| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is aroE
Identifier: 120609535
GI number: 120609535
Start: 910882
End: 911727
Strand: Reverse
Name: aroE
Synonym: Aave_0841
Alternate gene names: 120609535
Gene position: 911727-910882 (Counterclockwise)
Preceding gene: 120609536
Following gene: 120609534
Centisome position: 17.03
GC content: 75.41
Gene sequence:
>846_bases ATGACGACGACATCCGCCCCGGACGTGTACTGCGTGATGGGCCATCCCGTGGAGCACAGCCGCTCGCCGTGGATCCATGC GCGCTTCGCCGAACTCACCGGCCAGCGGATCGCCTACACGCGGCGGCTGGTGCCGCTCGACGGCTTCGCCCGGGCGCTCG CCGATTTCGCGGCGGCCGGCGGGGCGGGCTGCAACGTGACGGTGCCGTTCAAGCACGACGCGGCCCGGCTCGCGACCCAC GCCAGCGACCGCGTGCGGCGCGCGGGGGCAGCCAACACCCTGAGCTTCCGGGCCGACGGCACGGTGCATGCCGAGAACAC CGATGGCCTGGGCCTGGTGGCCGACATCGTGGTCAATGCGGGCGTGGCGCTCGCGGGCCGCGACGTGCTGCTCGTGGGTG CCGGCGGCGCGGCCGCGGGCGTGCTCGCCCCGCTGCTGGACCAGGCCCCCCGGCGGATCACCGTGGCGAACCGCACCGAA GCGCGCGCGCAGGCCCTGGTGCAGGCGCACGCGGACCTCGCGGCCAGCCGGCAGGTGGTGCTCGAGGCGCTGCCGATCGG CCAGCCCGGCACCGGCTTCGACGTGGTCATCAACGCCACGGCCAGCAGCCTGGCCGGTGGCGAGGTGCCCGTGCCGGACA CGGTGCTGCGCGAGGGCACCCTGGCCTACGACATGATGTACGGCCCCGCCGCGCAGGGTTTCATGGACTGGGCGCGCGCC CACGGCGCGGTGCCGCGCGACGGGCTGGGCATGCTGGTGGAGCAGGCCGCCGAGGCGTTCGCCGTCTGGCGCGGCGTGCG CCCCCCGGCCGCGCAGGTGCTGCAGGAACTGCGCGCGCAGCTATGA
Upstream 100 bases:
>100_bases CGCGCTTCAAGTTCACGCGCGAGCAGACGCTGGAGACCAGCGTGCGCTGACGCACCCCGGCCCGCCCGCTTTCCCGACGA CTTTCCCGCCCTCTGCCGCC
Downstream 100 bases:
>100_bases AGGCCTTGCTGCGCTGGATCGGCTGCCTGCTGCTGGCCGGCGTGGCCCTGCAGCTGTTCTTCGTGCTGCGCATCGCCGCG ATGGCGGCCGTCGATCCGCA
Product: shikimate 5-dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MTTTSAPDVYCVMGHPVEHSRSPWIHARFAELTGQRIAYTRRLVPLDGFARALADFAAAGGAGCNVTVPFKHDAARLATH ASDRVRRAGAANTLSFRADGTVHAENTDGLGLVADIVVNAGVALAGRDVLLVGAGGAAAGVLAPLLDQAPRRITVANRTE ARAQALVQAHADLAASRQVVLEALPIGQPGTGFDVVINATASSLAGGEVPVPDTVLREGTLAYDMMYGPAAQGFMDWARA HGAVPRDGLGMLVEQAAEAFAVWRGVRPPAAQVLQELRAQL
Sequences:
>Translated_281_residues MTTTSAPDVYCVMGHPVEHSRSPWIHARFAELTGQRIAYTRRLVPLDGFARALADFAAAGGAGCNVTVPFKHDAARLATH ASDRVRRAGAANTLSFRADGTVHAENTDGLGLVADIVVNAGVALAGRDVLLVGAGGAAAGVLAPLLDQAPRRITVANRTE ARAQALVQAHADLAASRQVVLEALPIGQPGTGFDVVINATASSLAGGEVPVPDTVLREGTLAYDMMYGPAAQGFMDWARA HGAVPRDGLGMLVEQAAEAFAVWRGVRPPAAQVLQELRAQL >Mature_280_residues TTTSAPDVYCVMGHPVEHSRSPWIHARFAELTGQRIAYTRRLVPLDGFARALADFAAAGGAGCNVTVPFKHDAARLATHA SDRVRRAGAANTLSFRADGTVHAENTDGLGLVADIVVNAGVALAGRDVLLVGAGGAAAGVLAPLLDQAPRRITVANRTEA RAQALVQAHADLAASRQVVLEALPIGQPGTGFDVVINATASSLAGGEVPVPDTVLREGTLAYDMMYGPAAQGFMDWARAH GAVPRDGLGMLVEQAAEAFAVWRGVRPPAAQVLQELRAQL
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; fourth step. [C]
COG id: COG0169
COG function: function code E; Shikimate 5-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate dehydrogenase family
Homologues:
Organism=Escherichia coli, GI1789675, Length=277, Percent_Identity=39.7111913357401, Blast_Score=191, Evalue=4e-50, Organism=Escherichia coli, GI1787983, Length=290, Percent_Identity=28.2758620689655, Blast_Score=89, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROE_ACIAC (A1TKF1)
Other databases:
- EMBL: CP000512 - RefSeq: YP_969213.1 - ProteinModelPortal: A1TKF1 - SMR: A1TKF1 - STRING: A1TKF1 - GeneID: 4668655 - GenomeReviews: CP000512_GR - KEGG: aav:Aave_0841 - NMPDR: fig|397945.5.peg.730 - eggNOG: COG0169 - HOGENOM: HBG553408 - OMA: DQYVVFG - PhylomeDB: A1TKF1 - ProtClustDB: PRK00258 - BioCyc: AAVE397945:AAVE_0841-MONOMER - GO: GO:0005737 - HAMAP: MF_00222 - InterPro: IPR016040 - InterPro: IPR011342 - InterPro: IPR013708 - InterPro: IPR022893 - InterPro: IPR006151 - Gene3D: G3DSA:3.40.50.720 - TIGRFAMs: TIGR00507
Pfam domain/function: PF01488 Shikimate_DH; PF08501 Shikimate_dh_N
EC number: =1.1.1.25
Molecular weight: Translated: 29219; Mature: 29087
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: ACT_SITE 71-71
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTSAPDVYCVMGHPVEHSRSPWIHARFAELTGQRIAYTRRLVPLDGFARALADFAAAG CCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHCC GAGCNVTVPFKHDAARLATHASDRVRRAGAANTLSFRADGTVHAENTDGLGLVADIVVNA CCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCHHHHHHHHHC GVALAGRDVLLVGAGGAAAGVLAPLLDQAPRRITVANRTEARAQALVQAHADLAASRQVV CEEEECCCEEEEECCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH LEALPIGQPGTGFDVVINATASSLAGGEVPVPDTVLREGTLAYDMMYGPAAQGFMDWARA HHHCCCCCCCCCEEEEEECCHHHCCCCCCCCCHHHHHCCCEEEEECCCCHHHHHHHHHHH HGAVPRDGLGMLVEQAAEAFAVWRGVRPPAAQVLQELRAQL CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TTTSAPDVYCVMGHPVEHSRSPWIHARFAELTGQRIAYTRRLVPLDGFARALADFAAAG CCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHCC GAGCNVTVPFKHDAARLATHASDRVRRAGAANTLSFRADGTVHAENTDGLGLVADIVVNA CCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCHHHHHHHHHC GVALAGRDVLLVGAGGAAAGVLAPLLDQAPRRITVANRTEARAQALVQAHADLAASRQVV CEEEECCCEEEEECCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH LEALPIGQPGTGFDVVINATASSLAGGEVPVPDTVLREGTLAYDMMYGPAAQGFMDWARA HHHCCCCCCCCCEEEEEECCHHHCCCCCCCCCHHHHHCCCEEEEECCCCHHHHHHHHHHH HGAVPRDGLGMLVEQAAEAFAVWRGVRPPAAQVLQELRAQL CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA