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The map label for this gene is trbB [H]

Identifier: 120609422

GI number: 120609422

Start: 780342

End: 781391

Strand: Direct

Name: trbB [H]

Synonym: Aave_0726

Alternate gene names: 120609422

Gene position: 780342-781391 (Clockwise)

Preceding gene: 120609421

Following gene: 120609423

Centisome position: 14.58

GC content: 67.14

Gene sequence:

>1050_bases
ATGAGTGCCGTTCCACAGATCCCGCCCCAACCACGCTCATCCGCTGCGGCGTCCCAGGATCGCCGAATCCAGATGCTGCG
CACGGCGATGGGCCCGGTGATCGCTGCTGCGCTGGAAGACCCGGACGTGGTGGAAGTGATGCTCAACCCCGACCGGACAT
TGTGGGTGGATCGGCTGTCCTCTGGACGTGCACCGCTCGGAGTCGAACTGCCCGAGGCCGATGGCGAACGCATCATCCGC
CTGGTAGCCGCCCATGTTGGTGCGGAGGTGCATCGCGGCCAACCGCTCTTGACCGCCGAACTGCCGGAGACCGGCGAACG
CTTCGAGGGCATCTTGCCGCCCGCCGCCCCCGGCCCGGCCTTTGCGCTGCGCAAACGCGCCGTGAGCATCATCGGTCTGG
ATCGCTATGTGGCCGATGGCATCCTGACCGCTGGGCAGGCCGAGTTTCTGCGTCATGCAGTGCGCGAGCGGCAGAACATC
CTGATTGCTGGTGGCACCAGTACCGGCAAGACCACGCTGGCGAACGCGCTGCTGGCCGAGATCGCCGCTACCGGCGACCG
CGTGTTGGTGCTCGAAGACACCATCGAGCTGCAATGCGCGGCGCGTGACCACGTGCCGCTGCGCACCCGCGCAGGCGTGG
TGTCGATGCAGGAGCTTGTGCGCGCCACGATGCGGCTGCGCCCGGATCGCGTGATCGTGGGCGAAGTGCGCGGCGGCGAA
GCGCTGGATCTGGTGAAGGTCTGGGGCACCGGCCACCCCGGTGGCATCGCCACCATCCATGCCGGTTCCGCCTTGGGCGC
ACTGCTGCGCCTCGAACAGTTGGTTCTCGAAGTAGCGGTGAATCCGCCGCGTGCGCTGATCGCCGAGGCGGTCAACGTCG
TCATCCACATCGCAGGCCGTGGCCGCAAGCGCCACGTCGAAACCATTTCTCGCGTCGTCGGTTTCGACGGCGCGGGCTAC
CGCCTGGCGGATGCGCTGAAAACGCCATTTCCCGAGCTGCCGCCGGTTCCTTCCCCGTCCCTCGACCAATCCTCTGGAGA
ACTGCCATGA

Upstream 100 bases:

>100_bases
TGGTGCGCGACGTGGTGGAAGAACTGCACCCCGACCCCATGCGCATGGATGAGGCGGCGGGGATGGCTGCCGCCCATGAA
CGCACAGCGGAGCGTGCGTC

Downstream 100 bases:

>100_bases
CGCACGTTGATGCTTTCCGTCTTTCTGTAAATCCGCTTTCTTGGCGGCCCTCGCTGGCACGGCTGCACCGCCTGGCCCGA
CCCGCAGGGCAAGGGCTGCT

Product: type II secretion system protein E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MSAVPQIPPQPRSSAAASQDRRIQMLRTAMGPVIAAALEDPDVVEVMLNPDRTLWVDRLSSGRAPLGVELPEADGERIIR
LVAAHVGAEVHRGQPLLTAELPETGERFEGILPPAAPGPAFALRKRAVSIIGLDRYVADGILTAGQAEFLRHAVRERQNI
LIAGGTSTGKTTLANALLAEIAATGDRVLVLEDTIELQCAARDHVPLRTRAGVVSMQELVRATMRLRPDRVIVGEVRGGE
ALDLVKVWGTGHPGGIATIHAGSALGALLRLEQLVLEVAVNPPRALIAEAVNVVIHIAGRGRKRHVETISRVVGFDGAGY
RLADALKTPFPELPPVPSPSLDQSSGELP

Sequences:

>Translated_349_residues
MSAVPQIPPQPRSSAAASQDRRIQMLRTAMGPVIAAALEDPDVVEVMLNPDRTLWVDRLSSGRAPLGVELPEADGERIIR
LVAAHVGAEVHRGQPLLTAELPETGERFEGILPPAAPGPAFALRKRAVSIIGLDRYVADGILTAGQAEFLRHAVRERQNI
LIAGGTSTGKTTLANALLAEIAATGDRVLVLEDTIELQCAARDHVPLRTRAGVVSMQELVRATMRLRPDRVIVGEVRGGE
ALDLVKVWGTGHPGGIATIHAGSALGALLRLEQLVLEVAVNPPRALIAEAVNVVIHIAGRGRKRHVETISRVVGFDGAGY
RLADALKTPFPELPPVPSPSLDQSSGELP
>Mature_348_residues
SAVPQIPPQPRSSAAASQDRRIQMLRTAMGPVIAAALEDPDVVEVMLNPDRTLWVDRLSSGRAPLGVELPEADGERIIRL
VAAHVGAEVHRGQPLLTAELPETGERFEGILPPAAPGPAFALRKRAVSIIGLDRYVADGILTAGQAEFLRHAVRERQNIL
IAGGTSTGKTTLANALLAEIAATGDRVLVLEDTIELQCAARDHVPLRTRAGVVSMQELVRATMRLRPDRVIVGEVRGGEA
LDLVKVWGTGHPGGIATIHAGSALGALLRLEQLVLEVAVNPPRALIAEAVNVVIHIAGRGRKRHVETISRVVGFDGAGYR
LADALKTPFPELPPVPSPSLDQSSGELP

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI1786296, Length=146, Percent_Identity=29.4520547945205, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014149
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 37058; Mature: 36927

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVPQIPPQPRSSAAASQDRRIQMLRTAMGPVIAAALEDPDVVEVMLNPDRTLWVDRLS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEHHHHC
SGRAPLGVELPEADGERIIRLVAAHVGAEVHRGQPLLTAELPETGERFEGILPPAAPGPA
CCCCCCEEECCCCCHHHHHHHHHHHHCCHHHCCCCEEEECCCCCHHHHCCCCCCCCCCHH
FALRKRAVSIIGLDRYVADGILTAGQAEFLRHAVRERQNILIAGGTSTGKTTLANALLAE
HHHHHHHHHHEEHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHH
IAATGDRVLVLEDTIELQCAARDHVPLRTRAGVVSMQELVRATMRLRPDRVIVGEVRGGE
HHCCCCEEEEEECCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCC
ALDLVKVWGTGHPGGIATIHAGSALGALLRLEQLVLEVAVNPPRALIAEAVNVVIHIAGR
EEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCC
GRKRHVETISRVVGFDGAGYRLADALKTPFPELPPVPSPSLDQSSGELP
CCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SAVPQIPPQPRSSAAASQDRRIQMLRTAMGPVIAAALEDPDVVEVMLNPDRTLWVDRLS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEHHHHC
SGRAPLGVELPEADGERIIRLVAAHVGAEVHRGQPLLTAELPETGERFEGILPPAAPGPA
CCCCCCEEECCCCCHHHHHHHHHHHHCCHHHCCCCEEEECCCCCHHHHCCCCCCCCCCHH
FALRKRAVSIIGLDRYVADGILTAGQAEFLRHAVRERQNILIAGGTSTGKTTLANALLAE
HHHHHHHHHHEEHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHH
IAATGDRVLVLEDTIELQCAARDHVPLRTRAGVVSMQELVRATMRLRPDRVIVGEVRGGE
HHCCCCEEEEEECCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCC
ALDLVKVWGTGHPGGIATIHAGSALGALLRLEQLVLEVAVNPPRALIAEAVNVVIHIAGR
EEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCC
GRKRHVETISRVVGFDGAGYRLADALKTPFPELPPVPSPSLDQSSGELP
CCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]