAA
Upstream 100 bases:
>100_bases CCCTGCTGAGCTCAGGCAGCCGGCTCAACGCCCGCGTATAGGGCTTTGCAGGCGTGCGGCTGGGCCGAAGAATCGGCACA TCTGCATCACAGGAGGCTCC
Downstream 100 bases:
>100_bases GGTCTAGCGTTCGTGGTCGAGCTTGCCGCTGAATGGCCTGAAGCCTTCAGGTGCATCGTCATACAGCTTCCGGCAAGCAA CACCAACGAAGACGGCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 741; Mature: 741
Protein sequence:
>741_residues MRGFQPAAHRAAKTSGYAGGGVVRGPGTGTSDDVQDAVAPGTYIMPADSTQQVGAQNLETMGARGFQPGRKVAVNLSNGE FKLPPEQVHAIGVQALDQMKDATHAPVRGFSPGARPPAPPEPRFFFANGGLVSDPPQSAAATAAQPAAPAPAAAAAAPGA PMGWAERNAQRSLEVTASSIMPSADRDAAQSKLASMSQPANTAPPGTAPTPLGSTTPVSAAPAAVGFPAPALQRPPGLPP ATTYATRPSFADGGVVKDEERRKQISPSNIYPQGSPSAGRSPYVGAAPEAEPQTRGFSPRPSGQSDQRAAGPSELYMQDR AQELKDQVSSGNYAQAAGTAARTAVQGLGMYGLELADKVSEPIIGAARGFGSGLFGTVDAAPAPAAAPAAADAPAAAPTA SPAARGFAPGMAEESRRSVMQQAGAQPATAQAATGSAAEVRPGVFEHGRGQFSDQATGMNFPRGFSGRPTAAADAAAESM VRGFAPGMRPQPEDSPVRGFQPGAFSAPVARHSGNDWQARNDLRNAQVSASSIMNNGGRWDQHKGMSPEAATAAAMTNAD LAARAAQPGMDTEAMRQNAALAREEMQQAGETQRAGARAAVEAQRTGIAAQQAATQRRSVDSQVEAQGYANRIAAQQEQL RGVLVDPTASEAAKAQAQRALRALAGQGQNDWRVQVTPAVKNADGSTSEGSVLRYNQATGDVQRVDVGQGSALPAGMKKL VGTSGGKPVYEDASGKRFVAS
Sequences:
>Translated_741_residues MRGFQPAAHRAAKTSGYAGGGVVRGPGTGTSDDVQDAVAPGTYIMPADSTQQVGAQNLETMGARGFQPGRKVAVNLSNGE FKLPPEQVHAIGVQALDQMKDATHAPVRGFSPGARPPAPPEPRFFFANGGLVSDPPQSAAATAAQPAAPAPAAAAAAPGA PMGWAERNAQRSLEVTASSIMPSADRDAAQSKLASMSQPANTAPPGTAPTPLGSTTPVSAAPAAVGFPAPALQRPPGLPP ATTYATRPSFADGGVVKDEERRKQISPSNIYPQGSPSAGRSPYVGAAPEAEPQTRGFSPRPSGQSDQRAAGPSELYMQDR AQELKDQVSSGNYAQAAGTAARTAVQGLGMYGLELADKVSEPIIGAARGFGSGLFGTVDAAPAPAAAPAAADAPAAAPTA SPAARGFAPGMAEESRRSVMQQAGAQPATAQAATGSAAEVRPGVFEHGRGQFSDQATGMNFPRGFSGRPTAAADAAAESM VRGFAPGMRPQPEDSPVRGFQPGAFSAPVARHSGNDWQARNDLRNAQVSASSIMNNGGRWDQHKGMSPEAATAAAMTNAD LAARAAQPGMDTEAMRQNAALAREEMQQAGETQRAGARAAVEAQRTGIAAQQAATQRRSVDSQVEAQGYANRIAAQQEQL RGVLVDPTASEAAKAQAQRALRALAGQGQNDWRVQVTPAVKNADGSTSEGSVLRYNQATGDVQRVDVGQGSALPAGMKKL VGTSGGKPVYEDASGKRFVAS >Mature_741_residues MRGFQPAAHRAAKTSGYAGGGVVRGPGTGTSDDVQDAVAPGTYIMPADSTQQVGAQNLETMGARGFQPGRKVAVNLSNGE FKLPPEQVHAIGVQALDQMKDATHAPVRGFSPGARPPAPPEPRFFFANGGLVSDPPQSAAATAAQPAAPAPAAAAAAPGA PMGWAERNAQRSLEVTASSIMPSADRDAAQSKLASMSQPANTAPPGTAPTPLGSTTPVSAAPAAVGFPAPALQRPPGLPP ATTYATRPSFADGGVVKDEERRKQISPSNIYPQGSPSAGRSPYVGAAPEAEPQTRGFSPRPSGQSDQRAAGPSELYMQDR AQELKDQVSSGNYAQAAGTAARTAVQGLGMYGLELADKVSEPIIGAARGFGSGLFGTVDAAPAPAAAPAAADAPAAAPTA SPAARGFAPGMAEESRRSVMQQAGAQPATAQAATGSAAEVRPGVFEHGRGQFSDQATGMNFPRGFSGRPTAAADAAAESM VRGFAPGMRPQPEDSPVRGFQPGAFSAPVARHSGNDWQARNDLRNAQVSASSIMNNGGRWDQHKGMSPEAATAAAMTNAD LAARAAQPGMDTEAMRQNAALAREEMQQAGETQRAGARAAVEAQRTGIAAQQAATQRRSVDSQVEAQGYANRIAAQQEQL RGVLVDPTASEAAKAQAQRALRALAGQGQNDWRVQVTPAVKNADGSTSEGSVLRYNQATGDVQRVDVGQGSALPAGMKKL VGTSGGKPVYEDASGKRFVAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75519; Mature: 75519
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGFQPAAHRAAKTSGYAGGGVVRGPGTGTSDDVQDAVAPGTYIMPADSTQQVGAQNLET CCCCCHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHCCCCEEECCCCHHHHHHHHHHH MGARGFQPGRKVAVNLSNGEFKLPPEQVHAIGVQALDQMKDATHAPVRGFSPGARPPAPP HCCCCCCCCCEEEEEECCCCEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC EPRFFFANGGLVSDPPQSAAATAAQPAAPAPAAAAAAPGAPMGWAERNAQRSLEVTASSI CCCEEEECCCCCCCCCHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHH MPSADRDAAQSKLASMSQPANTAPPGTAPTPLGSTTPVSAAPAAVGFPAPALQRPPGLPP CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC ATTYATRPSFADGGVVKDEERRKQISPSNIYPQGSPSAGRSPYVGAAPEAEPQTRGFSPR CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PSGQSDQRAAGPSELYMQDRAQELKDQVSSGNYAQAAGTAARTAVQGLGMYGLELADKVS CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH EPIIGAARGFGSGLFGTVDAAPAPAAAPAAADAPAAAPTASPAARGFAPGMAEESRRSVM CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHH QQAGAQPATAQAATGSAAEVRPGVFEHGRGQFSDQATGMNFPRGFSGRPTAAADAAAESM HHHCCCCCCHHHCCCCHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH VRGFAPGMRPQPEDSPVRGFQPGAFSAPVARHSGNDWQARNDLRNAQVSASSIMNNGGRW HHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCC DQHKGMSPEAATAAAMTNADLAARAAQPGMDTEAMRQNAALAREEMQQAGETQRAGARAA HHCCCCCCHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHCCHHH VEAQRTGIAAQQAATQRRSVDSQVEAQGYANRIAAQQEQLRGVLVDPTASEAAKAQAQRA HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHH LRALAGQGQNDWRVQVTPAVKNADGSTSEGSVLRYNQATGDVQRVDVGQGSALPAGMKKL HHHHHCCCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCHHHHHHH VGTSGGKPVYEDASGKRFVAS HCCCCCCCCCCCCCCCEECCC >Mature Secondary Structure MRGFQPAAHRAAKTSGYAGGGVVRGPGTGTSDDVQDAVAPGTYIMPADSTQQVGAQNLET CCCCCHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHCCCCEEECCCCHHHHHHHHHHH MGARGFQPGRKVAVNLSNGEFKLPPEQVHAIGVQALDQMKDATHAPVRGFSPGARPPAPP HCCCCCCCCCEEEEEECCCCEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC EPRFFFANGGLVSDPPQSAAATAAQPAAPAPAAAAAAPGAPMGWAERNAQRSLEVTASSI CCCEEEECCCCCCCCCHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHH MPSADRDAAQSKLASMSQPANTAPPGTAPTPLGSTTPVSAAPAAVGFPAPALQRPPGLPP CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC ATTYATRPSFADGGVVKDEERRKQISPSNIYPQGSPSAGRSPYVGAAPEAEPQTRGFSPR CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PSGQSDQRAAGPSELYMQDRAQELKDQVSSGNYAQAAGTAARTAVQGLGMYGLELADKVS CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH EPIIGAARGFGSGLFGTVDAAPAPAAAPAAADAPAAAPTASPAARGFAPGMAEESRRSVM CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHH QQAGAQPATAQAATGSAAEVRPGVFEHGRGQFSDQATGMNFPRGFSGRPTAAADAAAESM HHHCCCCCCHHHCCCCHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH VRGFAPGMRPQPEDSPVRGFQPGAFSAPVARHSGNDWQARNDLRNAQVSASSIMNNGGRW HHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCC DQHKGMSPEAATAAAMTNADLAARAAQPGMDTEAMRQNAALAREEMQQAGETQRAGARAA HHCCCCCCHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHCCHHH VEAQRTGIAAQQAATQRRSVDSQVEAQGYANRIAAQQEQLRGVLVDPTASEAAKAQAQRA HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHH LRALAGQGQNDWRVQVTPAVKNADGSTSEGSVLRYNQATGDVQRVDVGQGSALPAGMKKL HHHHHCCCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCHHHHHHH VGTSGGKPVYEDASGKRFVAS HCCCCCCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA