Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120609473

Identifier: 120609473

GI number: 120609473

Start: 836012

End: 837094

Strand: Reverse

Name: 120609473

Synonym: Aave_0779

Alternate gene names: NA

Gene position: 837094-836012 (Counterclockwise)

Preceding gene: 120609474

Following gene: 120609470

Centisome position: 15.64

GC content: 71.65

Gene sequence:

>1083_bases
ATGCCCCTGCCCGCCGAAGCATCGACCTCCCGCCAGACCCGCGCCTTCGCCAAGGCTGCGATGGGGGATGCCGCCGTGCG
CCGCCGCCGCACCATCGCCCTGGGCTGCGCGCTGCTCGCAGGCGCCGCGCTCGCGGCCTGGCAGGCCCCCGCGCGCGCCG
ACACGTGGCCGTCCAAGCCCGTGCGCATCGTCGTGCCCTTCGCCCCGGGCGGCACCACCGACATCCTCGCGCGGGCCGTC
GCGCCCGAACTGAGCCGTGCCTTCGGCCAGCAGTTCGTGGTGGACAACCGCGCGGGCGCGGGCGGCAACATCGGCGCGGA
GATCGTCGCCAGGTCGCCGGCCGACGGCTACACGCTGCTCATGGGCACCGTGGGCACGCACGGCATCAACCGCGCGCTCT
ACGGCAGGCTGCCCTACGACCCCATCAAGGACTTCGTGCCGATCACGCTGGTGGCCGCGGTGCCGAACGTGATGGAGGTC
AACGCCGAGAAGGCGCGCGCGCAGGGCATATCGACCGTGCAGGACTTCATCCGCCACGCCAAGGCCCACCCCGGGCAGCT
CAACATGGCCTCCAGCGGCAACGGCACCTCCATCCACCTCGCGGGCGAACTGTTCAAGAGCATGACCGGCACCTACATGC
TGCACATGCCGTACCGTGGCTCGGGCCCGGCCCTGCTGGACATGGTGGGCGGCAACATGGACGTGATGTTCGACAACCTG
CCCTCTTCCATGGCGCAGATCAAGGCAGGCAAGCTCAAGGCGCTGGCGGTGACCAGCGCGACCCGCTCCCCGGCGCTGCC
GGACGTGCCCACCGTGGAAGAGGCCGGCGGCCCGGCGCTCAAGGGCTACGAGGCCAGCTCGTGGTTCGGCCTGCTGGCTC
CGGCGGACACGCCCGCCGACATCGTGAACCGCATCCAGCAGGAAACCGCCAAGGCACTGGCAACGCCCGCGGTGAAGGAG
CGCATGCTGGCGCAGGGCGCCATTCCCGGCGGCAACACGCCGGCGGAGTTCGCGCGGCACATCCAGGCCGAGCATGCCAA
GTGGGCCCGCGTGGTGCAGGCCTCGGGCGCCAAGGTGGACTGA

Upstream 100 bases:

>100_bases
GTTATCCATCTGCCATGGCGCGGCGGGCCCGCCTACAACGGGGACATACGGCCCCGCACGGCGGGGCCTCCGATCCACGG
TTTCCGAAAGGCCCTCTACC

Downstream 100 bases:

>100_bases
GCCGCGGCGCTACCGGGCGCTCGCCGGGGCGCTACCAGGTGACCTCGCGGCCTTCGGCGGCGCTGCGGCGCAGCATGTCG
ATGAAGGGGGCCGCGCGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MPLPAEASTSRQTRAFAKAAMGDAAVRRRRTIALGCALLAGAALAAWQAPARADTWPSKPVRIVVPFAPGGTTDILARAV
APELSRAFGQQFVVDNRAGAGGNIGAEIVARSPADGYTLLMGTVGTHGINRALYGRLPYDPIKDFVPITLVAAVPNVMEV
NAEKARAQGISTVQDFIRHAKAHPGQLNMASSGNGTSIHLAGELFKSMTGTYMLHMPYRGSGPALLDMVGGNMDVMFDNL
PSSMAQIKAGKLKALAVTSATRSPALPDVPTVEEAGGPALKGYEASSWFGLLAPADTPADIVNRIQQETAKALATPAVKE
RMLAQGAIPGGNTPAEFARHIQAEHAKWARVVQASGAKVD

Sequences:

>Translated_360_residues
MPLPAEASTSRQTRAFAKAAMGDAAVRRRRTIALGCALLAGAALAAWQAPARADTWPSKPVRIVVPFAPGGTTDILARAV
APELSRAFGQQFVVDNRAGAGGNIGAEIVARSPADGYTLLMGTVGTHGINRALYGRLPYDPIKDFVPITLVAAVPNVMEV
NAEKARAQGISTVQDFIRHAKAHPGQLNMASSGNGTSIHLAGELFKSMTGTYMLHMPYRGSGPALLDMVGGNMDVMFDNL
PSSMAQIKAGKLKALAVTSATRSPALPDVPTVEEAGGPALKGYEASSWFGLLAPADTPADIVNRIQQETAKALATPAVKE
RMLAQGAIPGGNTPAEFARHIQAEHAKWARVVQASGAKVD
>Mature_359_residues
PLPAEASTSRQTRAFAKAAMGDAAVRRRRTIALGCALLAGAALAAWQAPARADTWPSKPVRIVVPFAPGGTTDILARAVA
PELSRAFGQQFVVDNRAGAGGNIGAEIVARSPADGYTLLMGTVGTHGINRALYGRLPYDPIKDFVPITLVAAVPNVMEVN
AEKARAQGISTVQDFIRHAKAHPGQLNMASSGNGTSIHLAGELFKSMTGTYMLHMPYRGSGPALLDMVGGNMDVMFDNLP
SSMAQIKAGKLKALAVTSATRSPALPDVPTVEEAGGPALKGYEASSWFGLLAPADTPADIVNRIQQETAKALATPAVKER
MLAQGAIPGGNTPAEFARHIQAEHAKWARVVQASGAKVD

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 37588; Mature: 37456

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLPAEASTSRQTRAFAKAAMGDAAVRRRRTIALGCALLAGAALAAWQAPARADTWPSKP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
VRIVVPFAPGGTTDILARAVAPELSRAFGQQFVVDNRAGAGGNIGAEIVARSPADGYTLL
EEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCCCEEEE
MGTVGTHGINRALYGRLPYDPIKDFVPITLVAAVPNVMEVNAEKARAQGISTVQDFIRHA
EECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHCCHHHHHHCCHHHHHHHHHHH
KAHPGQLNMASSGNGTSIHLAGELFKSMTGTYMLHMPYRGSGPALLDMVGGNMDVMFDNL
CCCCCCEEECCCCCCCEEEEHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCEEEEECCC
PSSMAQIKAGKLKALAVTSATRSPALPDVPTVEEAGGPALKGYEASSWFGLLAPADTPAD
CHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEECCCCCHHH
IVNRIQQETAKALATPAVKERMLAQGAIPGGNTPAEFARHIQAEHAKWARVVQASGAKVD
HHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PLPAEASTSRQTRAFAKAAMGDAAVRRRRTIALGCALLAGAALAAWQAPARADTWPSKP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
VRIVVPFAPGGTTDILARAVAPELSRAFGQQFVVDNRAGAGGNIGAEIVARSPADGYTLL
EEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCCCEEEE
MGTVGTHGINRALYGRLPYDPIKDFVPITLVAAVPNVMEVNAEKARAQGISTVQDFIRHA
EECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHCCHHHHHHCCHHHHHHHHHHH
KAHPGQLNMASSGNGTSIHLAGELFKSMTGTYMLHMPYRGSGPALLDMVGGNMDVMFDNL
CCCCCCEEECCCCCCCEEEEHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCEEEEECCC
PSSMAQIKAGKLKALAVTSATRSPALPDVPTVEEAGGPALKGYEASSWFGLLAPADTPAD
CHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEECCCCCHHH
IVNRIQQETAKALATPAVKERMLAQGAIPGGNTPAEFARHIQAEHAKWARVVQASGAKVD
HHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]