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The map label for this gene is intZ [H]

Identifier: 120609369

GI number: 120609369

Start: 730850

End: 732055

Strand: Direct

Name: intZ [H]

Synonym: Aave_0671

Alternate gene names: 120609369

Gene position: 730850-732055 (Clockwise)

Preceding gene: 120609368

Following gene: 120609370

Centisome position: 13.65

GC content: 62.85

Gene sequence:

>1206_bases
ATGGCGAAAATCAAGCTCACCAAGTCCGCAGTCGATGCGGCGCAACCCCAGGCGCGGGCTGTCGAACTCCGGGATACGCT
GGTGCCCGGCTTCCTGTGCAAGATTACACCAGCGGGCCGCAAGGTGTTCATGCTCCAGTACCGTACAAACGCGGGCGAGC
GCCGCAAGCCCGCCTTGGGCCTTTACGGGGAATTGACCGTTGAGCAGGCGCGCTCGCTGGCGCAGGAATGGCTGGCGCAG
GTACGCCGGGGCGGCGATCCCAGCGCCGATAAGGCAATGGCCCGATCCGCCCCTACGGTTGCGGAACTGTGCAAGAAGTT
CATGGAGGATCACTCCAAGCAGCGCAACAAGCCCAGCACCCAGCGCGGGTATCAGGCAGTCATCGACCGTTGCATCGTCC
CGATGCTTGGCCGCATGAAGGTGCAGGACGTGAAGCGGCCCGACGTGGCGTCGACCATGAAGAAGATGGTTCACAAACCG
GCCGAGGCGAACCGCGCCTTCAGCGTTATGCGCAAGATGTTCAACCTGGCTGAGGTGTGGGGCTATCGACCTGACGGCAC
GAACCCGTGCCGCCATGTTCCGATGTACCCCAACGGCAAGGCCACTCACCTCATCAGCGATGAGGAGATGGGCAAACTGT
TCCGGTATCTCGACTTTCTGGAAACCGATGGCTTAGGACTAGATCACGCCATCCTGCCGTTGGCGATCCGGCTGCAATTC
GAGTTTGCGGGCCGCCGCTCCGAAATCGTCACGCTGCAATGGGATTGGGTGGATCTGGAGAACCGGCGTGTGGTCTGGCC
TGACAGCAAGACCGGCGGAATGTCCAAGCCCTTGAGCGAGGAAGCCCATCGGCTGCTGTCCACCGCGTCCCGCCAGGACG
GTTGCCCGCACGTGTTCCCGTCCCCGAACCATCCCGGGAAGCCCATGACCACCGGCGAGTATTACAGCGGCTGGACACGC
ATCCTCAAGCGCGCCGGCGTGACCCATGTGGGCACGCACGGCATCCGGCACCGTTCAGCCACCGACATTGCCAATTCAGG
CATCCCGGTCAAGGTCGGCATGGCGCTGACCGCGCACAAGACCGTCGCAATGTTCATGCGCTACGTCCATACCGAAGACA
AGCCAGTGCGGGAGGCAGCGGAACTGGTGGCGAATCGGCGCAAAACGATCACAGGCGCATCACGCGCCACGGAGGCGATG
GCATGA

Upstream 100 bases:

>100_bases
CGAGTCCAACATATGCCGGTGCTTTCCGAAACCTGACCTGACTTCCCTGCTGGTGGCCCCTATGAGGCTCTTGGGAATCG
GGTCATTCCGAGGAGTCATC

Downstream 100 bases:

>100_bases
CCAAAAGCCCGCTTCAAGCGGCGGGTGAATCCCCCGCCGCTTTGCCTGCCGGCTATGCCAGCATTCACGGCGGCATCGTG
GACGTGCTTGATGCTGCCCG

Product: phage integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MAKIKLTKSAVDAAQPQARAVELRDTLVPGFLCKITPAGRKVFMLQYRTNAGERRKPALGLYGELTVEQARSLAQEWLAQ
VRRGGDPSADKAMARSAPTVAELCKKFMEDHSKQRNKPSTQRGYQAVIDRCIVPMLGRMKVQDVKRPDVASTMKKMVHKP
AEANRAFSVMRKMFNLAEVWGYRPDGTNPCRHVPMYPNGKATHLISDEEMGKLFRYLDFLETDGLGLDHAILPLAIRLQF
EFAGRRSEIVTLQWDWVDLENRRVVWPDSKTGGMSKPLSEEAHRLLSTASRQDGCPHVFPSPNHPGKPMTTGEYYSGWTR
ILKRAGVTHVGTHGIRHRSATDIANSGIPVKVGMALTAHKTVAMFMRYVHTEDKPVREAAELVANRRKTITGASRATEAM
A

Sequences:

>Translated_401_residues
MAKIKLTKSAVDAAQPQARAVELRDTLVPGFLCKITPAGRKVFMLQYRTNAGERRKPALGLYGELTVEQARSLAQEWLAQ
VRRGGDPSADKAMARSAPTVAELCKKFMEDHSKQRNKPSTQRGYQAVIDRCIVPMLGRMKVQDVKRPDVASTMKKMVHKP
AEANRAFSVMRKMFNLAEVWGYRPDGTNPCRHVPMYPNGKATHLISDEEMGKLFRYLDFLETDGLGLDHAILPLAIRLQF
EFAGRRSEIVTLQWDWVDLENRRVVWPDSKTGGMSKPLSEEAHRLLSTASRQDGCPHVFPSPNHPGKPMTTGEYYSGWTR
ILKRAGVTHVGTHGIRHRSATDIANSGIPVKVGMALTAHKTVAMFMRYVHTEDKPVREAAELVANRRKTITGASRATEAM
A
>Mature_400_residues
AKIKLTKSAVDAAQPQARAVELRDTLVPGFLCKITPAGRKVFMLQYRTNAGERRKPALGLYGELTVEQARSLAQEWLAQV
RRGGDPSADKAMARSAPTVAELCKKFMEDHSKQRNKPSTQRGYQAVIDRCIVPMLGRMKVQDVKRPDVASTMKKMVHKPA
EANRAFSVMRKMFNLAEVWGYRPDGTNPCRHVPMYPNGKATHLISDEEMGKLFRYLDFLETDGLGLDHAILPLAIRLQFE
FAGRRSEIVTLQWDWVDLENRRVVWPDSKTGGMSKPLSEEAHRLLSTASRQDGCPHVFPSPNHPGKPMTTGEYYSGWTRI
LKRAGVTHVGTHGIRHRSATDIANSGIPVKVGMALTAHKTVAMFMRYVHTEDKPVREAAELVANRRKTITGASRATEAMA

Specific function: Integrase is necessary for integration of the phage into the host genome by site-specific recombination. In conjunction with excisionase, integrase is also necessary for excision of the prophage from the host genome [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI145693166, Length=358, Percent_Identity=26.536312849162, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788690, Length=353, Percent_Identity=23.2294617563739, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 44825; Mature: 44694

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKIKLTKSAVDAAQPQARAVELRDTLVPGFLCKITPAGRKVFMLQYRTNAGERRKPALG
CCEEEECHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCC
LYGELTVEQARSLAQEWLAQVRRGGDPSADKAMARSAPTVAELCKKFMEDHSKQRNKPST
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCH
QRGYQAVIDRCIVPMLGRMKVQDVKRPDVASTMKKMVHKPAEANRAFSVMRKMFNLAEVW
HHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
GYRPDGTNPCRHVPMYPNGKATHLISDEEMGKLFRYLDFLETDGLGLDHAILPLAIRLQF
CCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEEEEE
EFAGRRSEIVTLQWDWVDLENRRVVWPDSKTGGMSKPLSEEAHRLLSTASRQDGCPHVFP
EECCCCCEEEEEEEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
SPNHPGKPMTTGEYYSGWTRILKRAGVTHVGTHGIRHRSATDIANSGIPVKVGMALTAHK
CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHCCCCCEEECCHHHHHH
TVAMFMRYVHTEDKPVREAAELVANRRKTITGASRATEAMA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCC
>Mature Secondary Structure 
AKIKLTKSAVDAAQPQARAVELRDTLVPGFLCKITPAGRKVFMLQYRTNAGERRKPALG
CEEEECHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCC
LYGELTVEQARSLAQEWLAQVRRGGDPSADKAMARSAPTVAELCKKFMEDHSKQRNKPST
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCH
QRGYQAVIDRCIVPMLGRMKVQDVKRPDVASTMKKMVHKPAEANRAFSVMRKMFNLAEVW
HHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
GYRPDGTNPCRHVPMYPNGKATHLISDEEMGKLFRYLDFLETDGLGLDHAILPLAIRLQF
CCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEEEEE
EFAGRRSEIVTLQWDWVDLENRRVVWPDSKTGGMSKPLSEEAHRLLSTASRQDGCPHVFP
EECCCCCEEEEEEEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
SPNHPGKPMTTGEYYSGWTRILKRAGVTHVGTHGIRHRSATDIANSGIPVKVGMALTAHK
CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHCCCCCEEECCHHHHHH
TVAMFMRYVHTEDKPVREAAELVANRRKTITGASRATEAMA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]