| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610385
Identifier: 120610385
GI number: 120610385
Start: 1858787
End: 1859860
Strand: Direct
Name: 120610385
Synonym: Aave_1702
Alternate gene names: NA
Gene position: 1858787-1859860 (Clockwise)
Preceding gene: 120610383
Following gene: 120610386
Centisome position: 34.73
GC content: 67.6
Gene sequence:
>1074_bases ATGACGACATCACACGAGAGTTTCTACAGCGGCATCGACAGCGCATTGACGCCGGAGCAGGCCCTTCAGGCACTGGCCTT GGAAGGCACGGGCGATACCAGCACCGCAACGGTGCCGGATGCAGGTGGCGCGCCCACGACCACCACTGCGACGGACGACA AAGGCGCGGCCAAGGCCGACACCGACAACGAACAGGAGCAGCCCGCCCAGGGCAAGGCCGACGACGGCAAGACCGTGGAT GTCAGCGCAACGGAGGTGGATGAGTCGCAGATCGACCCGTCGAAGGCCGTGGTGCTGGCGAAGGATGGCAAACACACCAT CCCCTACGCGAAGCTGGAGGAGGCCCGCAAGGGCGCTCAGCAATGGCAGGCCGCCGCAGAAGCCGCTCAGCAACAACTGG CCGATCTGCAGGCGCAGGCGCAGGCCCGGGCAGACGCCGGACAGGCCCCGACCAAGACCGACAACATGGCAGCCACCGCA GCGGCGGCCATCGAAGCGGGTGCGGACGCGGACCTGTTCGGCGACTTCTCCGAGGAGGCGCTGAAAGCCGGCATCGAAAA GCTGGTGGCCCAGCAGGTAGCGACCCAGGTGCAGGCGCATGTGGCCAAAGCCGTGGAGCCGCTGCAGGCCAAGCACCAGC AGGACGCGGCCAGCTCGCACTTCGACGCCATCTACAAGGCGCACCCCAACGCGGACTCCATCGTGCAGAGCTCGGAGTTC CAGGCGTGGGTGGACTCGCACCCCAGCGTGGTCCGCGACGCGTACCGGGGACTGTTCGACGCGAAAACGGGCGGCAGCGC GGCCCAGATCGTGGAGGTGTTCGACGCATACAAGGCGGCGACCGCGAAACCCTCGTCTCAACCAGCTGCGGCCGACCCCA AGGCCGCAGCGCAAGCCGCCCTGGCGAAAGCCAAGGCCGATCCCCCGTCCAGCCTTTCCAGCATCCCTGGCGGGCACGCG GCGGGAGCGTCGGCCTTGGATGCCACGGCGGACATGAGCGGCCTCGAGATGCTGCAGGCGACGGCCAACATGTCGCCCGC GCAGATCGAGGCCTGGCTGAACAAGCAGATCTAA
Upstream 100 bases:
>100_bases GCGTGCGAGCGCACCGGATCCACGAGCAGATGGCGCGGCCTCCATGGCCGCTCCGGATTGCTGGCCCCTTGCGGCCACGG CGACATGTGGCGGGACAGGC
Downstream 100 bases:
>100_bases GGAGGTTCATGTGAACACCAAGACCAACACCCCGGCCGGCGCTCCGGGCGCGATGATCCAGCAGGCTGTGGGCGTTTTCC ACACCTGCACCCAGCGCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MTTSHESFYSGIDSALTPEQALQALALEGTGDTSTATVPDAGGAPTTTTATDDKGAAKADTDNEQEQPAQGKADDGKTVD VSATEVDESQIDPSKAVVLAKDGKHTIPYAKLEEARKGAQQWQAAAEAAQQQLADLQAQAQARADAGQAPTKTDNMAATA AAAIEAGADADLFGDFSEEALKAGIEKLVAQQVATQVQAHVAKAVEPLQAKHQQDAASSHFDAIYKAHPNADSIVQSSEF QAWVDSHPSVVRDAYRGLFDAKTGGSAAQIVEVFDAYKAATAKPSSQPAAADPKAAAQAALAKAKADPPSSLSSIPGGHA AGASALDATADMSGLEMLQATANMSPAQIEAWLNKQI
Sequences:
>Translated_357_residues MTTSHESFYSGIDSALTPEQALQALALEGTGDTSTATVPDAGGAPTTTTATDDKGAAKADTDNEQEQPAQGKADDGKTVD VSATEVDESQIDPSKAVVLAKDGKHTIPYAKLEEARKGAQQWQAAAEAAQQQLADLQAQAQARADAGQAPTKTDNMAATA AAAIEAGADADLFGDFSEEALKAGIEKLVAQQVATQVQAHVAKAVEPLQAKHQQDAASSHFDAIYKAHPNADSIVQSSEF QAWVDSHPSVVRDAYRGLFDAKTGGSAAQIVEVFDAYKAATAKPSSQPAAADPKAAAQAALAKAKADPPSSLSSIPGGHA AGASALDATADMSGLEMLQATANMSPAQIEAWLNKQI >Mature_356_residues TTSHESFYSGIDSALTPEQALQALALEGTGDTSTATVPDAGGAPTTTTATDDKGAAKADTDNEQEQPAQGKADDGKTVDV SATEVDESQIDPSKAVVLAKDGKHTIPYAKLEEARKGAQQWQAAAEAAQQQLADLQAQAQARADAGQAPTKTDNMAATAA AAIEAGADADLFGDFSEEALKAGIEKLVAQQVATQVQAHVAKAVEPLQAKHQQDAASSHFDAIYKAHPNADSIVQSSEFQ AWVDSHPSVVRDAYRGLFDAKTGGSAAQIVEVFDAYKAATAKPSSQPAAADPKAAAQAALAKAKADPPSSLSSIPGGHAA GASALDATADMSGLEMLQATANMSPAQIEAWLNKQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36588; Mature: 36457
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSHESFYSGIDSALTPEQALQALALEGTGDTSTATVPDAGGAPTTTTATDDKGAAKAD CCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TDNEQEQPAQGKADDGKTVDVSATEVDESQIDPSKAVVLAKDGKHTIPYAKLEEARKGAQ CCCCCCCCCCCCCCCCCEEEEEHHHCCHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHH QWQAAAEAAQQQLADLQAQAQARADAGQAPTKTDNMAATAAAAIEAGADADLFGDFSEEA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCHHHHH LKAGIEKLVAQQVATQVQAHVAKAVEPLQAKHQQDAASSHFDAIYKAHPNADSIVQSSEF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH QAWVDSHPSVVRDAYRGLFDAKTGGSAAQIVEVFDAYKAATAKPSSQPAAADPKAAAQAA HHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH LAKAKADPPSSLSSIPGGHAAGASALDATADMSGLEMLQATANMSPAQIEAWLNKQI HHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC >Mature Secondary Structure TTSHESFYSGIDSALTPEQALQALALEGTGDTSTATVPDAGGAPTTTTATDDKGAAKAD CCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TDNEQEQPAQGKADDGKTVDVSATEVDESQIDPSKAVVLAKDGKHTIPYAKLEEARKGAQ CCCCCCCCCCCCCCCCCEEEEEHHHCCHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHH QWQAAAEAAQQQLADLQAQAQARADAGQAPTKTDNMAATAAAAIEAGADADLFGDFSEEA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCHHHHH LKAGIEKLVAQQVATQVQAHVAKAVEPLQAKHQQDAASSHFDAIYKAHPNADSIVQSSEF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH QAWVDSHPSVVRDAYRGLFDAKTGGSAAQIVEVFDAYKAATAKPSSQPAAADPKAAAQAA HHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH LAKAKADPPSSLSSIPGGHAAGASALDATADMSGLEMLQATANMSPAQIEAWLNKQI HHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA