| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120609436
Identifier: 120609436
GI number: 120609436
Start: 793471
End: 794166
Strand: Reverse
Name: 120609436
Synonym: Aave_0740
Alternate gene names: NA
Gene position: 794166-793471 (Counterclockwise)
Preceding gene: 120609437
Following gene: 120609435
Centisome position: 14.84
GC content: 71.84
Gene sequence:
>696_bases GTGGAGATCCGCCCTCCGAACGGGCCTGCCACCGATGCCAGCGCCAACCCGCCGCCCGTGCGCCTGCCACCCTCGCTGCG CCTCGCGTTCGACGTGAGCGGCGAAGTGAAGAAATTCACCTACCGTGCCGATGCCACGCTCGTCTGGCGCCACGACGATG CCGGCTACGAGGCCCGGCAGGAGATCAAGGCCTTCCTGCTCGGATCCCGGTCGCAGACCAGCAGCGGCGTGGTCACGCCC GCGGGCCTGCAGCCCAGGCGCTTCGGCGACCAGGCCAGCAGGGAGCAGGCGGCGGATTTCGACTTCGGCGCGGGCCGTGC CACCTTCAGCGGGGGCAACGCCCCGGCCGCCATCGCCGCGGGCGCGCAGGACCGGCTGAGCGTGTTCATCCAGCTCGGTG CCCTGCTGGCGGCCGCGCCCGAGCGCTACCCCGACGGCACCCGCATCACCTTCACCACCGTGGGAGCCCGTAATGCCGAC CGCTGGACCTTCACCATCGAAGGCACCGAGACGCTCGACCTGCCGATAGGCCCCACCCCGGCGCTGAAGCTGGAACGCCT GCCGCGCCGCGATGCCGACGAGAAGGCGGAACTGTGGCTGGCCCCCTCGCTGGGCTTCCTGCCCGCCCGCATCCGCCTCA CCAAGGGCAATGGAGATTACGCCGACCTGCAGCTGTCGGGCCGCGGCAGCCCCTGA
Upstream 100 bases:
>100_bases TTCCTCCGCCGCTTCCTCCGCGGCATCCGGCGCAACGGCTGCCGCGGCCCCGGCACCCGCCGCCGGCGCCAGCGATCCCG CCGACACCCGCAATGCGGGC
Downstream 100 bases:
>100_bases AGCGGGCGGGCCGCCCCTCGCGCGCGGGCAGGCGGCCACGCCAGGGCGGTGTGCGGTTTCGCCCACAGCTTCGTGGGACG GTGGCGTGACTTCGCCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MEIRPPNGPATDASANPPPVRLPPSLRLAFDVSGEVKKFTYRADATLVWRHDDAGYEARQEIKAFLLGSRSQTSSGVVTP AGLQPRRFGDQASREQAADFDFGAGRATFSGGNAPAAIAAGAQDRLSVFIQLGALLAAAPERYPDGTRITFTTVGARNAD RWTFTIEGTETLDLPIGPTPALKLERLPRRDADEKAELWLAPSLGFLPARIRLTKGNGDYADLQLSGRGSP
Sequences:
>Translated_231_residues MEIRPPNGPATDASANPPPVRLPPSLRLAFDVSGEVKKFTYRADATLVWRHDDAGYEARQEIKAFLLGSRSQTSSGVVTP AGLQPRRFGDQASREQAADFDFGAGRATFSGGNAPAAIAAGAQDRLSVFIQLGALLAAAPERYPDGTRITFTTVGARNAD RWTFTIEGTETLDLPIGPTPALKLERLPRRDADEKAELWLAPSLGFLPARIRLTKGNGDYADLQLSGRGSP >Mature_231_residues MEIRPPNGPATDASANPPPVRLPPSLRLAFDVSGEVKKFTYRADATLVWRHDDAGYEARQEIKAFLLGSRSQTSSGVVTP AGLQPRRFGDQASREQAADFDFGAGRATFSGGNAPAAIAAGAQDRLSVFIQLGALLAAAPERYPDGTRITFTTVGARNAD RWTFTIEGTETLDLPIGPTPALKLERLPRRDADEKAELWLAPSLGFLPARIRLTKGNGDYADLQLSGRGSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24773; Mature: 24773
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIRPPNGPATDASANPPPVRLPPSLRLAFDVSGEVKKFTYRADATLVWRHDDAGYEARQ CCCCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCEEEEEEECCEEEEEEECCCCHHHHH EIKAFLLGSRSQTSSGVVTPAGLQPRRFGDQASREQAADFDFGAGRATFSGGNAPAAIAA HHHHHHHCCCCCCCCCEEECCCCCCHHCCCHHHHHHHCCCCCCCCEEEECCCCCCEEEEC GAQDRLSVFIQLGALLAAAPERYPDGTRITFTTVGARNADRWTFTIEGTETLDLPIGPTP CCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEECCCEEEECCCCCCC ALKLERLPRRDADEKAELWLAPSLGFLPARIRLTKGNGDYADLQLSGRGSP CHHHHCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCCC >Mature Secondary Structure MEIRPPNGPATDASANPPPVRLPPSLRLAFDVSGEVKKFTYRADATLVWRHDDAGYEARQ CCCCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCEEEEEEECCEEEEEEECCCCHHHHH EIKAFLLGSRSQTSSGVVTPAGLQPRRFGDQASREQAADFDFGAGRATFSGGNAPAAIAA HHHHHHHCCCCCCCCCEEECCCCCCHHCCCHHHHHHHCCCCCCCCEEEECCCCCCEEEEC GAQDRLSVFIQLGALLAAAPERYPDGTRITFTTVGARNADRWTFTIEGTETLDLPIGPTP CCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEECCCEEEECCCCCCC ALKLERLPRRDADEKAELWLAPSLGFLPARIRLTKGNGDYADLQLSGRGSP CHHHHCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA