| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609254
Identifier: 120609254
GI number: 120609254
Start: 597246
End: 597638
Strand: Reverse
Name: 120609254
Synonym: Aave_0553
Alternate gene names: NA
Gene position: 597638-597246 (Counterclockwise)
Preceding gene: 120609255
Following gene: 120609253
Centisome position: 11.17
GC content: 61.07
Gene sequence:
>393_bases ATGAACCTGAATCTTCCCCCGGAAGTCGCCGATCTGTTCGTACGCGAACAGATCCATTTCGCTGCTGCACCTGAAGCGTT TTTCCAAGCCTGGAAGCGTGGTGCCGAGATTGCCGGTCCGGAGTGGTTCGGCGACGGCACGATGGAAGGGATGCGCAAGG CCACAAGCAAGTGGGACCTGCGGCCCAACCTGCTTGCCATCGGTGAAGCGCTGCACGTGCTGAGCAGCGGCCAGCGGATG TTTCTCGCCGCGATGGTGAGCTTCTACAACGCTCGTGAAGGTGCAGCCATGCTGCGCCAATGCCGGTTCGAGGGCCTCGC CGACTTCGGCGGACTCGATCTGCAAAGCAGACAGGTCATCGCCGACCTGCTGCTGAACTACGTGGGCTGGTAA
Upstream 100 bases:
>100_bases TCGATCGAGTACTTCCGCAGCGAAAAAGCTGCCCAACGCGCGCTGGAGCGCGGCGGATGGTCCCAGTTGCCCAACCCCTG ATCCCGCGAAGGATTTCATG
Downstream 100 bases:
>100_bases GCCCGCGCCGGCAAGGGCCCTGGCCACGAGGAACCTCCGCGGCTCGCCGCGCGCTCCTCGCTTTCATCACCGGGCGCCCT CTGCGCCCGTTTTTCTATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MNLNLPPEVADLFVREQIHFAAAPEAFFQAWKRGAEIAGPEWFGDGTMEGMRKATSKWDLRPNLLAIGEALHVLSSGQRM FLAAMVSFYNAREGAAMLRQCRFEGLADFGGLDLQSRQVIADLLLNYVGW
Sequences:
>Translated_130_residues MNLNLPPEVADLFVREQIHFAAAPEAFFQAWKRGAEIAGPEWFGDGTMEGMRKATSKWDLRPNLLAIGEALHVLSSGQRM FLAAMVSFYNAREGAAMLRQCRFEGLADFGGLDLQSRQVIADLLLNYVGW >Mature_130_residues MNLNLPPEVADLFVREQIHFAAAPEAFFQAWKRGAEIAGPEWFGDGTMEGMRKATSKWDLRPNLLAIGEALHVLSSGQRM FLAAMVSFYNAREGAAMLRQCRFEGLADFGGLDLQSRQVIADLLLNYVGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14506; Mature: 14506
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLNLPPEVADLFVREQIHFAAAPEAFFQAWKRGAEIAGPEWFGDGTMEGMRKATSKWDL CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCC RPNLLAIGEALHVLSSGQRMFLAAMVSFYNAREGAAMLRQCRFEGLADFGGLDLQSRQVI CCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH ADLLLNYVGW HHHHHHHHCC >Mature Secondary Structure MNLNLPPEVADLFVREQIHFAAAPEAFFQAWKRGAEIAGPEWFGDGTMEGMRKATSKWDL CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCC RPNLLAIGEALHVLSSGQRMFLAAMVSFYNAREGAAMLRQCRFEGLADFGGLDLQSRQVI CCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH ADLLLNYVGW HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA