| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120609460
Identifier: 120609460
GI number: 120609460
Start: 821818
End: 822471
Strand: Direct
Name: 120609460
Synonym: Aave_0766
Alternate gene names: NA
Gene position: 821818-822471 (Clockwise)
Preceding gene: 120609459
Following gene: 120609462
Centisome position: 15.35
GC content: 63.0
Gene sequence:
>654_bases ATGAGCCGCATCTATGTGCTGGTGGAGGGGCAGACCGAGGAAGCTTTTGTCCGCGAATTGCTGGTACCGCACTATGCCCG GCTCGGCCGCTTCCTGACGCCCATCATCGTCAGTACCAGCCCGGGGCACAAGGGAGGGGTGGTGAGCTACGCCAAGGTCA AGCCCCAGATTGTCCGGCTGTGCAGGCAGGACGAAGAGGCGCATGTCACGACGATGTTCGATCTGTACGCCCTGCCCACG GATTTTCCCGGCAAGGCCGCTGCAGCCTATCCGGCGCACGCCAGCGGTGCGGCAAAAGCGCTCTACCTGGAAAGCCTGCT GTCGCAGGACATACGCCAGCCCAACTTTCTGCCTTATCTGATGGTGCATGAGTACGAGGCCCTGCTGCTCTCCTGTCCCG AGCAGTTCGCGGAGTGGACGAGCGATGGCACGGTGCCTTCCACGTTGGTCAGGGCTGTGGCAGATGCCGGGGCGCCCGAG GACGTGAATGGTGGCCCACATACGGCCCCATCCAAGCGCATCCTGGCTGTCATGCCGGAGTACCAGAAGACCTTTCATGG ACCGCTGATCGCATGCGACATCGGGTTGGACGCCATGAGGGCGGCCTGCCCTCATTTCCACGCCTGGCTGCAGGCCGTCG AGGTGCTTCCTTGA
Upstream 100 bases:
>100_bases CCTTTGCGCGTCCCGATGCCGACTCGCTGGCTGAATGGCTTCAGGAATACACCCTGGGTGAGCTGTGGAAGAAAAACATC CTCGGAGGGAGGCCTCAGCG
Downstream 100 bases:
>100_bases GCCCTTGAGCGTTCCGGTGGACGAGCAGGGCCTGTCGTCAGTCCCCCTGGGCCTGTACTTCCACCGCGCAGTCATAGAAC GTCGGCGCCGCCCCCAGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MSRIYVLVEGQTEEAFVRELLVPHYARLGRFLTPIIVSTSPGHKGGVVSYAKVKPQIVRLCRQDEEAHVTTMFDLYALPT DFPGKAAAAYPAHASGAAKALYLESLLSQDIRQPNFLPYLMVHEYEALLLSCPEQFAEWTSDGTVPSTLVRAVADAGAPE DVNGGPHTAPSKRILAVMPEYQKTFHGPLIACDIGLDAMRAACPHFHAWLQAVEVLP
Sequences:
>Translated_217_residues MSRIYVLVEGQTEEAFVRELLVPHYARLGRFLTPIIVSTSPGHKGGVVSYAKVKPQIVRLCRQDEEAHVTTMFDLYALPT DFPGKAAAAYPAHASGAAKALYLESLLSQDIRQPNFLPYLMVHEYEALLLSCPEQFAEWTSDGTVPSTLVRAVADAGAPE DVNGGPHTAPSKRILAVMPEYQKTFHGPLIACDIGLDAMRAACPHFHAWLQAVEVLP >Mature_216_residues SRIYVLVEGQTEEAFVRELLVPHYARLGRFLTPIIVSTSPGHKGGVVSYAKVKPQIVRLCRQDEEAHVTTMFDLYALPTD FPGKAAAAYPAHASGAAKALYLESLLSQDIRQPNFLPYLMVHEYEALLLSCPEQFAEWTSDGTVPSTLVRAVADAGAPED VNGGPHTAPSKRILAVMPEYQKTFHGPLIACDIGLDAMRAACPHFHAWLQAVEVLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23738; Mature: 23606
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIYVLVEGQTEEAFVRELLVPHYARLGRFLTPIIVSTSPGHKGGVVSYAKVKPQIVRL CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEHHHHCHHHHHH CRQDEEAHVTTMFDLYALPTDFPGKAAAAYPAHASGAAKALYLESLLSQDIRQPNFLPYL HHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHH MVHEYEALLLSCPEQFAEWTSDGTVPSTLVRAVADAGAPEDVNGGPHTAPSKRILAVMPE HHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCH YQKTFHGPLIACDIGLDAMRAACPHFHAWLQAVEVLP HHHHHCCCEEEEECCHHHHHHHCHHHHHHHHHHHCCC >Mature Secondary Structure SRIYVLVEGQTEEAFVRELLVPHYARLGRFLTPIIVSTSPGHKGGVVSYAKVKPQIVRL CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEHHHHCHHHHHH CRQDEEAHVTTMFDLYALPTDFPGKAAAAYPAHASGAAKALYLESLLSQDIRQPNFLPYL HHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHH MVHEYEALLLSCPEQFAEWTSDGTVPSTLVRAVADAGAPEDVNGGPHTAPSKRILAVMPE HHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCH YQKTFHGPLIACDIGLDAMRAACPHFHAWLQAVEVLP HHHHHCCCEEEEECCHHHHHHHCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA