| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609242
Identifier: 120609242
GI number: 120609242
Start: 588295
End: 588603
Strand: Reverse
Name: 120609242
Synonym: Aave_0541
Alternate gene names: NA
Gene position: 588603-588295 (Counterclockwise)
Preceding gene: 120609243
Following gene: 120609241
Centisome position: 11.0
GC content: 66.02
Gene sequence:
>309_bases ATGTTCCAGCGGCGCAAGCCGCTTCCGCAACCGCTGTTCGCGCTGGGCACGATCCAGCTGAGCGACAAGGTGTGTTGGCT CGCGAGCAAGGGCCTCATCGATCCCCTGCCCTACGTGCAACGCCACATACGCGGTGACTGGGGCCAAGTCAGCGAGGCCG AGCGTCAGGCCAACGGCACAGCTCTGGAGCGCGGCACGCCGATGACATCGCGGTTTCCCATCAACCCCCGGCTGTCGCTG GTCGTCGTCACCAGCAAAGACCAGGGCACGACCGTCGTGCAACTGCCCGAGGAACGGGCGGTGACCTGA
Upstream 100 bases:
>100_bases GGACATGACCCCGGGCTCTCCCACGCTGGGCGAAGTCCTCACCATTCGCTGATCCCGGCGTATCCATCCACCACAGCAAG GAGAAGCACCATGTTTTCCA
Downstream 100 bases:
>100_bases CCCACGCGCCTGTTCCGCAGGCCGCGAGCGCCTGCAGCTTCTGATCCCCTCGGCCGCGAGCCGAGTCTTCTTCCCACCCC GGGGCATGCCATCGCCCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MFQRRKPLPQPLFALGTIQLSDKVCWLASKGLIDPLPYVQRHIRGDWGQVSEAERQANGTALERGTPMTSRFPINPRLSL VVVTSKDQGTTVVQLPEERAVT
Sequences:
>Translated_102_residues MFQRRKPLPQPLFALGTIQLSDKVCWLASKGLIDPLPYVQRHIRGDWGQVSEAERQANGTALERGTPMTSRFPINPRLSL VVVTSKDQGTTVVQLPEERAVT >Mature_102_residues MFQRRKPLPQPLFALGTIQLSDKVCWLASKGLIDPLPYVQRHIRGDWGQVSEAERQANGTALERGTPMTSRFPINPRLSL VVVTSKDQGTTVVQLPEERAVT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11396; Mature: 11396
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQRRKPLPQPLFALGTIQLSDKVCWLASKGLIDPLPYVQRHIRGDWGQVSEAERQANGT CCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHHCCCC ALERGTPMTSRFPINPRLSLVVVTSKDQGTTVVQLPEERAVT EECCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCC >Mature Secondary Structure MFQRRKPLPQPLFALGTIQLSDKVCWLASKGLIDPLPYVQRHIRGDWGQVSEAERQANGT CCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHHCCCC ALERGTPMTSRFPINPRLSLVVVTSKDQGTTVVQLPEERAVT EECCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA