| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609099
Identifier: 120609099
GI number: 120609099
Start: 426367
End: 426855
Strand: Reverse
Name: 120609099
Synonym: Aave_0396
Alternate gene names: NA
Gene position: 426855-426367 (Counterclockwise)
Preceding gene: 120609104
Following gene: 120609098
Centisome position: 7.97
GC content: 61.76
Gene sequence:
>489_bases ATGGGGCTTGCTCGCACCTGCGCTCAGTTGCGGCAAGCCGTGTGTCAACGCACGGAAAGGATCGGAGCCATGCCAGAGCT TCAAGACCGGCAGCAGCCGGAGATCATTGACGCGGATTTTCGAGAAGTCTGCACAACGGGCTATCAGCCCTCACCCATTC AACGTATCGCAGGCAGCACAGTGGCTGCAGCATGCTGTGCGCTTATGCTCGCGGCAGGGTTCGAGCTGATCGACGGCCGC ATTGCGATGCTGCTCTTGCTTGTGCTCGGGGCAGGTGGATACCTCGCTTATATCCACCTGCAGGCGAACCGGCCTGGCTT CGTGTTCTTCGCAGCCGTTGCCTTGCTGGCGATCGGAGCATCCGTCGCCTTCGCTGGGTACTATCCCCTCGCTTCTCTGG TTGCGCTCGCAGTCGGTGGCATCAGCGGCGCGCTCGCTCGCGCCGCGAGGGTTGACGATGCGCCCTGTCAAAGGAGCACG CTCAAATGA
Upstream 100 bases:
>100_bases GATCGTTCCCTGCGGGCCTTTTGAACGTTTTGGCGGATGTTCCCTTGGAGGAACTAGGCACAGGAGCAGGAGCGAGCCTT AGCCAGCCTTGTGCTGGCGT
Downstream 100 bases:
>100_bases CGTCGTGCATCACCCAGCGACGCGCGGCGCTCTTGCTGCTCGTCATCGCATTGACCCTCTTTGCGGCGGATGCGGCCTTA GCAGACGTGCTGAACGACAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MGLARTCAQLRQAVCQRTERIGAMPELQDRQQPEIIDADFREVCTTGYQPSPIQRIAGSTVAAACCALMLAAGFELIDGR IAMLLLLVLGAGGYLAYIHLQANRPGFVFFAAVALLAIGASVAFAGYYPLASLVALAVGGISGALARAARVDDAPCQRST LK
Sequences:
>Translated_162_residues MGLARTCAQLRQAVCQRTERIGAMPELQDRQQPEIIDADFREVCTTGYQPSPIQRIAGSTVAAACCALMLAAGFELIDGR IAMLLLLVLGAGGYLAYIHLQANRPGFVFFAAVALLAIGASVAFAGYYPLASLVALAVGGISGALARAARVDDAPCQRST LK >Mature_161_residues GLARTCAQLRQAVCQRTERIGAMPELQDRQQPEIIDADFREVCTTGYQPSPIQRIAGSTVAAACCALMLAAGFELIDGRI AMLLLLVLGAGGYLAYIHLQANRPGFVFFAAVALLAIGASVAFAGYYPLASLVALAVGGISGALARAARVDDAPCQRSTL K
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16986; Mature: 16855
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLARTCAQLRQAVCQRTERIGAMPELQDRQQPEIIDADFREVCTTGYQPSPIQRIAGST CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHCCH VAAACCALMLAAGFELIDGRIAMLLLLVLGAGGYLAYIHLQANRPGFVFFAAVALLAIGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHH SVAFAGYYPLASLVALAVGGISGALARAARVDDAPCQRSTLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure GLARTCAQLRQAVCQRTERIGAMPELQDRQQPEIIDADFREVCTTGYQPSPIQRIAGST CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHCCH VAAACCALMLAAGFELIDGRIAMLLLLVLGAGGYLAYIHLQANRPGFVFFAAVALLAIGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHH SVAFAGYYPLASLVALAVGGISGALARAARVDDAPCQRSTLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA