| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609228
Identifier: 120609228
GI number: 120609228
Start: 570589
End: 572781
Strand: Reverse
Name: 120609228
Synonym: Aave_0527
Alternate gene names: NA
Gene position: 572781-570589 (Counterclockwise)
Preceding gene: 120609229
Following gene: 120609227
Centisome position: 10.7
GC content: 68.76
Gene sequence:
>2193_bases ATGGCCCAGGCGCATGCAGTCGAGGTGCTGCTGCGCCCCGCGGTGGAGCTATACACCGTTGCGGTTTGCGCCGGCGCCGC GCTGGCGTGCGTGGTGGCACCGTGGTCGCTCGCGCTGAGCCCCACTCTGGGGTTTGCCAGCGCCCTCGGTTTCGCGGCCT TCGGCGGCATCCGCCTGCAGCAGGCCCACGCCATCCTGCGCTACCGACGCAACATCCGCCGCCTGCCGCGCTACGTGATG ACCAGCCGCGACGTCCCGGTCAGCCAGCAGCGCCTGTTCCTCGGCCGCGGCTTTCGCTGGGACCAGCGCCACACGCACCG GCTGATGCAGACCTACCGGCCCGAGTTCCGCCGCTACGTCGAGCCGACCGCGCTCTACCGGCTCGCGCGGCGGTGCGAGG AGCGCCTGGAGTTCGCGCCGCCACCGTTCGCGCGCCTGGCGCGCTGGACGGCGTGGGACCATCCGATGAACCCCGTGCGG CCCCTGCCGCCGGTCGGCGGGCTGCCGCGCCTGCACGGCATCGAGCCGCAGGAGGTGGATGTCACCCTGCCGCTGGGGGA GCGGGTCGGGCATACCCTGGTGCTGGGCACCACGCGCGTCGGCAAGACGCGCCTGGCCGAACTGTTCATCACGCAGGACA TCCGCCGCCGCGCGGCCGACGGTGGGTACGAAGTGGTGATCGTCTTCGACCCCAAGGGCGACGCGGACCTGCTCAAGCGC ATGTACGTGGAGGCGCGCCGCGCCGGACGCGAAGGCGAGTTCTATGTGTTCCACCTGGGCTGGCCCGACCTGAGCGCGCG CTACAACGCGGTGGGGCGCTTCGGCCGCATCTCGGAAGTCGCCACGCGCATCGCGGGGCAGTTGTCCGGCGAGGGCAACA GCGCGGCCTTCCGCGAATTCGCGTGGCGGTTCGTCAACATCATCGCGCGGGCACTCGTGGAACTGGGTCAGCGCCCGGAC TACCTGCTGATCCAGCGCCACGTCATCAACATCGATGCGCTGTTCATGGAGTACGCCGCGCACTTCTTCGCGCGCACGCA GCCCAAGGCCTGGGAGATCATCGTCCAGCTCGAAGCGCGCCTCAACGACAAGAACATCCCGCGCAACATGATCGGGCGCG AGAAGCGTGTGATCGCAATCGAGCAGTACCTCGCGCAGGTGCGCGTGTACGACCCCGTTCTCGACGGGCTGCGCAGCGCG GTGCGCTACGACCGGACCTACTTCGACAAGATCGTCGCCAGCCTGCTGCCGCTGCTGGAGAAGCTCACCACGGGCAAGAT CGCCCAACTGCTGGCACCCAACTATTCGGACCTGGCCGACCCACGGCCCATCTTCGACTGGATGCAGGTCATCCGAAAGC GCGCGATCGTGTATGTAGGCCTGGACGCGCTCTCGGATGCGGAAGTGGCGGCCGCCGTGGGCAATTCCATGTTCTCGGAC CTGGTGTCGGTCGCCGGCCACATCTACAAGTTCGGCGTGGACGACGGGCTGCCCGGCGCCGACGCCAGCAGCAAGGTGCC GATCAACGTCCACGCCGACGAGTTCAACGAGCTGATGGGCGACGAGTTCATTCCCATGGTCAACAAGGGCGGCGGTGCCG GTGTGCAGGTCACGGCGTACACGCAGACGCTCTCCGACATCGAGGCGCGCATCGGCAACCGCGCCAAGGCCGGCCAGGTG GTGGGCAACTTCAACAACTTGGTCATGCTGCGCGTCAGGGAGACGGCCACGGCCGAACTGCTCACCCGCCAGTTGCCCAA GGTCGAGGTCTTCGCCACCTCCGTGACCAGCGGTGCCACCGACAGTTCCGATCCCACGGGCAACACCGCATTCACCTCCA ATACTCAGGACCGCGTCGCCAGCACCAGCGTACCGCTTATCGAGCCCGCGCACGTCGTCGCCCTGCCCAAGGGCCAGGCC TTCGCGCTGCTCGAAGGGGGCAACCTGTGGAAGGTGCGCATGCCACTGCCCGCACCCGACCCCGACGAGGCCATGCCGCG CGACCTGCAGGAGCTGGCCGCCGGCATGCGACTGCACTACGTCATGGACGCTGGAAGCTGGTGGGACGGCCAGGGCGCCG CAGGACCTCGGGATGACGGATTGCCCGACGACCTGCTGCAGGGCGCGTTCGCCACTACCGAGGCAGACGACCCCGCCGAC CAGGGCGGGATGGATGGGGCCGGCATGCCATGA
Upstream 100 bases:
>100_bases GGTCTGGTGCTCTCGCCGGCCTCGGGGGACGATCTGGCCCGCAGGCTGGGGCTTCGCCACTACCCGGCCCTGTTGACCGC CACGGGCATCGAGCAGTGAC
Downstream 100 bases:
>100_bases GCGATGTCGCCGCCACCGCCCAGCGCCAGCAGGTACGCCAGCAGGGCTTCATCGTCGCCCTCATTACGCTGCCGTTCCGC TGCTTCGGCGTGCTGTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 730; Mature: 729
Protein sequence:
>730_residues MAQAHAVEVLLRPAVELYTVAVCAGAALACVVAPWSLALSPTLGFASALGFAAFGGIRLQQAHAILRYRRNIRRLPRYVM TSRDVPVSQQRLFLGRGFRWDQRHTHRLMQTYRPEFRRYVEPTALYRLARRCEERLEFAPPPFARLARWTAWDHPMNPVR PLPPVGGLPRLHGIEPQEVDVTLPLGERVGHTLVLGTTRVGKTRLAELFITQDIRRRAADGGYEVVIVFDPKGDADLLKR MYVEARRAGREGEFYVFHLGWPDLSARYNAVGRFGRISEVATRIAGQLSGEGNSAAFREFAWRFVNIIARALVELGQRPD YLLIQRHVINIDALFMEYAAHFFARTQPKAWEIIVQLEARLNDKNIPRNMIGREKRVIAIEQYLAQVRVYDPVLDGLRSA VRYDRTYFDKIVASLLPLLEKLTTGKIAQLLAPNYSDLADPRPIFDWMQVIRKRAIVYVGLDALSDAEVAAAVGNSMFSD LVSVAGHIYKFGVDDGLPGADASSKVPINVHADEFNELMGDEFIPMVNKGGGAGVQVTAYTQTLSDIEARIGNRAKAGQV VGNFNNLVMLRVRETATAELLTRQLPKVEVFATSVTSGATDSSDPTGNTAFTSNTQDRVASTSVPLIEPAHVVALPKGQA FALLEGGNLWKVRMPLPAPDPDEAMPRDLQELAAGMRLHYVMDAGSWWDGQGAAGPRDDGLPDDLLQGAFATTEADDPAD QGGMDGAGMP
Sequences:
>Translated_730_residues MAQAHAVEVLLRPAVELYTVAVCAGAALACVVAPWSLALSPTLGFASALGFAAFGGIRLQQAHAILRYRRNIRRLPRYVM TSRDVPVSQQRLFLGRGFRWDQRHTHRLMQTYRPEFRRYVEPTALYRLARRCEERLEFAPPPFARLARWTAWDHPMNPVR PLPPVGGLPRLHGIEPQEVDVTLPLGERVGHTLVLGTTRVGKTRLAELFITQDIRRRAADGGYEVVIVFDPKGDADLLKR MYVEARRAGREGEFYVFHLGWPDLSARYNAVGRFGRISEVATRIAGQLSGEGNSAAFREFAWRFVNIIARALVELGQRPD YLLIQRHVINIDALFMEYAAHFFARTQPKAWEIIVQLEARLNDKNIPRNMIGREKRVIAIEQYLAQVRVYDPVLDGLRSA VRYDRTYFDKIVASLLPLLEKLTTGKIAQLLAPNYSDLADPRPIFDWMQVIRKRAIVYVGLDALSDAEVAAAVGNSMFSD LVSVAGHIYKFGVDDGLPGADASSKVPINVHADEFNELMGDEFIPMVNKGGGAGVQVTAYTQTLSDIEARIGNRAKAGQV VGNFNNLVMLRVRETATAELLTRQLPKVEVFATSVTSGATDSSDPTGNTAFTSNTQDRVASTSVPLIEPAHVVALPKGQA FALLEGGNLWKVRMPLPAPDPDEAMPRDLQELAAGMRLHYVMDAGSWWDGQGAAGPRDDGLPDDLLQGAFATTEADDPAD QGGMDGAGMP >Mature_729_residues AQAHAVEVLLRPAVELYTVAVCAGAALACVVAPWSLALSPTLGFASALGFAAFGGIRLQQAHAILRYRRNIRRLPRYVMT SRDVPVSQQRLFLGRGFRWDQRHTHRLMQTYRPEFRRYVEPTALYRLARRCEERLEFAPPPFARLARWTAWDHPMNPVRP LPPVGGLPRLHGIEPQEVDVTLPLGERVGHTLVLGTTRVGKTRLAELFITQDIRRRAADGGYEVVIVFDPKGDADLLKRM YVEARRAGREGEFYVFHLGWPDLSARYNAVGRFGRISEVATRIAGQLSGEGNSAAFREFAWRFVNIIARALVELGQRPDY LLIQRHVINIDALFMEYAAHFFARTQPKAWEIIVQLEARLNDKNIPRNMIGREKRVIAIEQYLAQVRVYDPVLDGLRSAV RYDRTYFDKIVASLLPLLEKLTTGKIAQLLAPNYSDLADPRPIFDWMQVIRKRAIVYVGLDALSDAEVAAAVGNSMFSDL VSVAGHIYKFGVDDGLPGADASSKVPINVHADEFNELMGDEFIPMVNKGGGAGVQVTAYTQTLSDIEARIGNRAKAGQVV GNFNNLVMLRVRETATAELLTRQLPKVEVFATSVTSGATDSSDPTGNTAFTSNTQDRVASTSVPLIEPAHVVALPKGQAF ALLEGGNLWKVRMPLPAPDPDEAMPRDLQELAAGMRLHYVMDAGSWWDGQGAAGPRDDGLPDDLLQGAFATTEADDPADQ GGMDGAGMP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80652; Mature: 80521
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQAHAVEVLLRPAVELYTVAVCAGAALACVVAPWSLALSPTLGFASALGFAAFGGIRLQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHH QAHAILRYRRNIRRLPRYVMTSRDVPVSQQRLFLGRGFRWDQRHTHRLMQTYRPEFRRYV HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHC EPTALYRLARRCEERLEFAPPPFARLARWTAWDHPMNPVRPLPPVGGLPRLHGIEPQEVD CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE VTLPLGERVGHTLVLGTTRVGKTRLAELFITQDIRRRAADGGYEVVIVFDPKGDADLLKR EEECCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHH MYVEARRAGREGEFYVFHLGWPDLSARYNAVGRFGRISEVATRIAGQLSGEGNSAAFREF HHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHH AWRFVNIIARALVELGQRPDYLLIQRHVINIDALFMEYAAHFFARTQPKAWEIIVQLEAR HHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHH LNDKNIPRNMIGREKRVIAIEQYLAQVRVYDPVLDGLRSAVRYDRTYFDKIVASLLPLLE CCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLTTGKIAQLLAPNYSDLADPRPIFDWMQVIRKRAIVYVGLDALSDAEVAAAVGNSMFSD HHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHH LVSVAGHIYKFGVDDGLPGADASSKVPINVHADEFNELMGDEFIPMVNKGGGAGVQVTAY HHHHHHHHEEECCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCEECCCCCCEEEEEH TQTLSDIEARIGNRAKAGQVVGNFNNLVMLRVRETATAELLTRQLPKVEVFATSVTSGAT HHHHHHHHHHHCCCCCCCCCEECCCCEEEEEECCHHHHHHHHHHCCCEEEEEEECCCCCC DSSDPTGNTAFTSNTQDRVASTSVPLIEPAHVVALPKGQAFALLEGGNLWKVRMPLPAPD CCCCCCCCCEECCCCHHHHHHCCCCCCCCCEEEEECCCCEEEEEECCCEEEEEECCCCCC PDEAMPRDLQELAAGMRLHYVMDAGSWWDGQGAAGPRDDGLPDDLLQGAFATTEADDPAD CCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC QGGMDGAGMP CCCCCCCCCC >Mature Secondary Structure AQAHAVEVLLRPAVELYTVAVCAGAALACVVAPWSLALSPTLGFASALGFAAFGGIRLQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHH QAHAILRYRRNIRRLPRYVMTSRDVPVSQQRLFLGRGFRWDQRHTHRLMQTYRPEFRRYV HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHC EPTALYRLARRCEERLEFAPPPFARLARWTAWDHPMNPVRPLPPVGGLPRLHGIEPQEVD CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE VTLPLGERVGHTLVLGTTRVGKTRLAELFITQDIRRRAADGGYEVVIVFDPKGDADLLKR EEECCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHH MYVEARRAGREGEFYVFHLGWPDLSARYNAVGRFGRISEVATRIAGQLSGEGNSAAFREF HHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHH AWRFVNIIARALVELGQRPDYLLIQRHVINIDALFMEYAAHFFARTQPKAWEIIVQLEAR HHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHH LNDKNIPRNMIGREKRVIAIEQYLAQVRVYDPVLDGLRSAVRYDRTYFDKIVASLLPLLE CCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLTTGKIAQLLAPNYSDLADPRPIFDWMQVIRKRAIVYVGLDALSDAEVAAAVGNSMFSD HHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHH LVSVAGHIYKFGVDDGLPGADASSKVPINVHADEFNELMGDEFIPMVNKGGGAGVQVTAY HHHHHHHHEEECCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCEECCCCCCEEEEEH TQTLSDIEARIGNRAKAGQVVGNFNNLVMLRVRETATAELLTRQLPKVEVFATSVTSGAT HHHHHHHHHHHCCCCCCCCCEECCCCEEEEEECCHHHHHHHHHHCCCEEEEEEECCCCCC DSSDPTGNTAFTSNTQDRVASTSVPLIEPAHVVALPKGQAFALLEGGNLWKVRMPLPAPD CCCCCCCCCEECCCCHHHHHHCCCCCCCCCEEEEECCCCEEEEEECCCEEEEEECCCCCC PDEAMPRDLQELAAGMRLHYVMDAGSWWDGQGAAGPRDDGLPDDLLQGAFATTEADDPAD CCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC QGGMDGAGMP CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA