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The map label for this gene is yciH [H]

Identifier: 120610253

GI number: 120610253

Start: 1733936

End: 1734301

Strand: Direct

Name: yciH [H]

Synonym: Aave_1568

Alternate gene names: 120610253

Gene position: 1733936-1734301 (Clockwise)

Preceding gene: 120610251

Following gene: 120610254

Centisome position: 32.39

GC content: 75.41

Gene sequence:

>366_bases
ATGCGCCTGAGCGACCTGGGCGGCCTCGTCTATTCGACCGAATCCGGCCGCATGTGCCCCGCGTGCCGCCAGCCGGTCGC
GCAATGCGCCTGCGCCGCCGCGCGCGCGGCAGCGGTGCCGGCGGGCGACGGCATCGTGCGCGTCTCCCGCGAGACCAAGG
GCCGGGGCGGCAAGGCGGTGACCGTGGTGAAGGGCGTGGCGCTGCCCGCGGCCGAGCTGGCCCAGCTGGGCAAGCAGCTC
AAGGCCGCCTGCGGCACGGGCGGCACCGCCAAGGACGGCGTGATCGAAGTGCAGGGCGACCATGTGGAGCGCGTCATGCA
GGCGCTCCAGGCGCTGGGCCACAAGGTCAGGCGCGCGGGCGGGTGA

Upstream 100 bases:

>100_bases
ATTGTGCGGCACCGCCGCATGCCCCGGATAATCGCGCCATGCCCAGTCCTGCCGCCACCTCCGCGTCCGCCCCCGCCGCC
GGCCTCCACCGGAGCCTTCC

Downstream 100 bases:

>100_bases
GGGGGAGTACGGCCATGGACCCGGCACAGCTCGAGCGGCTCGTCACGGTGGTCATGCCCTACGGCAAGCACAAGGGCACG
GCGATCGCCGACCTGCCCGG

Product: translation initiation factor Sui1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MRLSDLGGLVYSTESGRMCPACRQPVAQCACAAARAAAVPAGDGIVRVSRETKGRGGKAVTVVKGVALPAAELAQLGKQL
KAACGTGGTAKDGVIEVQGDHVERVMQALQALGHKVRRAGG

Sequences:

>Translated_121_residues
MRLSDLGGLVYSTESGRMCPACRQPVAQCACAAARAAAVPAGDGIVRVSRETKGRGGKAVTVVKGVALPAAELAQLGKQL
KAACGTGGTAKDGVIEVQGDHVERVMQALQALGHKVRRAGG
>Mature_121_residues
MRLSDLGGLVYSTESGRMCPACRQPVAQCACAAARAAAVPAGDGIVRVSRETKGRGGKAVTVVKGVALPAAELAQLGKQL
KAACGTGGTAKDGVIEVQGDHVERVMQALQALGHKVRRAGG

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family [H]

Homologues:

Organism=Escherichia coli, GI87081867, Length=113, Percent_Identity=46.9026548672566, Blast_Score=93, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005872
- InterPro:   IPR001950 [H]

Pfam domain/function: PF01253 SUI1 [H]

EC number: NA

Molecular weight: Translated: 12221; Mature: 12221

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSDLGGLVYSTESGRMCPACRQPVAQCACAAARAAAVPAGDGIVRVSRETKGRGGKAV
CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEE
TVVKGVALPAAELAQLGKQLKAACGTGGTAKDGVIEVQGDHVERVMQALQALGHKVRRAG
EEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCC
G
C
>Mature Secondary Structure
MRLSDLGGLVYSTESGRMCPACRQPVAQCACAAARAAAVPAGDGIVRVSRETKGRGGKAV
CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEE
TVVKGVALPAAELAQLGKQLKAACGTGGTAKDGVIEVQGDHVERVMQALQALGHKVRRAG
EEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2956254; 9097039; 9278503; 10497266 [H]