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The map label for this gene is 120610163

Identifier: 120610163

GI number: 120610163

Start: 1633519

End: 1634067

Strand: Direct

Name: 120610163

Synonym: Aave_1476

Alternate gene names: NA

Gene position: 1633519-1634067 (Clockwise)

Preceding gene: 120610162

Following gene: 120610164

Centisome position: 30.52

GC content: 63.02

Gene sequence:

>549_bases
ATGGTGACCTTAAGCAAGACCGGCAAGAGCGGTCAGAAGTTCATTGCCCGCAATCGCGCCCCACGCGTTCAGATCGAATA
CGACGTCGAGATCTACGGCTCCGAGAAGAAGGTGCAGATTCCCTTCGTCATGGGCGTGATGGCGGACCTCTCCGGCAAGC
CGGTGGATCCCCTGCCGGAGATCGCGGACCGCAAGTTCCTCGACATCGACATCGACAACTTCGATGCGCGCATGAAGTCG
ATCAAGCCGCGCGCGTCCTTCAACGTGCCCAACACGCTGACGGGCGATGGCCGCCTGCACATCGATCTGACGTTCGAGAG
CATGGACGACTTCTCCCCGGCCGCCATCGCGCGCAAGGTGGGGGCGCTCAATTCCCTGCTGGAAGCCCGCACCCAGCTGC
ACAACCTGCTGTCCTACATGGACGGCAAGCAGGGCGCTGAGGAACTGATCAGCAAGGTGCTGAAGGACCCGGCGCTGCTC
AAATCGCTGGCCGCGATGCCCAACCGGCCCGCCGGCGGCGTGACCGAGAAGACCGACGACGCTCAGTGA

Upstream 100 bases:

>100_bases
GCTGCCGGACGAGGTGGTGGAGGGCCCGCCGTGCGCCAGGCACAGGCGGTGAAGGCCGGCCGATCTCTGTTTTTAGCCTT
ACGAGAGAGAAGATTTCACT

Downstream 100 bases:

>100_bases
AAGGGACAGCCGCATGAACACGACGACTTCTCTGGACGCGGTGCAGGGCACCCAGACGCTCGAGGGCAGCGAATTCACCT
CGCTGCTGCAGAAGGAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; T6ss S; Conserved Protein; Cytoplasmic Protein SciH; Cytoplasmic Protein; Type VI Secretion System Core Protein; Type VI Secretion System Protein ImpB; Type VI Secretion System Protein; Protein ImpB; Type VI Secretion

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MVTLSKTGKSGQKFIARNRAPRVQIEYDVEIYGSEKKVQIPFVMGVMADLSGKPVDPLPEIADRKFLDIDIDNFDARMKS
IKPRASFNVPNTLTGDGRLHIDLTFESMDDFSPAAIARKVGALNSLLEARTQLHNLLSYMDGKQGAEELISKVLKDPALL
KSLAAMPNRPAGGVTEKTDDAQ

Sequences:

>Translated_182_residues
MVTLSKTGKSGQKFIARNRAPRVQIEYDVEIYGSEKKVQIPFVMGVMADLSGKPVDPLPEIADRKFLDIDIDNFDARMKS
IKPRASFNVPNTLTGDGRLHIDLTFESMDDFSPAAIARKVGALNSLLEARTQLHNLLSYMDGKQGAEELISKVLKDPALL
KSLAAMPNRPAGGVTEKTDDAQ
>Mature_182_residues
MVTLSKTGKSGQKFIARNRAPRVQIEYDVEIYGSEKKVQIPFVMGVMADLSGKPVDPLPEIADRKFLDIDIDNFDARMKS
IKPRASFNVPNTLTGDGRLHIDLTFESMDDFSPAAIARKVGALNSLLEARTQLHNLLSYMDGKQGAEELISKVLKDPALL
KSLAAMPNRPAGGVTEKTDDAQ

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19973; Mature: 19973

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTLSKTGKSGQKFIARNRAPRVQIEYDVEIYGSEKKVQIPFVMGVMADLSGKPVDPLPE
CEECCCCCCCHHHHHHHCCCCEEEEEEEEEEECCCCEEECHHHHHHHHHCCCCCCCCCHH
IADRKFLDIDIDNFDARMKSIKPRASFNVPNTLTGDGRLHIDLTFESMDDFSPAAIARKV
HHCCEEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHH
GALNSLLEARTQLHNLLSYMDGKQGAEELISKVLKDPALLKSLAAMPNRPAGGVTEKTDD
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCC
AQ
CC
>Mature Secondary Structure
MVTLSKTGKSGQKFIARNRAPRVQIEYDVEIYGSEKKVQIPFVMGVMADLSGKPVDPLPE
CEECCCCCCCHHHHHHHCCCCEEEEEEEEEEECCCCEEECHHHHHHHHHCCCCCCCCCHH
IADRKFLDIDIDNFDARMKSIKPRASFNVPNTLTGDGRLHIDLTFESMDDFSPAAIARKV
HHCCEEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHH
GALNSLLEARTQLHNLLSYMDGKQGAEELISKVLKDPALLKSLAAMPNRPAGGVTEKTDD
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCC
AQ
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA