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The map label for this gene is ycaK [H]

Identifier: 120609409

GI number: 120609409

Start: 768815

End: 769420

Strand: Direct

Name: ycaK [H]

Synonym: Aave_0713

Alternate gene names: 120609409

Gene position: 768815-769420 (Clockwise)

Preceding gene: 120609403

Following gene: 120609410

Centisome position: 14.36

GC content: 62.54

Gene sequence:

>606_bases
ATGAAACAACTACAACTGATCTGGGCGCATCCGCGCGCCGACTCTCTGACCGCCAAGGTCGCTCAGGCGATCACCGAGGA
GCTGCAACAGCGCGGCTGGCAGGTCGCCGAGTTGGATCTGTACCGCACCGGGTTCGACCCGGTACTGCAGCCCGTCGATG
AACCCGACTGGGCTGATCCCGATAAAGCGTATTCCTCCGAGGTCATGAGGCTCGCCTCGGATCTGGCAGGCAAGGACGCG
GCGTTCATTGTGTTCCCGATCTGGTGGTTCTCGACTCCGGCCATTGTCAAAGGCTACATAGACCGCGTCTGGAACCATGG
CATCTTCTATGGCAGTGGCCGCAGACTGCCGTTCGATAGCGTGCGCTGGATCGCCCTGGCCGGCGAGTCCGAAGCCTCGT
TCACCAAGCGTGGACTGGACAAGAGCATGACCCACCTACTCAATGTGGGGATCGCGGGCTTCTGCGGTGCCAAAGACAGC
CAGGTTCATATCCTCTATGACACCCTGGGAGAGCAGGCCACGGATCTGCCTGCCCATCACGCAGCGCTGCTCGTGCAGGC
GCGTCGCATGGCGGCCGAGTGGGCCGAGGCACAGCCTGGCGCCTGA

Upstream 100 bases:

>100_bases
CTCAAAAATAGCGCCATCGCCAAATGCAGACGCTTTTTCGAACAACGGGCGGACAGCGTTGGCAGAACTTCATCAAACAG
AACAACGGAAGGATTGATTC

Downstream 100 bases:

>100_bases
CCTTTTCAATGGCGAGGCTTGTGGCCTTGCCGTGTTTCAACAAGATGGTGTTTTCTGATGATGGATTTGACAATTACCAA
GGCCGCTGTGGCCGATGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MKQLQLIWAHPRADSLTAKVAQAITEELQQRGWQVAELDLYRTGFDPVLQPVDEPDWADPDKAYSSEVMRLASDLAGKDA
AFIVFPIWWFSTPAIVKGYIDRVWNHGIFYGSGRRLPFDSVRWIALAGESEASFTKRGLDKSMTHLLNVGIAGFCGAKDS
QVHILYDTLGEQATDLPAHHAALLVQARRMAAEWAEAQPGA

Sequences:

>Translated_201_residues
MKQLQLIWAHPRADSLTAKVAQAITEELQQRGWQVAELDLYRTGFDPVLQPVDEPDWADPDKAYSSEVMRLASDLAGKDA
AFIVFPIWWFSTPAIVKGYIDRVWNHGIFYGSGRRLPFDSVRWIALAGESEASFTKRGLDKSMTHLLNVGIAGFCGAKDS
QVHILYDTLGEQATDLPAHHAALLVQARRMAAEWAEAQPGA
>Mature_201_residues
MKQLQLIWAHPRADSLTAKVAQAITEELQQRGWQVAELDLYRTGFDPVLQPVDEPDWADPDKAYSSEVMRLASDLAGKDA
AFIVFPIWWFSTPAIVKGYIDRVWNHGIFYGSGRRLPFDSVRWIALAGESEASFTKRGLDKSMTHLLNVGIAGFCGAKDS
QVHILYDTLGEQATDLPAHHAALLVQARRMAAEWAEAQPGA

Specific function: Unknown

COG id: COG2249

COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD(P)H dehydrogenase (quinone) family [H]

Homologues:

Organism=Escherichia coli, GI1787129, Length=191, Percent_Identity=46.5968586387435, Blast_Score=187, Evalue=5e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003680 [H]

Pfam domain/function: PF02525 Flavodoxin_2 [H]

EC number: 1.6.99.- [C]

Molecular weight: Translated: 22349; Mature: 22349

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLQLIWAHPRADSLTAKVAQAITEELQQRGWQVAELDLYRTGFDPVLQPVDEPDWADP
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCHHHCCCCCCCCCCC
DKAYSSEVMRLASDLAGKDAAFIVFPIWWFSTPAIVKGYIDRVWNHGIFYGSGRRLPFDS
HHHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCHHHHHHHHHHHHCCCEEECCCCCCCCCC
VRWIALAGESEASFTKRGLDKSMTHLLNVGIAGFCGAKDSQVHILYDTLGEQATDLPAHH
EEEEEEECCCCHHHHHHCHHHHHHHHHHHCHHHCCCCCCCEEEEEHHHHCCHHHCCCHHH
AALLVQARRMAAEWAEAQPGA
HHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKQLQLIWAHPRADSLTAKVAQAITEELQQRGWQVAELDLYRTGFDPVLQPVDEPDWADP
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCHHHCCCCCCCCCCC
DKAYSSEVMRLASDLAGKDAAFIVFPIWWFSTPAIVKGYIDRVWNHGIFYGSGRRLPFDS
HHHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCHHHHHHHHHHHHCCCEEECCCCCCCCCC
VRWIALAGESEASFTKRGLDKSMTHLLNVGIAGFCGAKDSQVHILYDTLGEQATDLPAHH
EEEEEEECCCCHHHHHHCHHHHHHHHHHHCHHHCCCCCCCEEEEEHHHHCCHHHCCCHHH
AALLVQARRMAAEWAEAQPGA
HHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 3053170; 7567469 [H]