| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609206
Identifier: 120609206
GI number: 120609206
Start: 549374
End: 550849
Strand: Reverse
Name: 120609206
Synonym: Aave_0504
Alternate gene names: NA
Gene position: 550849-549374 (Counterclockwise)
Preceding gene: 120609207
Following gene: 120609205
Centisome position: 10.29
GC content: 70.33
Gene sequence:
>1476_bases ATGAAAAGTAACGGCCTGCTCAAGTGGCTGATGATCCCGGTGATCGCGCTGCTGGTCTTCCTCGGCATCCATCTCACGTC CGGGCGCTCGGACAAGTCCGCCGCAGGAGGCGGCACCGCGCAGCTCACGCCCGAGGAAATGAAGGCCCTGGGCATCGACG GCGACACGCCGCGCGACACCGTGGCCACCCTGGTCGCGCAGGTCAAGCAACTGCGCGGCGAACTGCAGACCGCCGTCGGC GACAACAAGAACCAGCGCGCGGAAAACGAGCGGCTTCGCCAGCGCGATAGCTCCATCGACCAGCGCATCCAGGCCGCGAT CGACGGTGAGCGCAACCGCCAGCGCCAGGAGAATGACCAAGCCGCCGGCGACAAGCAGCAGACCCAGAGCATGCTGCAGG ACCTGCAGCACAAGCTGGACCAGTTGGGCGCCAAGGGCGGCTCCGCCGACCTGCCGGTCGGGCTCGGTCTGGAGGAAGGC GACGGCAAGGGCTTCGGCACCTCCGGCGCTTCTGGCGTGCGGTGGGTGGAACCCGACGACGCGCGGCCCGACGCGGGCAA GACCGCGCCCGGCGGCCCGGGCAAGGCCGATCGCTTTCCGATGCGCTTCGGCCCCGCCGATGGCGGTACGGGCGGCGGCT CCGCATCCGCCACGCCGGCCGGCACCTCGCCCGCCACCGAGGCCAAGCCCGCCAAGCCCGTCTACACCCTGCCCACCAAC GCCACCCTGATGGGTTCCGTCGCGATGACGGCCCTGATCGGTCGTGTGCCGATCGACGGCACGGTCAACGACCCCTATCC CTTCAAGGTGCTCATCGGCCCCGACAACCTCACGGCCAACGGGATCGACCTGCCGGAGGTGGCGGGCGCCGTGGTGAGCG GCACCGCATCCGGTGACTGGACGCTCTCCTGCGTGCGCGGCCAGATCCGCTCGATCACCTTCGTGTTTCGCGACGGCACC ATCCGCACGGTCCCGGACGACAAGGCCCAGGGCGGCGCCGGCGGCAGCCGCGGCGGCTCTGGCAACGGCAATGCCGCCGA CGGCCAGGGCCCCATCCTGGGCGGCCTGGGCTGGATCAGCGATCCGCACGGCATCCCCTGTGTCGGCGGCGAGCGGCGCA GCAACGCGCAGCAGTACCTCGGATCGCAGGCCCTCATCACTGCCGCTGGCGCCGGCGCGGCGTCGCTCATCAAGAGCGAC AGCGGCAGCGTGGCGGTGGTCAGCAACGGCAACGGCTCGCTCGGCACCGTGGGCATCTCGGGCAACGAGGCCATGGGCCG CATCCTCGCCGGCGGCGTGCAGGAGATGTCCCAGTGGGTGAACAAGCTCTACGGCCAGGCTTTCGCGGCGGTGTACGTGC CACCCGGCGCGCAGGTCGCCGTCCACCTCGAACAACCCCTGCAGATCGACTACGAAGCCCAGGGCCGCAAGGTCCGCCAC ACCACCGGAGGAATCCATGCGATCGACCTGGACTGA
Upstream 100 bases:
>100_bases CGCATCGACGCCGCACAGAACCTGCCGCCGCCCGCAGCCGACGCTGCCGCAGTCACGGAGGCCACGCCGGCCACCCCGCG CCAGCCTTCGGGAGCAGACC
Downstream 100 bases:
>100_bases GCGCCGCATGCCGCGGCGCCACCTGCTCGCCACCATCGCCTTGCTGCTGTCGGGCTGCGCAACGCACAAGGACGACCTGC TGTCGCACGGCGACCGGACG
Product: hypothetical protein
Products: NA
Alternate protein names: Exported Protein
Number of amino acids: Translated: 491; Mature: 491
Protein sequence:
>491_residues MKSNGLLKWLMIPVIALLVFLGIHLTSGRSDKSAAGGGTAQLTPEEMKALGIDGDTPRDTVATLVAQVKQLRGELQTAVG DNKNQRAENERLRQRDSSIDQRIQAAIDGERNRQRQENDQAAGDKQQTQSMLQDLQHKLDQLGAKGGSADLPVGLGLEEG DGKGFGTSGASGVRWVEPDDARPDAGKTAPGGPGKADRFPMRFGPADGGTGGGSASATPAGTSPATEAKPAKPVYTLPTN ATLMGSVAMTALIGRVPIDGTVNDPYPFKVLIGPDNLTANGIDLPEVAGAVVSGTASGDWTLSCVRGQIRSITFVFRDGT IRTVPDDKAQGGAGGSRGGSGNGNAADGQGPILGGLGWISDPHGIPCVGGERRSNAQQYLGSQALITAAGAGAASLIKSD SGSVAVVSNGNGSLGTVGISGNEAMGRILAGGVQEMSQWVNKLYGQAFAAVYVPPGAQVAVHLEQPLQIDYEAQGRKVRH TTGGIHAIDLD
Sequences:
>Translated_491_residues MKSNGLLKWLMIPVIALLVFLGIHLTSGRSDKSAAGGGTAQLTPEEMKALGIDGDTPRDTVATLVAQVKQLRGELQTAVG DNKNQRAENERLRQRDSSIDQRIQAAIDGERNRQRQENDQAAGDKQQTQSMLQDLQHKLDQLGAKGGSADLPVGLGLEEG DGKGFGTSGASGVRWVEPDDARPDAGKTAPGGPGKADRFPMRFGPADGGTGGGSASATPAGTSPATEAKPAKPVYTLPTN ATLMGSVAMTALIGRVPIDGTVNDPYPFKVLIGPDNLTANGIDLPEVAGAVVSGTASGDWTLSCVRGQIRSITFVFRDGT IRTVPDDKAQGGAGGSRGGSGNGNAADGQGPILGGLGWISDPHGIPCVGGERRSNAQQYLGSQALITAAGAGAASLIKSD SGSVAVVSNGNGSLGTVGISGNEAMGRILAGGVQEMSQWVNKLYGQAFAAVYVPPGAQVAVHLEQPLQIDYEAQGRKVRH TTGGIHAIDLD >Mature_491_residues MKSNGLLKWLMIPVIALLVFLGIHLTSGRSDKSAAGGGTAQLTPEEMKALGIDGDTPRDTVATLVAQVKQLRGELQTAVG DNKNQRAENERLRQRDSSIDQRIQAAIDGERNRQRQENDQAAGDKQQTQSMLQDLQHKLDQLGAKGGSADLPVGLGLEEG DGKGFGTSGASGVRWVEPDDARPDAGKTAPGGPGKADRFPMRFGPADGGTGGGSASATPAGTSPATEAKPAKPVYTLPTN ATLMGSVAMTALIGRVPIDGTVNDPYPFKVLIGPDNLTANGIDLPEVAGAVVSGTASGDWTLSCVRGQIRSITFVFRDGT IRTVPDDKAQGGAGGSRGGSGNGNAADGQGPILGGLGWISDPHGIPCVGGERRSNAQQYLGSQALITAAGAGAASLIKSD SGSVAVVSNGNGSLGTVGISGNEAMGRILAGGVQEMSQWVNKLYGQAFAAVYVPPGAQVAVHLEQPLQIDYEAQGRKVRH TTGGIHAIDLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50333; Mature: 50333
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSNGLLKWLMIPVIALLVFLGIHLTSGRSDKSAAGGGTAQLTPEEMKALGIDGDTPRDT CCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHEECCCCCCCHHH VATLVAQVKQLRGELQTAVGDNKNQRAENERLRQRDSSIDQRIQAAIDGERNRQRQENDQ HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH AAGDKQQTQSMLQDLQHKLDQLGAKGGSADLPVGLGLEEGDGKGFGTSGASGVRWVEPDD HCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEECCCCC ARPDAGKTAPGGPGKADRFPMRFGPADGGTGGGSASATPAGTSPATEAKPAKPVYTLPTN CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC ATLMGSVAMTALIGRVPIDGTVNDPYPFKVLIGPDNLTANGIDLPEVAGAVVSGTASGDW CHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHEECCCCCCE TLSCVRGQIRSITFVFRDGTIRTVPDDKAQGGAGGSRGGSGNGNAADGQGPILGGLGWIS EEHHHHCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC DPHGIPCVGGERRSNAQQYLGSQALITAAGAGAASLIKSDSGSVAVVSNGNGSLGTVGIS CCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCHHHHHCCCCCCEEEEECCCCCEEEEEEC GNEAMGRILAGGVQEMSQWVNKLYGQAFAAVYVPPGAQVAVHLEQPLQIDYEAQGRKVRH CCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEEEEECCCCEECCCCCCCEEEE TTGGIHAIDLD CCCCEEEEECC >Mature Secondary Structure MKSNGLLKWLMIPVIALLVFLGIHLTSGRSDKSAAGGGTAQLTPEEMKALGIDGDTPRDT CCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHEECCCCCCCHHH VATLVAQVKQLRGELQTAVGDNKNQRAENERLRQRDSSIDQRIQAAIDGERNRQRQENDQ HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH AAGDKQQTQSMLQDLQHKLDQLGAKGGSADLPVGLGLEEGDGKGFGTSGASGVRWVEPDD HCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEECCCCC ARPDAGKTAPGGPGKADRFPMRFGPADGGTGGGSASATPAGTSPATEAKPAKPVYTLPTN CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC ATLMGSVAMTALIGRVPIDGTVNDPYPFKVLIGPDNLTANGIDLPEVAGAVVSGTASGDW CHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHEECCCCCCE TLSCVRGQIRSITFVFRDGTIRTVPDDKAQGGAGGSRGGSGNGNAADGQGPILGGLGWIS EEHHHHCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC DPHGIPCVGGERRSNAQQYLGSQALITAAGAGAASLIKSDSGSVAVVSNGNGSLGTVGIS CCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCHHHHHCCCCCCEEEEECCCCCEEEEEEC GNEAMGRILAGGVQEMSQWVNKLYGQAFAAVYVPPGAQVAVHLEQPLQIDYEAQGRKVRH CCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEEEEECCCCEECCCCCCCEEEE TTGGIHAIDLD CCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA