| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609208
Identifier: 120609208
GI number: 120609208
Start: 551831
End: 552532
Strand: Reverse
Name: 120609208
Synonym: Aave_0506
Alternate gene names: NA
Gene position: 552532-551831 (Counterclockwise)
Preceding gene: 120609209
Following gene: 120609207
Centisome position: 10.32
GC content: 69.52
Gene sequence:
>702_bases ATGAGCCGCTTTCGCAACGAGGTGGCGCACCTGCAGGCGCACGTGAGCACCCTGCGCCGGGTGGGCGCCGCACTGTTCGC GCTGGCAGTGCTGTTGGGCATCGGCTGGGCGAATGCGCCGCGCCACCTGACCATCCACGTGCCGCCCGACCTGCGCTCGG GCAGCACCCGCAAGTGGTGGGACGTTCCGCCCGAGAACGTGTACGCCTTCGGCTACTACATCTTCCAGCAGCTCAACCGC TGGCCGACGAATGGCGAGGAGGACTACCCCCGCAACCTGCGCGCCCTGTCCGCCTACCTCACCCCATCCTGCCAGGCCCT GCTGCAGCAGGACTACGAGACCCGCCGCAACAACGGCGAACTGCGCCAGCGCGTGCGCGGCCTTTACGAAATCCCGGGCC GCAGCTATGGCGAAGACCCAACTACGCGCGTCAAGGTGCTGTCTGAGCGCGACTGGATCGTGACGCTCGACGTCGCCGCG GACGAGTACTACGCGGGAGAGCAGGTCAAGCGGGCGCTTGTGCGCTACCCGCTGAAGGTAGTCCGCCTCGACATCGATCC CGAGCGCAACCCGTTCGGCCTGGCCCTCGACTGCTACAGCGGTACCCCGCAGCGCATCACGCCGCCCGCCCCGCCGCCCG CGGCCACGACACCGGGTTCCCCGTCCGCGCCCGCCGCGCCCTTGCCTGGAAGCACGCCATGA
Upstream 100 bases:
>100_bases CGCGCTCGGGCTGCTGGACCACGCGCCGCACAGTGCCCGTTCGCCGCCTGCGCGGCCGCCGCGGCTTCCACCCACACCAC GCGAATCCCCGGGGCCGGCC
Downstream 100 bases:
>100_bases CCCGACCCATCTCCTTCGCCCTGCGCGCGCTCGCGCTGGGCGCCACGCTCTGGCTGGGCGGCGCGCCAGCGGCCCATGCA CTGCAGATCCTGCGCTGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MSRFRNEVAHLQAHVSTLRRVGAALFALAVLLGIGWANAPRHLTIHVPPDLRSGSTRKWWDVPPENVYAFGYYIFQQLNR WPTNGEEDYPRNLRALSAYLTPSCQALLQQDYETRRNNGELRQRVRGLYEIPGRSYGEDPTTRVKVLSERDWIVTLDVAA DEYYAGEQVKRALVRYPLKVVRLDIDPERNPFGLALDCYSGTPQRITPPAPPPAATTPGSPSAPAAPLPGSTP
Sequences:
>Translated_233_residues MSRFRNEVAHLQAHVSTLRRVGAALFALAVLLGIGWANAPRHLTIHVPPDLRSGSTRKWWDVPPENVYAFGYYIFQQLNR WPTNGEEDYPRNLRALSAYLTPSCQALLQQDYETRRNNGELRQRVRGLYEIPGRSYGEDPTTRVKVLSERDWIVTLDVAA DEYYAGEQVKRALVRYPLKVVRLDIDPERNPFGLALDCYSGTPQRITPPAPPPAATTPGSPSAPAAPLPGSTP >Mature_232_residues SRFRNEVAHLQAHVSTLRRVGAALFALAVLLGIGWANAPRHLTIHVPPDLRSGSTRKWWDVPPENVYAFGYYIFQQLNRW PTNGEEDYPRNLRALSAYLTPSCQALLQQDYETRRNNGELRQRVRGLYEIPGRSYGEDPTTRVKVLSERDWIVTLDVAAD EYYAGEQVKRALVRYPLKVVRLDIDPERNPFGLALDCYSGTPQRITPPAPPPAATTPGSPSAPAAPLPGSTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26103; Mature: 25972
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFRNEVAHLQAHVSTLRRVGAALFALAVLLGIGWANAPRHLTIHVPPDLRSGSTRKWW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCC DVPPENVYAFGYYIFQQLNRWPTNGEEDYPRNLRALSAYLTPSCQALLQQDYETRRNNGE CCCCCCEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHH LRQRVRGLYEIPGRSYGEDPTTRVKVLSERDWIVTLDVAADEYYAGEQVKRALVRYPLKV HHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHCCEEE VRLDIDPERNPFGLALDCYSGTPQRITPPAPPPAATTPGSPSAPAAPLPGSTP EEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRFRNEVAHLQAHVSTLRRVGAALFALAVLLGIGWANAPRHLTIHVPPDLRSGSTRKWW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCC DVPPENVYAFGYYIFQQLNRWPTNGEEDYPRNLRALSAYLTPSCQALLQQDYETRRNNGE CCCCCCEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHH LRQRVRGLYEIPGRSYGEDPTTRVKVLSERDWIVTLDVAADEYYAGEQVKRALVRYPLKV HHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHCCEEE VRLDIDPERNPFGLALDCYSGTPQRITPPAPPPAATTPGSPSAPAAPLPGSTP EEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA