| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120610205
Identifier: 120610205
GI number: 120610205
Start: 1685377
End: 1686153
Strand: Direct
Name: 120610205
Synonym: Aave_1520
Alternate gene names: NA
Gene position: 1685377-1686153 (Clockwise)
Preceding gene: 120610200
Following gene: 120610206
Centisome position: 31.49
GC content: 70.14
Gene sequence:
>777_bases GTGTTCCGTGACCTGAATGCCCTCCGCAGCCCTTCCCCGGAACGGCGGACTGCAGTCTCCGGGGAAGGTGCATCATCGAC TGGTTCCCCGCGCGCGGGCACGCCCATGCCCGGCAACCCCCATCTGGCCGGGCTGGCGCCACGCGCCGCCAGGCGGGCAT CCGCAGCGGATCCGGCACCACCGGCCGGCCCCGGGCTTGCGGGGCTCCATACCCTGCAGCCGGGACCGGCCGAGCTGTCG CCGGCGGAGCTGGGGGAAAAGATCGGCAGTGGCAGCCAGAAGGATGTCTACAGGCTGCGGAGCCGGCCCGGTGCCTGCGT CGCGCTCGTGCGCCGGGAGGCGATCGGGCATTTCGATACACCGCTGTCCCACGCGCAACGGGAGGTGGCGGCACTGCTGG AACTGAAGGCCCGCGGGTTCCGGACCGTGGCGGTGTATTCGCTGGTGCGGGTGGGGCGCCTGGTCGGCATCGAGCAGGCC TATCTGCCGGCGGCGAAGAACTCCGCGGACATCGTGGCCTCCGGCGGAGCCGTGCCCTCGGAGAGGTATCTCACCACCCT GACCGTGGACGATTGCGACACCAACATCGCCACACTCCGGCACACCCGGACCGTGGTGGACGATCTGCAGTTCCTGGTCG AGGAATCCGGGGCCCTGCACATCACCGACCCGCCCGCAGTGTGTACCGGTGATCCCGACAAAAGCGTGGGGACCGTGAAG GAGCTCAGGGGCCTGGCCCTGTCCGCCACCCTTTCCTCGGACGACGACAGCGCCTGA
Upstream 100 bases:
>100_bases GCAGCCAGGGCGCTTCGCCTGGCGCAATGCGGGTTCGCCTGCAGGGCGGCGTGGCGATGAAAGTCCTCCGAGCATCGGCG TTTTTCCAGGAATTCCTTCC
Downstream 100 bases:
>100_bases GCCACCCCGTCCTTCGCGTCTTGATCCAGGTCAATGTGCCCTGGGGGGTGGGCGCATAGCCTCGGGGCCATGCTTTCCGA TCCCTCCGAGTCGCCTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MFRDLNALRSPSPERRTAVSGEGASSTGSPRAGTPMPGNPHLAGLAPRAARRASAADPAPPAGPGLAGLHTLQPGPAELS PAELGEKIGSGSQKDVYRLRSRPGACVALVRREAIGHFDTPLSHAQREVAALLELKARGFRTVAVYSLVRVGRLVGIEQA YLPAAKNSADIVASGGAVPSERYLTTLTVDDCDTNIATLRHTRTVVDDLQFLVEESGALHITDPPAVCTGDPDKSVGTVK ELRGLALSATLSSDDDSA
Sequences:
>Translated_258_residues MFRDLNALRSPSPERRTAVSGEGASSTGSPRAGTPMPGNPHLAGLAPRAARRASAADPAPPAGPGLAGLHTLQPGPAELS PAELGEKIGSGSQKDVYRLRSRPGACVALVRREAIGHFDTPLSHAQREVAALLELKARGFRTVAVYSLVRVGRLVGIEQA YLPAAKNSADIVASGGAVPSERYLTTLTVDDCDTNIATLRHTRTVVDDLQFLVEESGALHITDPPAVCTGDPDKSVGTVK ELRGLALSATLSSDDDSA >Mature_258_residues MFRDLNALRSPSPERRTAVSGEGASSTGSPRAGTPMPGNPHLAGLAPRAARRASAADPAPPAGPGLAGLHTLQPGPAELS PAELGEKIGSGSQKDVYRLRSRPGACVALVRREAIGHFDTPLSHAQREVAALLELKARGFRTVAVYSLVRVGRLVGIEQA YLPAAKNSADIVASGGAVPSERYLTTLTVDDCDTNIATLRHTRTVVDDLQFLVEESGALHITDPPAVCTGDPDKSVGTVK ELRGLALSATLSSDDDSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26809; Mature: 26809
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRDLNALRSPSPERRTAVSGEGASSTGSPRAGTPMPGNPHLAGLAPRAARRASAADPAP CCCCCHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC PAGPGLAGLHTLQPGPAELSPAELGEKIGSGSQKDVYRLRSRPGACVALVRREAIGHFDT CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCC PLSHAQREVAALLELKARGFRTVAVYSLVRVGRLVGIEQAYLPAAKNSADIVASGGAVPS CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCC ERYLTTLTVDDCDTNIATLRHTRTVVDDLQFLVEESGALHITDPPAVCTGDPDKSVGTVK CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEECCCCCCCHHHHH ELRGLALSATLSSDDDSA HHHCCEEEEEECCCCCCC >Mature Secondary Structure MFRDLNALRSPSPERRTAVSGEGASSTGSPRAGTPMPGNPHLAGLAPRAARRASAADPAP CCCCCHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC PAGPGLAGLHTLQPGPAELSPAELGEKIGSGSQKDVYRLRSRPGACVALVRREAIGHFDT CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCC PLSHAQREVAALLELKARGFRTVAVYSLVRVGRLVGIEQAYLPAAKNSADIVASGGAVPS CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCC ERYLTTLTVDDCDTNIATLRHTRTVVDDLQFLVEESGALHITDPPAVCTGDPDKSVGTVK CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEECCCCCCCHHHHH ELRGLALSATLSSDDDSA HHHCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA