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The map label for this gene is yiaM [C]

Identifier: 120609446

GI number: 120609446

Start: 806234

End: 806854

Strand: Reverse

Name: yiaM [C]

Synonym: Aave_0752

Alternate gene names: 120609446

Gene position: 806854-806234 (Counterclockwise)

Preceding gene: 120609447

Following gene: 120609445

Centisome position: 15.07

GC content: 69.08

Gene sequence:

>621_bases
ATGGAACGTTGGATGGACCGCTATTGCCGGTTGCTGGATTTCCTCATGGCCGGCGCCCTGGCGGTGATGGTGGTGATGGT
GTTCGGCAACGTCGTGCTGCGCTACGCCTTCAACACCGGCATCACCGTGTCGGAGGAAGTCTCGCGCTGGCTCTTCGTCT
GGCTCACCTTCCTGGGCGCCATCGTGGCCATGCGGCACCACGGCCACCTGGGCGTGGACATGCTGGTGAGCCGCCTGCCC
GACGCGGGCAAGAAGGCCTGCGTGGTCGCCGGCCAGGGGCTGATGCTCTGGGTCTGCTGGCTGATCTTCTCGGGCAGCTG
GGCACAGACCCGGCTGAACATGGACGTCACCGCGCCCACCACCGGCTGGTCGATGGGGTACTTCTACCTGGTCGGCGTGG
TGTTCGCGGCATCGGCCGCGGTGTTCCTGCTCTACGACCTCTGGCGCGTGCTGAGCGGCCAGCTGCGCGGCGACGCGCTG
GTCATGGTCAAGGACTCGGAAGAGACCGCGGAATTCCACGCCCTGCAGGCGCGCCTGGCCGAAGAGGACCGGCTGGCCAC
CCAGGCCGGCGCCGCGCCCGGGCCGGACGCCGCGGACACGCAGCGCCAGCCCCGCGGATGA

Upstream 100 bases:

>100_bases
CTGGCGGTTCGGCCTGCGCGCCTTCATCAACCACCTGGCCGCGCGCGGCCTGCTGGACGGCCGCAGCCTCTGACGCGCAC
GCCGATCAGGAGACACAACC

Downstream 100 bases:

>100_bases
GGAGCCCCGCACCATGACCATCGCCGTCTTCCTCCTCTCGCTGCTGGGCGCCATGGCGATCGGCATCCCGATCGCGTTCT
CGCTGCTGCTCTGCGGCGTG

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MERWMDRYCRLLDFLMAGALAVMVVMVFGNVVLRYAFNTGITVSEEVSRWLFVWLTFLGAIVAMRHHGHLGVDMLVSRLP
DAGKKACVVAGQGLMLWVCWLIFSGSWAQTRLNMDVTAPTTGWSMGYFYLVGVVFAASAAVFLLYDLWRVLSGQLRGDAL
VMVKDSEETAEFHALQARLAEEDRLATQAGAAPGPDAADTQRQPRG

Sequences:

>Translated_206_residues
MERWMDRYCRLLDFLMAGALAVMVVMVFGNVVLRYAFNTGITVSEEVSRWLFVWLTFLGAIVAMRHHGHLGVDMLVSRLP
DAGKKACVVAGQGLMLWVCWLIFSGSWAQTRLNMDVTAPTTGWSMGYFYLVGVVFAASAAVFLLYDLWRVLSGQLRGDAL
VMVKDSEETAEFHALQARLAEEDRLATQAGAAPGPDAADTQRQPRG
>Mature_206_residues
MERWMDRYCRLLDFLMAGALAVMVVMVFGNVVLRYAFNTGITVSEEVSRWLFVWLTFLGAIVAMRHHGHLGVDMLVSRLP
DAGKKACVVAGQGLMLWVCWLIFSGSWAQTRLNMDVTAPTTGWSMGYFYLVGVVFAASAAVFLLYDLWRVLSGQLRGDAL
VMVKDSEETAEFHALQARLAEEDRLATQAGAAPGPDAADTQRQPRG

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter small permease family [H]

Homologues:

Organism=Escherichia coli, GI1790002, Length=151, Percent_Identity=33.112582781457, Blast_Score=85, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007387 [H]

Pfam domain/function: PF04290 DctQ [H]

EC number: NA

Molecular weight: Translated: 22810; Mature: 22810

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERWMDRYCRLLDFLMAGALAVMVVMVFGNVVLRYAFNTGITVSEEVSRWLFVWLTFLGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHH
IVAMRHHGHLGVDMLVSRLPDAGKKACVVAGQGLMLWVCWLIFSGSWAQTRLNMDVTAPT
HHHHHHCCCCCHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCHHHHEECEEECCCC
TGWSMGYFYLVGVVFAASAAVFLLYDLWRVLSGQLRGDALVMVKDSEETAEFHALQARLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHH
EEDRLATQAGAAPGPDAADTQRQPRG
HHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MERWMDRYCRLLDFLMAGALAVMVVMVFGNVVLRYAFNTGITVSEEVSRWLFVWLTFLGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHH
IVAMRHHGHLGVDMLVSRLPDAGKKACVVAGQGLMLWVCWLIFSGSWAQTRLNMDVTAPT
HHHHHHCCCCCHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCHHHHEECEEECCCC
TGWSMGYFYLVGVVFAASAAVFLLYDLWRVLSGQLRGDALVMVKDSEETAEFHALQARLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHH
EEDRLATQAGAAPGPDAADTQRQPRG
HHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]