| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609248
Identifier: 120609248
GI number: 120609248
Start: 592133
End: 593056
Strand: Reverse
Name: 120609248
Synonym: Aave_0547
Alternate gene names: NA
Gene position: 593056-592133 (Counterclockwise)
Preceding gene: 120609249
Following gene: 120609247
Centisome position: 11.08
GC content: 66.23
Gene sequence:
>924_bases ATGACTACCTCGTCGTCATCCAACGCGAAGTCCTACTTCGATCTCCACACCTCGGGCATCGGGTACCTAAAGAACGTCCG AGAGGTTCCGGTTCGCGGCGGCCGCCGCGCGCAGCCCTTCCTGGCTTGCAAGATCGACGCGCTGGTCGGTCCCGCAAAGG ACCCGAGCTATCGCACCTTCGATCTGAAGGTCTCCGGCGCCAAGGCCAAGGAACTGGTCGAAAGCTACATGGGCGTGGAC GACCGCCGGAAGCGGCCGCTGGTCCGCTTCCGCATCGGCGACCTGTGGGCCGATTCCTTCATCCGCGACAAAGGTGATCG GAAGGGCGAAGCGGCTGCGCAACTCAAGGGCCGTCTGCTGAAGGCCGAGCTGGTCGATCGCGGCGAGTTCATGCGCATCC AGACGCATGAGCTCATCACCCGCGGCATCGGCTATCTCAATCGCCCGGAGGACGTCCGTCCGAAGGACGGCGACCCGTTC CTCGCCTGCTGCATCGCGGCGCTGGCGGGGCCCACCGACGAGCCGGAGTACCGGTACATCGAGGCGAAGGTGAAGACGGA ATCCGCCGCCCACCTGGTGCGGCGTTGCGTGCAGGCTGTGGAGGCCGAGCGCAAGGTGCTCATCTCGTTCCTCCTGAACG ACATGAAGATCGATGCGTACCTCCGCACCAAGGGGGAACGCGCCGGTGAAGCCGCCGCATCCCTGGAGGCCAATCTGGTC CACATCGGGCTCATCAAGATCGACGGCCAGAAGGTCTATCCGCTCGCCGCGCCGGCTCCCGACGCGCCGCCGGCCGAGGA TGCCTCCACGTCCGAAGCCGATAGCGCCTCCGACTCCACATCCGTCCATGCCCCCGAGCCCGCCGAGCGCGAGCCCGTGA GCGAGGAGCAGGAACGCGAGCCGGAACCGGTCGAGTCGTTCTGA
Upstream 100 bases:
>100_bases GGTGGCGATGCATCCGCCTGTTCAACCCACCGCGGGGTTACGCACCTCTCCCCGCACGATGGGGTCGGTGTGTCTCCGCT TCATCCTATGGAGCACCACC
Downstream 100 bases:
>100_bases AACCGGCAGGGCCCCGCTCGGGGCCCCGCCCATCTTCTCCCGAGCGATCGCAAGGAAATCATCATGGACACCACCACACC CGGCGAGCGGCCAATGCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MTTSSSSNAKSYFDLHTSGIGYLKNVREVPVRGGRRAQPFLACKIDALVGPAKDPSYRTFDLKVSGAKAKELVESYMGVD DRRKRPLVRFRIGDLWADSFIRDKGDRKGEAAAQLKGRLLKAELVDRGEFMRIQTHELITRGIGYLNRPEDVRPKDGDPF LACCIAALAGPTDEPEYRYIEAKVKTESAAHLVRRCVQAVEAERKVLISFLLNDMKIDAYLRTKGERAGEAAASLEANLV HIGLIKIDGQKVYPLAAPAPDAPPAEDASTSEADSASDSTSVHAPEPAEREPVSEEQEREPEPVESF
Sequences:
>Translated_307_residues MTTSSSSNAKSYFDLHTSGIGYLKNVREVPVRGGRRAQPFLACKIDALVGPAKDPSYRTFDLKVSGAKAKELVESYMGVD DRRKRPLVRFRIGDLWADSFIRDKGDRKGEAAAQLKGRLLKAELVDRGEFMRIQTHELITRGIGYLNRPEDVRPKDGDPF LACCIAALAGPTDEPEYRYIEAKVKTESAAHLVRRCVQAVEAERKVLISFLLNDMKIDAYLRTKGERAGEAAASLEANLV HIGLIKIDGQKVYPLAAPAPDAPPAEDASTSEADSASDSTSVHAPEPAEREPVSEEQEREPEPVESF >Mature_306_residues TTSSSSNAKSYFDLHTSGIGYLKNVREVPVRGGRRAQPFLACKIDALVGPAKDPSYRTFDLKVSGAKAKELVESYMGVDD RRKRPLVRFRIGDLWADSFIRDKGDRKGEAAAQLKGRLLKAELVDRGEFMRIQTHELITRGIGYLNRPEDVRPKDGDPFL ACCIAALAGPTDEPEYRYIEAKVKTESAAHLVRRCVQAVEAERKVLISFLLNDMKIDAYLRTKGERAGEAAASLEANLVH IGLIKIDGQKVYPLAAPAPDAPPAEDASTSEADSASDSTSVHAPEPAEREPVSEEQEREPEPVESF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33781; Mature: 33650
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSSSSNAKSYFDLHTSGIGYLKNVREVPVRGGRRAQPFLACKIDALVGPAKDPSYRTF CCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCEEEEEEHHHCCCCCCCCEEEE DLKVSGAKAKELVESYMGVDDRRKRPLVRFRIGDLWADSFIRDKGDRKGEAAAQLKGRLL EEEECCHHHHHHHHHHCCCCCHHCCCEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHH KAELVDRGEFMRIQTHELITRGIGYLNRPEDVRPKDGDPFLACCIAALAGPTDEPEYRYI HHHHHCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEE EAKVKTESAAHLVRRCVQAVEAERKVLISFLLNDMKIDAYLRTKGERAGEAAASLEANLV EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHCCCEE HIGLIKIDGQKVYPLAAPAPDAPPAEDASTSEADSASDSTSVHAPEPAEREPVSEEQERE EEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC PEPVESF CCCCCCC >Mature Secondary Structure TTSSSSNAKSYFDLHTSGIGYLKNVREVPVRGGRRAQPFLACKIDALVGPAKDPSYRTF CCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCEEEEEEHHHCCCCCCCCEEEE DLKVSGAKAKELVESYMGVDDRRKRPLVRFRIGDLWADSFIRDKGDRKGEAAAQLKGRLL EEEECCHHHHHHHHHHCCCCCHHCCCEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHH KAELVDRGEFMRIQTHELITRGIGYLNRPEDVRPKDGDPFLACCIAALAGPTDEPEYRYI HHHHHCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEE EAKVKTESAAHLVRRCVQAVEAERKVLISFLLNDMKIDAYLRTKGERAGEAAASLEANLV EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHCCCEE HIGLIKIDGQKVYPLAAPAPDAPPAEDASTSEADSASDSTSVHAPEPAEREPVSEEQERE EEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC PEPVESF CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA