| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609473
Identifier: 120609473
GI number: 120609473
Start: 836012
End: 837094
Strand: Reverse
Name: 120609473
Synonym: Aave_0779
Alternate gene names: NA
Gene position: 837094-836012 (Counterclockwise)
Preceding gene: 120609474
Following gene: 120609470
Centisome position: 15.64
GC content: 71.65
Gene sequence:
>1083_bases ATGCCCCTGCCCGCCGAAGCATCGACCTCCCGCCAGACCCGCGCCTTCGCCAAGGCTGCGATGGGGGATGCCGCCGTGCG CCGCCGCCGCACCATCGCCCTGGGCTGCGCGCTGCTCGCAGGCGCCGCGCTCGCGGCCTGGCAGGCCCCCGCGCGCGCCG ACACGTGGCCGTCCAAGCCCGTGCGCATCGTCGTGCCCTTCGCCCCGGGCGGCACCACCGACATCCTCGCGCGGGCCGTC GCGCCCGAACTGAGCCGTGCCTTCGGCCAGCAGTTCGTGGTGGACAACCGCGCGGGCGCGGGCGGCAACATCGGCGCGGA GATCGTCGCCAGGTCGCCGGCCGACGGCTACACGCTGCTCATGGGCACCGTGGGCACGCACGGCATCAACCGCGCGCTCT ACGGCAGGCTGCCCTACGACCCCATCAAGGACTTCGTGCCGATCACGCTGGTGGCCGCGGTGCCGAACGTGATGGAGGTC AACGCCGAGAAGGCGCGCGCGCAGGGCATATCGACCGTGCAGGACTTCATCCGCCACGCCAAGGCCCACCCCGGGCAGCT CAACATGGCCTCCAGCGGCAACGGCACCTCCATCCACCTCGCGGGCGAACTGTTCAAGAGCATGACCGGCACCTACATGC TGCACATGCCGTACCGTGGCTCGGGCCCGGCCCTGCTGGACATGGTGGGCGGCAACATGGACGTGATGTTCGACAACCTG CCCTCTTCCATGGCGCAGATCAAGGCAGGCAAGCTCAAGGCGCTGGCGGTGACCAGCGCGACCCGCTCCCCGGCGCTGCC GGACGTGCCCACCGTGGAAGAGGCCGGCGGCCCGGCGCTCAAGGGCTACGAGGCCAGCTCGTGGTTCGGCCTGCTGGCTC CGGCGGACACGCCCGCCGACATCGTGAACCGCATCCAGCAGGAAACCGCCAAGGCACTGGCAACGCCCGCGGTGAAGGAG CGCATGCTGGCGCAGGGCGCCATTCCCGGCGGCAACACGCCGGCGGAGTTCGCGCGGCACATCCAGGCCGAGCATGCCAA GTGGGCCCGCGTGGTGCAGGCCTCGGGCGCCAAGGTGGACTGA
Upstream 100 bases:
>100_bases GTTATCCATCTGCCATGGCGCGGCGGGCCCGCCTACAACGGGGACATACGGCCCCGCACGGCGGGGCCTCCGATCCACGG TTTCCGAAAGGCCCTCTACC
Downstream 100 bases:
>100_bases GCCGCGGCGCTACCGGGCGCTCGCCGGGGCGCTACCAGGTGACCTCGCGGCCTTCGGCGGCGCTGCGGCGCAGCATGTCG ATGAAGGGGGCCGCGCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MPLPAEASTSRQTRAFAKAAMGDAAVRRRRTIALGCALLAGAALAAWQAPARADTWPSKPVRIVVPFAPGGTTDILARAV APELSRAFGQQFVVDNRAGAGGNIGAEIVARSPADGYTLLMGTVGTHGINRALYGRLPYDPIKDFVPITLVAAVPNVMEV NAEKARAQGISTVQDFIRHAKAHPGQLNMASSGNGTSIHLAGELFKSMTGTYMLHMPYRGSGPALLDMVGGNMDVMFDNL PSSMAQIKAGKLKALAVTSATRSPALPDVPTVEEAGGPALKGYEASSWFGLLAPADTPADIVNRIQQETAKALATPAVKE RMLAQGAIPGGNTPAEFARHIQAEHAKWARVVQASGAKVD
Sequences:
>Translated_360_residues MPLPAEASTSRQTRAFAKAAMGDAAVRRRRTIALGCALLAGAALAAWQAPARADTWPSKPVRIVVPFAPGGTTDILARAV APELSRAFGQQFVVDNRAGAGGNIGAEIVARSPADGYTLLMGTVGTHGINRALYGRLPYDPIKDFVPITLVAAVPNVMEV NAEKARAQGISTVQDFIRHAKAHPGQLNMASSGNGTSIHLAGELFKSMTGTYMLHMPYRGSGPALLDMVGGNMDVMFDNL PSSMAQIKAGKLKALAVTSATRSPALPDVPTVEEAGGPALKGYEASSWFGLLAPADTPADIVNRIQQETAKALATPAVKE RMLAQGAIPGGNTPAEFARHIQAEHAKWARVVQASGAKVD >Mature_359_residues PLPAEASTSRQTRAFAKAAMGDAAVRRRRTIALGCALLAGAALAAWQAPARADTWPSKPVRIVVPFAPGGTTDILARAVA PELSRAFGQQFVVDNRAGAGGNIGAEIVARSPADGYTLLMGTVGTHGINRALYGRLPYDPIKDFVPITLVAAVPNVMEVN AEKARAQGISTVQDFIRHAKAHPGQLNMASSGNGTSIHLAGELFKSMTGTYMLHMPYRGSGPALLDMVGGNMDVMFDNLP SSMAQIKAGKLKALAVTSATRSPALPDVPTVEEAGGPALKGYEASSWFGLLAPADTPADIVNRIQQETAKALATPAVKER MLAQGAIPGGNTPAEFARHIQAEHAKWARVVQASGAKVD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 37588; Mature: 37456
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPAEASTSRQTRAFAKAAMGDAAVRRRRTIALGCALLAGAALAAWQAPARADTWPSKP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC VRIVVPFAPGGTTDILARAVAPELSRAFGQQFVVDNRAGAGGNIGAEIVARSPADGYTLL EEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCCCEEEE MGTVGTHGINRALYGRLPYDPIKDFVPITLVAAVPNVMEVNAEKARAQGISTVQDFIRHA EECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHCCHHHHHHCCHHHHHHHHHHH KAHPGQLNMASSGNGTSIHLAGELFKSMTGTYMLHMPYRGSGPALLDMVGGNMDVMFDNL CCCCCCEEECCCCCCCEEEEHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCEEEEECCC PSSMAQIKAGKLKALAVTSATRSPALPDVPTVEEAGGPALKGYEASSWFGLLAPADTPAD CHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEECCCCCHHH IVNRIQQETAKALATPAVKERMLAQGAIPGGNTPAEFARHIQAEHAKWARVVQASGAKVD HHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PLPAEASTSRQTRAFAKAAMGDAAVRRRRTIALGCALLAGAALAAWQAPARADTWPSKP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC VRIVVPFAPGGTTDILARAVAPELSRAFGQQFVVDNRAGAGGNIGAEIVARSPADGYTLL EEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCCCEEEE MGTVGTHGINRALYGRLPYDPIKDFVPITLVAAVPNVMEVNAEKARAQGISTVQDFIRHA EECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHCCHHHHHHCCHHHHHHHHHHH KAHPGQLNMASSGNGTSIHLAGELFKSMTGTYMLHMPYRGSGPALLDMVGGNMDVMFDNL CCCCCCEEECCCCCCCEEEEHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCEEEEECCC PSSMAQIKAGKLKALAVTSATRSPALPDVPTVEEAGGPALKGYEASSWFGLLAPADTPAD CHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEECCCCCHHH IVNRIQQETAKALATPAVKERMLAQGAIPGGNTPAEFARHIQAEHAKWARVVQASGAKVD HHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]