| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610196
Identifier: 120610196
GI number: 120610196
Start: 1674866
End: 1676359
Strand: Direct
Name: 120610196
Synonym: Aave_1511
Alternate gene names: NA
Gene position: 1674866-1676359 (Clockwise)
Preceding gene: 120610195
Following gene: 120610198
Centisome position: 31.29
GC content: 70.88
Gene sequence:
>1494_bases ATGAATGCCGCTTCCGAATGGATCACGCGCAGTGTCGCCCGCCTGCGCACCGAAGCCCCGCTCGCCGACCTCGATGCCGC GGGCGCGGCAGGCGGTGGCCGCCCGCCCGCCGCTGCCGCCCCGGCCGCCGCGCCGGCCAAGGCTCCGCCGCCGCGCTCCA CGTCCGAGCGCCTGGCCGCCACGCTGCGGCGGGGGCAGGAGGCTCTGTCCCCGCGCGCGCTGCGCCGGCTGCTGGCCGAT CTGCAGGCGGTCGCGGCGCCGCAGGCCAGCGAGGTGGAGGGGGGCCGGCAGGCCGAGGCCGTGGCGGCCTGGTACGCGGA GGCCAAGCCCGAAGAGCGCCGCGACATGTGGCTGCTGATGTGCGAGCAGTTCGCGCCCGACGCCACGCGCTTCAAGACGG CGCAGAAGCGCTACGAGGCCGCCGCCGGCACGGAGGACGAGGCGCACGCGGAAGTGCACCTGCGCCGGGCCCTGGTCTCG CCGCGCACGCGGCTGCTGCAGCGCTTCGCGGTGTTTCCGCAGGGCATGCGCTTCCTGGTGGACCTGCGCGCGGAACTGCT GCCGCAGCTCAAGGGCGACAAGCGGCTGCTGCCGCTGGACGCGGAGCTCGAGCAGTTGTTCTCCACCTGGTTCGACGTGG CGTTCCTGGAACTCCAACGGCTGTCGTGGGATTCGCCGGCGTCGCTGCTGGAAAAGCTCATCAAGTACGAGGCCGTGCAC GACATCCGCAGCTGGGCCGACCTGAAGAACCGGCTGGACAGCGACCGCCGCTGCTACGGCTTCTTCCATCCGCGTCTGCC GAACGAGCCGCTCATCTTCGTGGAGGTGGCGCTGGTCAACGAGATCTCGGACAGCATCACGCCGCTGCTCGACGAGGACG GCGCGGAGGTGGATATCGCGCGCGCCAATACCGCGATCTTCTATTCGATCAGCAACACGCAGACGGGACTGCGCGGCGTG AGCTTCGGGGATTCGCTCATCAAGCACGTGGTGGAAACGCTGTCGGCCGAGTTCCCGCGGCTGCGGACCTTCGCCACGCT CTCGCCGATTCCGGGTTTCCGCGCATGGCTCGGCAAGCACTGCGCGGGCATGCTCGAAGCCATGGACGACAAGCGCCGCG CCGAACTGGGCCGTGCCATCGGCTCGGAGGCACCGCAGGCCGCGCAGGTGATTGCCGCGGCCGAGAATGCGCTGGAGCTG CCCGTGAAGTCGCCGCTGCGGCAGTGGCTGCTGCACTGCGCGGCGCGCTACCTGGGGCGCGAACTGCAGGACGGCCGCCC TGTGGATGCGGTGGCGCGCTTCCACCTCGGCAACGGCGCGCGCGTGGAGCGGCTCAACTGGGCGGGAGACCCGTCTTCCA AGGGGCAGAAGCAGTCGTTCGGCCTCATGGTGAACTATCTCTACGACCTCAAGCGCATCGACAAGCACCGTGCGCTCCTG GCCCAGGGGCGCGTGCCGGTGTCGGGAGACATCGACAGCCTGTGCCGCGGCTGA
Upstream 100 bases:
>100_bases GGGACGCCGAGGCCGCCGAGCAGGCCATGCGCAACCATCTTCTCGCGCAGCGCGTGGCGCTGCGCGACATCGCCCGCCAC CACCACTCCAGGATCGCTCC
Downstream 100 bases:
>100_bases GTGCCTTTTGCCGGCCATGCCGGCATCGTTTTCGGATATCGGATCGACGGATAAAAAAGAGTGTTCCCGGCGGCATGGCC GCCCCTTCACCACAACGACG
Product: malonyl-CoA decarboxylase
Products: NA
Alternate protein names: Malonyl-CoA Decarboxylase Superfamily; Malonyl-CoA Decarboxylase Protein; Malonyl-CoA Decarboxylase Superfamily Protein; MCD Malonyl-CoA Decarboxylase MCD; Malonyl-CoA Decarboxylase Family Protein; Decarboxylase
Number of amino acids: Translated: 497; Mature: 497
Protein sequence:
>497_residues MNAASEWITRSVARLRTEAPLADLDAAGAAGGGRPPAAAAPAAAPAKAPPPRSTSERLAATLRRGQEALSPRALRRLLAD LQAVAAPQASEVEGGRQAEAVAAWYAEAKPEERRDMWLLMCEQFAPDATRFKTAQKRYEAAAGTEDEAHAEVHLRRALVS PRTRLLQRFAVFPQGMRFLVDLRAELLPQLKGDKRLLPLDAELEQLFSTWFDVAFLELQRLSWDSPASLLEKLIKYEAVH DIRSWADLKNRLDSDRRCYGFFHPRLPNEPLIFVEVALVNEISDSITPLLDEDGAEVDIARANTAIFYSISNTQTGLRGV SFGDSLIKHVVETLSAEFPRLRTFATLSPIPGFRAWLGKHCAGMLEAMDDKRRAELGRAIGSEAPQAAQVIAAAENALEL PVKSPLRQWLLHCAARYLGRELQDGRPVDAVARFHLGNGARVERLNWAGDPSSKGQKQSFGLMVNYLYDLKRIDKHRALL AQGRVPVSGDIDSLCRG
Sequences:
>Translated_497_residues MNAASEWITRSVARLRTEAPLADLDAAGAAGGGRPPAAAAPAAAPAKAPPPRSTSERLAATLRRGQEALSPRALRRLLAD LQAVAAPQASEVEGGRQAEAVAAWYAEAKPEERRDMWLLMCEQFAPDATRFKTAQKRYEAAAGTEDEAHAEVHLRRALVS PRTRLLQRFAVFPQGMRFLVDLRAELLPQLKGDKRLLPLDAELEQLFSTWFDVAFLELQRLSWDSPASLLEKLIKYEAVH DIRSWADLKNRLDSDRRCYGFFHPRLPNEPLIFVEVALVNEISDSITPLLDEDGAEVDIARANTAIFYSISNTQTGLRGV SFGDSLIKHVVETLSAEFPRLRTFATLSPIPGFRAWLGKHCAGMLEAMDDKRRAELGRAIGSEAPQAAQVIAAAENALEL PVKSPLRQWLLHCAARYLGRELQDGRPVDAVARFHLGNGARVERLNWAGDPSSKGQKQSFGLMVNYLYDLKRIDKHRALL AQGRVPVSGDIDSLCRG >Mature_497_residues MNAASEWITRSVARLRTEAPLADLDAAGAAGGGRPPAAAAPAAAPAKAPPPRSTSERLAATLRRGQEALSPRALRRLLAD LQAVAAPQASEVEGGRQAEAVAAWYAEAKPEERRDMWLLMCEQFAPDATRFKTAQKRYEAAAGTEDEAHAEVHLRRALVS PRTRLLQRFAVFPQGMRFLVDLRAELLPQLKGDKRLLPLDAELEQLFSTWFDVAFLELQRLSWDSPASLLEKLIKYEAVH DIRSWADLKNRLDSDRRCYGFFHPRLPNEPLIFVEVALVNEISDSITPLLDEDGAEVDIARANTAIFYSISNTQTGLRGV SFGDSLIKHVVETLSAEFPRLRTFATLSPIPGFRAWLGKHCAGMLEAMDDKRRAELGRAIGSEAPQAAQVIAAAENALEL PVKSPLRQWLLHCAARYLGRELQDGRPVDAVARFHLGNGARVERLNWAGDPSSKGQKQSFGLMVNYLYDLKRIDKHRALL AQGRVPVSGDIDSLCRG
Specific function: Unknown
COG id: COG1593
COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI110349750, Length=343, Percent_Identity=39.067055393586, Blast_Score=207, Evalue=2e-53, Organism=Caenorhabditis elegans, GI71985309, Length=443, Percent_Identity=31.8284424379233, Blast_Score=229, Evalue=2e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54856; Mature: 54856
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAASEWITRSVARLRTEAPLADLDAAGAAGGGRPPAAAAPAAAPAKAPPPRSTSERLAA CCCHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH TLRRGQEALSPRALRRLLADLQAVAAPQASEVEGGRQAEAVAAWYAEAKPEERRDMWLLM HHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHH CEQFAPDATRFKTAQKRYEAAAGTEDEAHAEVHLRRALVSPRTRLLQRFAVFPQGMRFLV HHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH DLRAELLPQLKGDKRLLPLDAELEQLFSTWFDVAFLELQRLSWDSPASLLEKLIKYEAVH HHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH DIRSWADLKNRLDSDRRCYGFFHPRLPNEPLIFVEVALVNEISDSITPLLDEDGAEVDIA HHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEHHHHHHHHHHHCCHHCCCCCEEEEE RANTAIFYSISNTQTGLRGVSFGDSLIKHVVETLSAEFPRLRTFATLSPIPGFRAWLGKH ECCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHH CAGMLEAMDDKRRAELGRAIGSEAPQAAQVIAAAENALELPVKSPLRQWLLHCAARYLGR HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ELQDGRPVDAVARFHLGNGARVERLNWAGDPSSKGQKQSFGLMVNYLYDLKRIDKHRALL HHCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AQGRVPVSGDIDSLCRG HCCCCCCCCCHHHHHCC >Mature Secondary Structure MNAASEWITRSVARLRTEAPLADLDAAGAAGGGRPPAAAAPAAAPAKAPPPRSTSERLAA CCCHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH TLRRGQEALSPRALRRLLADLQAVAAPQASEVEGGRQAEAVAAWYAEAKPEERRDMWLLM HHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHH CEQFAPDATRFKTAQKRYEAAAGTEDEAHAEVHLRRALVSPRTRLLQRFAVFPQGMRFLV HHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH DLRAELLPQLKGDKRLLPLDAELEQLFSTWFDVAFLELQRLSWDSPASLLEKLIKYEAVH HHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH DIRSWADLKNRLDSDRRCYGFFHPRLPNEPLIFVEVALVNEISDSITPLLDEDGAEVDIA HHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEHHHHHHHHHHHCCHHCCCCCEEEEE RANTAIFYSISNTQTGLRGVSFGDSLIKHVVETLSAEFPRLRTFATLSPIPGFRAWLGKH ECCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHH CAGMLEAMDDKRRAELGRAIGSEAPQAAQVIAAAENALELPVKSPLRQWLLHCAARYLGR HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ELQDGRPVDAVARFHLGNGARVERLNWAGDPSSKGQKQSFGLMVNYLYDLKRIDKHRALL HHCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AQGRVPVSGDIDSLCRG HCCCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA