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The map label for this gene is tse [H]

Identifier: 120609110

GI number: 120609110

Start: 436361

End: 437938

Strand: Reverse

Name: tse [H]

Synonym: Aave_0407

Alternate gene names: 120609110

Gene position: 437938-436361 (Counterclockwise)

Preceding gene: 120609111

Following gene: 120609109

Centisome position: 8.18

GC content: 69.52

Gene sequence:

>1578_bases
ATGAAATTCCAAGATTTATCCATTGGAAAGCGTCTGGCGCTGGCCTTCGGCCTGCTGACGTTTTTCATCGTGGGCATGCT
GGCCGTCGGCTCGTGGCGGCTGCAGTCCGTCGCTCAGGACACCGCCGCGATGATGAACCTGCCCCTGGCGAAGGAGCGGC
TGATCTCGGATTGGTACCGCACCATCTACACCAACGTATCGCGCCATGCCCTGGTCGCACGCAGCAGCGACACGGCCCTG
GCCGGCCGGTTCACGCAGGAAAACGCGGCGGCCTCCCGCCAATCGACGGAGCAGCAGCAGCAACTGGCCCAACTCATCTC
CGGCCCTGAAGAACAGGCGCTCTTCGACCGGGCCGGCGTGCTGCGCAAGCAGTTCGTCACCGCACGCGACGCGATCTACC
GGGCCAAGGTCGAGGGTCGGTCGGACGACGCCCAGCGTATCCTGGACACCGAGTTCACTCCGTCCGGCAAGGGCTACCTG
GATGCGCTGCAGGCCTTGCTGGACTTCCAGCGCAAGCAGATCAACGAAGCCGCCGCCTCGGTGCACAGCAACTACGAAAG
CGGCCGCGACGCGCTGATCCTGCTGGGCCTGCTGGCCACCGCGGCGGCCGTGGCGCTGGCTATCGGCATCACGCGCAGCG
TGACACGGCCCCTGCACCGCGCCGTGTCGGTGGCGGAGTCCGTGGCCGGCGGCGACCTGACGGTGCGCTCCGGCAGCGCG
GCGCGCGACGAGATGGGCCAGTTGCTGCGCGCCCTGGACGCCATGGCCGCCCGATTGCGCGACACCGTCGGCCAGGTGCG
CCGCGGCGCGGACGGCATCGCCCTCGCCTCCAGCGAGATCGCCACCGGCAACCTGGACCTGTCCAGCCGCACCGAAGAGC
AGGCCAGCGCACTGCAGCAGACCGCCGCGTCGATGGAACAGATGACCGCCACGGTCCGGCAGAACGCGGACAACGCCGCG
CAGGCCGACCAGCTGGCGCGCTCCGCGTCCGAGATGGCGGTGCGCGGCGGCGAGGTGGTCGGCAACGTCGTGACGACGAT
GGGCGGCATCCACAGCGCTTCGCGCAAGATCGTGGACATCATCGGCGTGATCGACTCCATCGCGTTCCAGACCAACATCC
TGGCGCTCAACGCCGCCGTCGAGGCCGCGCGGGCCGGCGAGCAGGGCCGCGGCTTCGCCGTGGTGGCCAGCGAGGTGCGC
ACGCTGGCGCAGCGCAGCGCCACCGCCGCGAAGGAGATCAAGGCCCTCATCGACGATTCCGTCAACCAGGTGGACGCGGG
CAACCGGCTGGTGGAAGAAGCCGGCACGGTGATCCGCGACGTGGTGGCCGGCGTGCGCCGCGTGACCGACATCGTGGCCG
AAATCAGCGCCGCCAGCCAGGAACAGACCAGCGGGCTGGAACAGGTGAACCGGGCCATCGCGCAGATGGACCAGGTCACC
CAGCAGAACGCCGCGCTGGTGGAAGAAGCGGCGGCCGCCACGGGTTCGCTGGAAGCACAGGCTTCGCAACTGGTGCAGGC
GGTGGCGGTCTTCCGCCTGGCCGAAGCGGGAACGGCACTGCCGCGGCTGGCCGCCTGA

Upstream 100 bases:

>100_bases
TTCGTGGCGAAAAACCCTCGCCAACCACGGTCACCCTGGCGGCCTCGCAGGGTGCAAAATAAACATCAAGTTACAATCAG
GGTTTACCCTGAAACAACCC

Downstream 100 bases:

>100_bases
AAGCCCCATTGCTGCGCTATCGATAGCAGCGGGCGCTGTCCTTCATGGGCCTACACTGGCCCCATGCCCGACGCCGCCCC
GCTTCCGGACCCTGCCCGCT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 525; Mature: 525

Protein sequence:

>525_residues
MKFQDLSIGKRLALAFGLLTFFIVGMLAVGSWRLQSVAQDTAAMMNLPLAKERLISDWYRTIYTNVSRHALVARSSDTAL
AGRFTQENAAASRQSTEQQQQLAQLISGPEEQALFDRAGVLRKQFVTARDAIYRAKVEGRSDDAQRILDTEFTPSGKGYL
DALQALLDFQRKQINEAAASVHSNYESGRDALILLGLLATAAAVALAIGITRSVTRPLHRAVSVAESVAGGDLTVRSGSA
ARDEMGQLLRALDAMAARLRDTVGQVRRGADGIALASSEIATGNLDLSSRTEEQASALQQTAASMEQMTATVRQNADNAA
QADQLARSASEMAVRGGEVVGNVVTTMGGIHSASRKIVDIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR
TLAQRSATAAKEIKALIDDSVNQVDAGNRLVEEAGTVIRDVVAGVRRVTDIVAEISAASQEQTSGLEQVNRAIAQMDQVT
QQNAALVEEAAAATGSLEAQASQLVQAVAVFRLAEAGTALPRLAA

Sequences:

>Translated_525_residues
MKFQDLSIGKRLALAFGLLTFFIVGMLAVGSWRLQSVAQDTAAMMNLPLAKERLISDWYRTIYTNVSRHALVARSSDTAL
AGRFTQENAAASRQSTEQQQQLAQLISGPEEQALFDRAGVLRKQFVTARDAIYRAKVEGRSDDAQRILDTEFTPSGKGYL
DALQALLDFQRKQINEAAASVHSNYESGRDALILLGLLATAAAVALAIGITRSVTRPLHRAVSVAESVAGGDLTVRSGSA
ARDEMGQLLRALDAMAARLRDTVGQVRRGADGIALASSEIATGNLDLSSRTEEQASALQQTAASMEQMTATVRQNADNAA
QADQLARSASEMAVRGGEVVGNVVTTMGGIHSASRKIVDIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR
TLAQRSATAAKEIKALIDDSVNQVDAGNRLVEEAGTVIRDVVAGVRRVTDIVAEISAASQEQTSGLEQVNRAIAQMDQVT
QQNAALVEEAAAATGSLEAQASQLVQAVAVFRLAEAGTALPRLAA
>Mature_525_residues
MKFQDLSIGKRLALAFGLLTFFIVGMLAVGSWRLQSVAQDTAAMMNLPLAKERLISDWYRTIYTNVSRHALVARSSDTAL
AGRFTQENAAASRQSTEQQQQLAQLISGPEEQALFDRAGVLRKQFVTARDAIYRAKVEGRSDDAQRILDTEFTPSGKGYL
DALQALLDFQRKQINEAAASVHSNYESGRDALILLGLLATAAAVALAIGITRSVTRPLHRAVSVAESVAGGDLTVRSGSA
ARDEMGQLLRALDAMAARLRDTVGQVRRGADGIALASSEIATGNLDLSSRTEEQASALQQTAASMEQMTATVRQNADNAA
QADQLARSASEMAVRGGEVVGNVVTTMGGIHSASRKIVDIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR
TLAQRSATAAKEIKALIDDSVNQVDAGNRLVEEAGTVIRDVVAGVRRVTDIVAEISAASQEQTSGLEQVNRAIAQMDQVT
QQNAALVEEAAAATGSLEAQASQLVQAVAVFRLAEAGTALPRLAA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=396, Percent_Identity=50.5050505050505, Blast_Score=331, Evalue=9e-92,
Organism=Escherichia coli, GI2367378, Length=368, Percent_Identity=55.9782608695652, Blast_Score=328, Evalue=6e-91,
Organism=Escherichia coli, GI1788195, Length=306, Percent_Identity=61.1111111111111, Blast_Score=320, Evalue=1e-88,
Organism=Escherichia coli, GI1788194, Length=368, Percent_Identity=50.8152173913043, Blast_Score=303, Evalue=2e-83,
Organism=Escherichia coli, GI1789453, Length=320, Percent_Identity=41.25, Blast_Score=219, Evalue=3e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 55466; Mature: 55466

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFQDLSIGKRLALAFGLLTFFIVGMLAVGSWRLQSVAQDTAAMMNLPLAKERLISDWYR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
TIYTNVSRHALVARSSDTALAGRFTQENAAASRQSTEQQQQLAQLISGPEEQALFDRAGV
HHHHCCHHHHHEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LRKQFVTARDAIYRAKVEGRSDDAQRILDTEFTPSGKGYLDALQALLDFQRKQINEAAAS
HHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VHSNYESGRDALILLGLLATAAAVALAIGITRSVTRPLHRAVSVAESVAGGDLTVRSGSA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC
ARDEMGQLLRALDAMAARLRDTVGQVRRGADGIALASSEIATGNLDLSSRTEEQASALQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHH
TAASMEQMTATVRQNADNAAQADQLARSASEMAVRGGEVVGNVVTTMGGIHSASRKIVDI
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
IGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSATAAKEIKALIDDS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VNQVDAGNRLVEEAGTVIRDVVAGVRRVTDIVAEISAASQEQTSGLEQVNRAIAQMDQVT
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQNAALVEEAAAATGSLEAQASQLVQAVAVFRLAEAGTALPRLAA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKFQDLSIGKRLALAFGLLTFFIVGMLAVGSWRLQSVAQDTAAMMNLPLAKERLISDWYR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
TIYTNVSRHALVARSSDTALAGRFTQENAAASRQSTEQQQQLAQLISGPEEQALFDRAGV
HHHHCCHHHHHEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LRKQFVTARDAIYRAKVEGRSDDAQRILDTEFTPSGKGYLDALQALLDFQRKQINEAAAS
HHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VHSNYESGRDALILLGLLATAAAVALAIGITRSVTRPLHRAVSVAESVAGGDLTVRSGSA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC
ARDEMGQLLRALDAMAARLRDTVGQVRRGADGIALASSEIATGNLDLSSRTEEQASALQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHH
TAASMEQMTATVRQNADNAAQADQLARSASEMAVRGGEVVGNVVTTMGGIHSASRKIVDI
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
IGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSATAAKEIKALIDDS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VNQVDAGNRLVEEAGTVIRDVVAGVRRVTDIVAEISAASQEQTSGLEQVNRAIAQMDQVT
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQNAALVEEAAAATGSLEAQASQLVQAVAVFRLAEAGTALPRLAA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]