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The map label for this gene is cobD [H]

Identifier: 120610230

GI number: 120610230

Start: 1710700

End: 1711728

Strand: Direct

Name: cobD [H]

Synonym: Aave_1545

Alternate gene names: 120610230

Gene position: 1710700-1711728 (Clockwise)

Preceding gene: 120610229

Following gene: 120610231

Centisome position: 31.96

GC content: 76.58

Gene sequence:

>1029_bases
ATGGCTGACGGAGGCTCCGCGCTGCTGCAGGCCCTGCTGGCCGCGCTGCCCTGGGCCGCCGCCCTCGCGGCCGCGCTGGC
GATCGACCGGTGGTGGGGCGAGCCGCCGGTGGCCCTGCATCCGGTGGTCTGGATGGGGCGCGCGCTGCACTGGTGCGGCG
AACGCACCGCGCCCGCGCAGCCGGTGGCCGCGGATGCCCGGGCGTTCGTGCTGGGCGCGGCGGCCTGGCTGCTGATGGCC
TCGGTGGTGGCCGGTGCCGCCGGGGCGCTGCAGCACGCGGCACGGCAGCTGCCCGCATGGTGGGCCGTGCCCGTGCTGGC
CCTGCTGCTCAAGCCCCTGCTGGCCTGGCGCATGCTGCGCGACGAGGTCGTGGCCGTGGAGGAGGCCCTGGCGCAATCGC
TGGAGGCCGGCCGCGAGCGGCTGTCGCGCCTGGTGAGCCGCGACGTCCACGCGCTGCAGGCCGTGCAGGTGCGTGAATCC
GCCATCGAGTCGCTGGCGGAGAACCTGAACGATTCCGTGGTGGCGCCGCTGTTCTGGTTCGCGCTGCTGGGGCTGCCCGG
CGCGGCGCTCTACCGCTTCGCCAACACCGCGGATGCCATGTGGGGCTACCCCGGCATGCGCGGCGGGCGCTACTGGCAGT
GGGCCGGCAAGTGGGCGGCGCGCGCGGACGACGTGCTCTCGTGGGTTCCCGCGCGCATCACGGCGGTGCTGCTGGCGCTG
TCCGCGCGCCGCGGGCGCTGGGCCGCGGTGGCCCGGCAGGCGCGCCGGACACCGTCGCCCAACAGCGGCTGGCCGATGGC
CGCGATGGCGCTCGCGCTGGACGTGCGGCTGTGCAAGCCCGGCGTGTACACCCTGCACCGCCGCGGCAGGGCCGCGGCCC
CGGCGGACACCCACCGGGCCGCCGTGCTGGCCGCGCGGGTCGTGGCATGGTGCCTGCCGCTCGCCCTGGCGGCGATATGG
GCGCTGGAGTGGCTGCGTGTCGTCCTGCATGGTGCCCTGCATGCCGCCCTGGGAGGCGTGCTGCCATGA

Upstream 100 bases:

>100_bases
CGCTGGGCGCGCCGCGCGCCGCTGGCCTCGGTGGTGTTCGACGGGGGCTGGGGACGCCCGGCGCGCTGGCTGTCCGGCAG
CGAAAACGGCGGGGCCGGGG

Downstream 100 bases:

>100_bases
CGCCAGAGGCGCTCGACGGTGGCGCAGCCGCGCAGGGGTTGCCGGTGCACGGCGGCCCGGATGCGCTGGGCGTTCCGCTG
CACGATTTTTCCACCAACGC

Product: adenosylcobinamide-phosphate synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MADGGSALLQALLAALPWAAALAAALAIDRWWGEPPVALHPVVWMGRALHWCGERTAPAQPVAADARAFVLGAAAWLLMA
SVVAGAAGALQHAARQLPAWWAVPVLALLLKPLLAWRMLRDEVVAVEEALAQSLEAGRERLSRLVSRDVHALQAVQVRES
AIESLAENLNDSVVAPLFWFALLGLPGAALYRFANTADAMWGYPGMRGGRYWQWAGKWAARADDVLSWVPARITAVLLAL
SARRGRWAAVARQARRTPSPNSGWPMAAMALALDVRLCKPGVYTLHRRGRAAAPADTHRAAVLAARVVAWCLPLALAAIW
ALEWLRVVLHGALHAALGGVLP

Sequences:

>Translated_342_residues
MADGGSALLQALLAALPWAAALAAALAIDRWWGEPPVALHPVVWMGRALHWCGERTAPAQPVAADARAFVLGAAAWLLMA
SVVAGAAGALQHAARQLPAWWAVPVLALLLKPLLAWRMLRDEVVAVEEALAQSLEAGRERLSRLVSRDVHALQAVQVRES
AIESLAENLNDSVVAPLFWFALLGLPGAALYRFANTADAMWGYPGMRGGRYWQWAGKWAARADDVLSWVPARITAVLLAL
SARRGRWAAVARQARRTPSPNSGWPMAAMALALDVRLCKPGVYTLHRRGRAAAPADTHRAAVLAARVVAWCLPLALAAIW
ALEWLRVVLHGALHAALGGVLP
>Mature_341_residues
ADGGSALLQALLAALPWAAALAAALAIDRWWGEPPVALHPVVWMGRALHWCGERTAPAQPVAADARAFVLGAAAWLLMAS
VVAGAAGALQHAARQLPAWWAVPVLALLLKPLLAWRMLRDEVVAVEEALAQSLEAGRERLSRLVSRDVHALQAVQVRESA
IESLAENLNDSVVAPLFWFALLGLPGAALYRFANTADAMWGYPGMRGGRYWQWAGKWAARADDVLSWVPARITAVLLALS
ARRGRWAAVARQARRTPSPNSGWPMAAMALALDVRLCKPGVYTLHRRGRAAAPADTHRAAVLAARVVAWCLPLALAAIWA
LEWLRVVLHGALHAALGGVLP

Specific function: Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group [H]

COG id: COG1270

COG function: function code H; Cobalamin biosynthesis protein CobD/CbiB

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CobD/CbiB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004485 [H]

Pfam domain/function: PF03186 CobD_Cbib [H]

EC number: NA

Molecular weight: Translated: 36667; Mature: 36536

Theoretical pI: Translated: 11.15; Mature: 11.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADGGSALLQALLAALPWAAALAAALAIDRWWGEPPVALHPVVWMGRALHWCGERTAPAQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
PVAADARAFVLGAAAWLLMASVVAGAAGALQHAARQLPAWWAVPVLALLLKPLLAWRMLR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
DEVVAVEEALAQSLEAGRERLSRLVSRDVHALQAVQVRESAIESLAENLNDSVVAPLFWF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ALLGLPGAALYRFANTADAMWGYPGMRGGRYWQWAGKWAARADDVLSWVPARITAVLLAL
HHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SARRGRWAAVARQARRTPSPNSGWPMAAMALALDVRLCKPGVYTLHRRGRAAAPADTHRA
HHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHH
AVLAARVVAWCLPLALAAIWALEWLRVVLHGALHAALGGVLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ADGGSALLQALLAALPWAAALAAALAIDRWWGEPPVALHPVVWMGRALHWCGERTAPAQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
PVAADARAFVLGAAAWLLMASVVAGAAGALQHAARQLPAWWAVPVLALLLKPLLAWRMLR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
DEVVAVEEALAQSLEAGRERLSRLVSRDVHALQAVQVRESAIESLAENLNDSVVAPLFWF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ALLGLPGAALYRFANTADAMWGYPGMRGGRYWQWAGKWAARADDVLSWVPARITAVLLAL
HHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SARRGRWAAVARQARRTPSPNSGWPMAAMALALDVRLCKPGVYTLHRRGRAAAPADTHRA
HHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHH
AVLAARVVAWCLPLALAAIWALEWLRVVLHGALHAALGGVLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]