Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120610371

Identifier: 120610371

GI number: 120610371

Start: 1846871

End: 1847266

Strand: Direct

Name: 120610371

Synonym: Aave_1688

Alternate gene names: NA

Gene position: 1846871-1847266 (Clockwise)

Preceding gene: 120610370

Following gene: 120610372

Centisome position: 34.5

GC content: 64.65

Gene sequence:

>396_bases
ATGGCTAAGCCCGTGCCACACGTCTCGTGGTTCCTGATGCGGGGGCGCATGCAGCGCGCGCGTGCTCCTACTCGTGCAGC
GCGAAGCCAGCGCGAGTCGTTGCAACTGGTTGAACGCACCGGCGCAGTCCTGGCGGCTATGCAGGACGCTGTGTGTCCGC
CGGCCGCCCCAGTTGAAACGCTGCGTCCCGCGGTTCCCGGACCCGTCTCCATCACCTTCAGCGAGTTTTCAACTGGAACT
GTGCATATCGAAGCCGGCGACAGGGTTCTCGCGCTCTGCTCGGAAGAGTTCCGACAGCTCAAAGCGCTGATGGCCCTGAA
GCCGGTAAAGCATGAAAAGGCCGTGACGGAGACGGCCCCCAGCCCACCCCTACAACCACCACCGGCCGCCGCATGA

Upstream 100 bases:

>100_bases
CACCGCGCCAGTATGCGCAAGGCGCCCCTCCCAAAGGAGCAGGTCCGTGCCGAGCCAGCCGGCCAGGGTGCCCCGATCGC
CTCCCAGACGGAGGTGAGCC

Downstream 100 bases:

>100_bases
GCACGACCCCAGAAGACCACGACGACCCCATGTTCGCCCGAGGCATTGCCGGGCCCCTCGGCAAGCTGACCTGCGACGCC
AAGACCAAGATCGATGAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MAKPVPHVSWFLMRGRMQRARAPTRAARSQRESLQLVERTGAVLAAMQDAVCPPAAPVETLRPAVPGPVSITFSEFSTGT
VHIEAGDRVLALCSEEFRQLKALMALKPVKHEKAVTETAPSPPLQPPPAAA

Sequences:

>Translated_131_residues
MAKPVPHVSWFLMRGRMQRARAPTRAARSQRESLQLVERTGAVLAAMQDAVCPPAAPVETLRPAVPGPVSITFSEFSTGT
VHIEAGDRVLALCSEEFRQLKALMALKPVKHEKAVTETAPSPPLQPPPAAA
>Mature_130_residues
AKPVPHVSWFLMRGRMQRARAPTRAARSQRESLQLVERTGAVLAAMQDAVCPPAAPVETLRPAVPGPVSITFSEFSTGTV
HIEAGDRVLALCSEEFRQLKALMALKPVKHEKAVTETAPSPPLQPPPAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14085; Mature: 13953

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKPVPHVSWFLMRGRMQRARAPTRAARSQRESLQLVERTGAVLAAMQDAVCPPAAPVET
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
LRPAVPGPVSITFSEFSTGTVHIEAGDRVLALCSEEFRQLKALMALKPVKHEKAVTETAP
HCCCCCCCEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
SPPLQPPPAAA
CCCCCCCCCCC
>Mature Secondary Structure 
AKPVPHVSWFLMRGRMQRARAPTRAARSQRESLQLVERTGAVLAAMQDAVCPPAAPVET
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
LRPAVPGPVSITFSEFSTGTVHIEAGDRVLALCSEEFRQLKALMALKPVKHEKAVTETAP
HCCCCCCCEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
SPPLQPPPAAA
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA