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The map label for this gene is yeeY [H]

Identifier: 120609451

GI number: 120609451

Start: 811995

End: 812897

Strand: Reverse

Name: yeeY [H]

Synonym: Aave_0757

Alternate gene names: 120609451

Gene position: 812897-811995 (Counterclockwise)

Preceding gene: 120609461

Following gene: 120609449

Centisome position: 15.19

GC content: 70.43

Gene sequence:

>903_bases
ATGCTGAAACTCTCCCTGGAAGCCATCGAACTGGTGGACGCCATCGCCCGGCACGGCTCGTTCGCCGGGGCGTCCGAACG
GCTGCACAAGGTGCCGTCCACTATCTCGTACGCCATCGCCCGGCTGGAAGAGCAGCTGGGCTTCGCCCTGTTCACCCGCA
ACGGCCCGCGCGTGACGCTCACCCCCGCGGGGCAGGAAATGATCAAGGAGGGCCGCTGGCTGCTGGCCGGCGCCAGGCAG
CTGGAATCGCGCATGCGGCAGATCGCCACGGGCTTCGAATCCGAAGTGCGGCTGGTGCACGATTCACTGATCCCCACGCA
TGCCTTCAACCAGGACATCTGCGCCTTCGAGGACCTGAACTGCGGCACGCGGCTGCGCATCGGCTGCGACGTGATGACCG
GCACCTGGGAAGCCCTGCGCGAGGGGCGCGCCGACATCGTGGTGGCCGCCGGCGAGGGCCCGGCCGGCGGCGGCTACAAG
GCCGTGCCGGTGGGCACGCTGCAGTTCGTGTTCTGCGTGACGGCCACGCACCCGCTGGCCCGGCTCCAGCGCCCGCTCAC
GCGCGGCGACCTGCTGGAGCACACCGCCGTGGTGGTGGGCGACGGCGCACGGTCATCGAACGAGCGCACCATCGGCCTGC
TGTCGGGCCAGCGCCGCATCGTCGTGCCGCACATGCACGCCAAGATCGCCGCGCAGGCCGCGGGCCTGGGCCATGGTTTC
GTGCCCCGCGCCTGCGTGCGCACGGAACTGGAGACCGGCATCCTGGTGGAACTGGAAGTGGAAGCGCCGCGCCCGGACGA
GCCCTTCTTCCTGGCCTGGCGGCCCGACCACATGGGAGAGGCGCTCAAGTGGTGGCGGCAGCGGCTGGACCGGCAGTTGT
TGCCGGGGATCCTGCCGTACTGA

Upstream 100 bases:

>100_bases
GCGGTGAAGAAAGTATCCGGCGCCTCGATGCGCGCCAGGTTGAAAGGTTTGGCCTTCCATCATCGATAATTTCGATGATC
CAGATCAAGCCATCCCGACC

Downstream 100 bases:

>100_bases
CCGGGGACCCGCTGGCGCCTACCGCCGGGCCGCCACCACCTTCCCGCCCGCCACATCCCGCAGCACCTCCATGAACGCCT
GCGCCGCCGGCGTCGGTGTC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MLKLSLEAIELVDAIARHGSFAGASERLHKVPSTISYAIARLEEQLGFALFTRNGPRVTLTPAGQEMIKEGRWLLAGARQ
LESRMRQIATGFESEVRLVHDSLIPTHAFNQDICAFEDLNCGTRLRIGCDVMTGTWEALREGRADIVVAAGEGPAGGGYK
AVPVGTLQFVFCVTATHPLARLQRPLTRGDLLEHTAVVVGDGARSSNERTIGLLSGQRRIVVPHMHAKIAAQAAGLGHGF
VPRACVRTELETGILVELEVEAPRPDEPFFLAWRPDHMGEALKWWRQRLDRQLLPGILPY

Sequences:

>Translated_300_residues
MLKLSLEAIELVDAIARHGSFAGASERLHKVPSTISYAIARLEEQLGFALFTRNGPRVTLTPAGQEMIKEGRWLLAGARQ
LESRMRQIATGFESEVRLVHDSLIPTHAFNQDICAFEDLNCGTRLRIGCDVMTGTWEALREGRADIVVAAGEGPAGGGYK
AVPVGTLQFVFCVTATHPLARLQRPLTRGDLLEHTAVVVGDGARSSNERTIGLLSGQRRIVVPHMHAKIAAQAAGLGHGF
VPRACVRTELETGILVELEVEAPRPDEPFFLAWRPDHMGEALKWWRQRLDRQLLPGILPY
>Mature_300_residues
MLKLSLEAIELVDAIARHGSFAGASERLHKVPSTISYAIARLEEQLGFALFTRNGPRVTLTPAGQEMIKEGRWLLAGARQ
LESRMRQIATGFESEVRLVHDSLIPTHAFNQDICAFEDLNCGTRLRIGCDVMTGTWEALREGRADIVVAAGEGPAGGGYK
AVPVGTLQFVFCVTATHPLARLQRPLTRGDLLEHTAVVVGDGARSSNERTIGLLSGQRRIVVPHMHAKIAAQAAGLGHGF
VPRACVRTELETGILVELEVEAPRPDEPFFLAWRPDHMGEALKWWRQRLDRQLLPGILPY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=289, Percent_Identity=34.9480968858132, Blast_Score=174, Evalue=7e-45,
Organism=Escherichia coli, GI1787949, Length=278, Percent_Identity=34.1726618705036, Blast_Score=165, Evalue=4e-42,
Organism=Escherichia coli, GI1786713, Length=279, Percent_Identity=34.4086021505376, Blast_Score=161, Evalue=5e-41,
Organism=Escherichia coli, GI1789492, Length=284, Percent_Identity=34.8591549295775, Blast_Score=156, Evalue=1e-39,
Organism=Escherichia coli, GI1786508, Length=276, Percent_Identity=29.3478260869565, Blast_Score=134, Evalue=6e-33,
Organism=Escherichia coli, GI145693193, Length=260, Percent_Identity=26.5384615384615, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32946; Mature: 32946

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLSLEAIELVDAIARHGSFAGASERLHKVPSTISYAIARLEEQLGFALFTRNGPRVTL
CEEEHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHHHHCEEEEECCCCEEEE
TPAGQEMIKEGRWLLAGARQLESRMRQIATGFESEVRLVHDSLIPTHAFNQDICAFEDLN
CCCCHHHHHCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCEECCCC
CGTRLRIGCDVMTGTWEALREGRADIVVAAGEGPAGGGYKAVPVGTLQFVFCVTATHPLA
CCCEEEEEEEEECCCHHHHHCCCCCEEEECCCCCCCCCEEEEEHHHHHEEHHHHCCCHHH
RLQRPLTRGDLLEHTAVVVGDGARSSNERTIGLLSGQRRIVVPHMHAKIAAQAAGLGHGF
HHHCCCCCCHHHHCCEEEEECCCCCCCCCEEEEECCCCEEEECCHHHHHHHHHCCCCCCC
VPRACVRTELETGILVELEVEAPRPDEPFFLAWRPDHMGEALKWWRQRLDRQLLPGILPY
CCHHHHHHHCCCCEEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLKLSLEAIELVDAIARHGSFAGASERLHKVPSTISYAIARLEEQLGFALFTRNGPRVTL
CEEEHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHHHHCEEEEECCCCEEEE
TPAGQEMIKEGRWLLAGARQLESRMRQIATGFESEVRLVHDSLIPTHAFNQDICAFEDLN
CCCCHHHHHCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCEECCCC
CGTRLRIGCDVMTGTWEALREGRADIVVAAGEGPAGGGYKAVPVGTLQFVFCVTATHPLA
CCCEEEEEEEEECCCHHHHHCCCCCEEEECCCCCCCCCEEEEEHHHHHEEHHHHCCCHHH
RLQRPLTRGDLLEHTAVVVGDGARSSNERTIGLLSGQRRIVVPHMHAKIAAQAAGLGHGF
HHHCCCCCCHHHHCCEEEEECCCCCCCCCEEEEECCCCEEEECCHHHHHHHHHCCCCCCC
VPRACVRTELETGILVELEVEAPRPDEPFFLAWRPDHMGEALKWWRQRLDRQLLPGILPY
CCHHHHHHHCCCCEEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]