| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is yqiA [H]
Identifier: 120609539
GI number: 120609539
Start: 916590
End: 917198
Strand: Reverse
Name: yqiA [H]
Synonym: Aave_0845
Alternate gene names: 120609539
Gene position: 917198-916590 (Counterclockwise)
Preceding gene: 120609541
Following gene: 120609537
Centisome position: 17.14
GC content: 71.76
Gene sequence:
>609_bases ATGCCGCACGCCACCACCCACCTGCTCTACCTGCACGGCTTCCGTTCGTCTCCCCGCTCGGCCAAGGCGCGGCAGATGGC GGAATGGATGGCGGCACACCGGCCGGACGCGCACTTCTGGTGCCCGCAACTGCCTCCCTCGCCCCGGGAGGCGATGGCGC TGGTCGCGCAGGGCATCGCGGACTGGCCTGCCGAGCGCATGGCCGTGGTGGGCTCGTCGCTGGGCGGGTTCTACGCGAGC TGGGTGGCCCTGCAGAAGCCGGGCTGCACGAGCGTGGTGCTGAACCCGGCGGTGAACCCGGCCCGGGACCTGGAGCGCTA CATCGGCGAGCAGACGGCGTGGCACGACCCCGCCGAGCACTTCTACTTCCGGCCGGAATACATCGCCGAACTGCGGGCAC TGGACGTGCGGGGCCTTGACCCGGCCGGCCCGCAACTGGCCATCATCGCCAAGGGCGACGAGCTCCTGGACTGGCGGGAA ATGGCGGCCCGCTACGCCGGCGCGCAGGTGCGGCGGCTCGAAGGGGGCGACCACGCGTTGAGCGCGTTCCCGGACCACCT CGGCGAAGTGGTGGCGTTCTGCGGCCTGGTGGATCGGGGCCTGTTGTAG
Upstream 100 bases:
>100_bases GCCATTATCGGCGCCGCCCCGCCGGGCCGGCCCCCGGCACAATGCCGGTCCACCCACGACGCCTCCCGCCCGTCCCACGC ACTTCGCCACCGCTCCCCCC
Downstream 100 bases:
>100_bases CGTTAACAGGCCCTAGCGCAGGGGGCGGCTCGGCCGCGGTCCGAGAAGGCCCGGCCGTGGTCCGGACAGGCTCGTCGCCG GCTGGACCGCGGAAGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MPHATTHLLYLHGFRSSPRSAKARQMAEWMAAHRPDAHFWCPQLPPSPREAMALVAQGIADWPAERMAVVGSSLGGFYAS WVALQKPGCTSVVLNPAVNPARDLERYIGEQTAWHDPAEHFYFRPEYIAELRALDVRGLDPAGPQLAIIAKGDELLDWRE MAARYAGAQVRRLEGGDHALSAFPDHLGEVVAFCGLVDRGLL
Sequences:
>Translated_202_residues MPHATTHLLYLHGFRSSPRSAKARQMAEWMAAHRPDAHFWCPQLPPSPREAMALVAQGIADWPAERMAVVGSSLGGFYAS WVALQKPGCTSVVLNPAVNPARDLERYIGEQTAWHDPAEHFYFRPEYIAELRALDVRGLDPAGPQLAIIAKGDELLDWRE MAARYAGAQVRRLEGGDHALSAFPDHLGEVVAFCGLVDRGLL >Mature_201_residues PHATTHLLYLHGFRSSPRSAKARQMAEWMAAHRPDAHFWCPQLPPSPREAMALVAQGIADWPAERMAVVGSSLGGFYASW VALQKPGCTSVVLNPAVNPARDLERYIGEQTAWHDPAEHFYFRPEYIAELRALDVRGLDPAGPQLAIIAKGDELLDWREM AARYAGAQVRRLEGGDHALSAFPDHLGEVVAFCGLVDRGLL
Specific function: Displays esterase activity toward palmitoyl-CoA and pNP- butyrate [H]
COG id: COG3150
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789409, Length=189, Percent_Identity=38.0952380952381, Blast_Score=140, Evalue=6e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008886 [H]
Pfam domain/function: PF05728 UPF0227 [H]
EC number: NA
Molecular weight: Translated: 22290; Mature: 22158
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHATTHLLYLHGFRSSPRSAKARQMAEWMAAHRPDAHFWCPQLPPSPREAMALVAQGIA CCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHH DWPAERMAVVGSSLGGFYASWVALQKPGCTSVVLNPAVNPARDLERYIGEQTAWHDPAEH HCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCHHHH FYFRPEYIAELRALDVRGLDPAGPQLAIIAKGDELLDWREMAARYAGAQVRRLEGGDHAL CEECHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCHHHEECCCCCHHH SAFPDHLGEVVAFCGLVDRGLL HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PHATTHLLYLHGFRSSPRSAKARQMAEWMAAHRPDAHFWCPQLPPSPREAMALVAQGIA CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHH DWPAERMAVVGSSLGGFYASWVALQKPGCTSVVLNPAVNPARDLERYIGEQTAWHDPAEH HCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCHHHH FYFRPEYIAELRALDVRGLDPAGPQLAIIAKGDELLDWREMAARYAGAQVRRLEGGDHAL CEECHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCHHHEECCCCCHHH SAFPDHLGEVVAFCGLVDRGLL HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]