| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120608959
Identifier: 120608959
GI number: 120608959
Start: 286027
End: 287292
Strand: Reverse
Name: 120608959
Synonym: Aave_0256
Alternate gene names: NA
Gene position: 287292-286027 (Counterclockwise)
Preceding gene: 120608960
Following gene: 120608955
Centisome position: 5.37
GC content: 72.83
Gene sequence:
>1266_bases ATGCCACAGCACACCGACGCCACCCATGACCCGTCCCTGCGCAGCTGGGTCGAATCCGCCAACGCCGCGGGCTGCGATTT TCCCATCCAGAACCTGCCCTTCGGCCGCTTCCGCGCGCACGACGGCAGCGCCCGCATCGGCGTGGCCATCGGCGACCGGA TCCTGGATATCCAGGCCGCCGGCCTCGTGGCCGGCGACGACATGAACGCGCTGATGGCCGCAGGGCCGCAGGCGCGCCGG GCCTTGCGGACGCGCCTTTCGCAGGGCCTCGCCGCCGGCAGCGCGCAGCAGGCCGCATGGCAGGACGCGCTGCTGCCGCA GGCGGGCACCGGGATGCTCATGCCCTGCCGCATCGGTGACTACACCGACTTCTACACCAGCGTGCACCACGCCACCAACG TGGGCCGGCAGTTCCGCCCCGACAACCCGCTGCTGCCCAACTACCAGTGGGTGCCGATCGGCTACCACGGCCGCGCGTCC TCCATCGGCGTGAGCGGCGCGGCGGTGCGGCGTCCCCGCGGCCAGCTCAAGGCCCCCGAGGCCGCGGCCCCCGTGCTCGC GCCCAGCCGGCGGCTGGACTACGAACTGGAGCTGGGCTGGTTCGTCGGCACGGGCAATGCGCAGGGCGAGCCCATCGGCA TCGGCGAGGCGGAGGACCACCTGTTCGGCGTCGCGCTCTTCAACGACTGGAGCGCGCGCGACATCCAGGGCTGGGAATAC CAGCCGCTGGGCCCTTTTCTCTCGAAGAATTTCGCGAGCACCCTCTCGCCCTGGGTGGTGACGCTGGAGGCGCTCGCGCC CTTCCGCGCGCCCTTCACAAGACCCGACGAAGATCCGCAGCCGCTGCCCTACCTGGATTCTCCCGACCACCGCGCCGCGG GCGCTTTCGCGATCACGCTCGAAGTGCTGCTGCAGACGGAGCGCATGCGCACCGAGGGCCTGCCGCCCGCGGTGCTCTCG CGCACCGACACCACGCGCGCCGCCTACTGGACACCCGCGCAACTGGTGGCGCACCACACGGTGAACGGCTGCAACCTGCA CAGTGGCGACCTGCTCGGCTCGGGCACGCTGTCGGGCCCCGGCCCGCAGGAGGCAGGCTCCCTGCTGGAGCTGGCCGCGG CCGGCCGTCAGCCCGTGCGCCTGCCGTCCGGCGAGGAGCGCAGCTTCCTGGAGGACGGCGACACCGTCACGCTGCGCGGC TGGTGCGAGCGCGAAGGCGCGGCGCGCATCGGGCTGGGCGAGGCCAGCGGCACGGTCACCGGCTGA
Upstream 100 bases:
>100_bases GGGAGCACTGACGCTGCGCGAGTACGACCGCCTGGGTCAGGTGGCCCGCGCGGCCGGGATGACCGCCGACTGACCGGACC CTGTCCAGCAAGGCCCCGCC
Downstream 100 bases:
>100_bases CGGCGGCCACCACCGGCGTCGAGCGCCCCGTACGCCGGCCGCTTACTTCGCCACCTTCAGCACGCGCCAGTCGATGCGGT TGTCGGCGCGGTGCGGCAGT
Product: fumarylacetoacetate hydrolase
Products: acetoacetate; fumarate
Alternate protein names: Fumarylacetoacetate Hydrolase; Hydroxylase; Fumarylacetoacetase Hydrolase; LOW QUALITY PROTEIN Fumarylacetoacetase
Number of amino acids: Translated: 421; Mature: 420
Protein sequence:
>421_residues MPQHTDATHDPSLRSWVESANAAGCDFPIQNLPFGRFRAHDGSARIGVAIGDRILDIQAAGLVAGDDMNALMAAGPQARR ALRTRLSQGLAAGSAQQAAWQDALLPQAGTGMLMPCRIGDYTDFYTSVHHATNVGRQFRPDNPLLPNYQWVPIGYHGRAS SIGVSGAAVRRPRGQLKAPEAAAPVLAPSRRLDYELELGWFVGTGNAQGEPIGIGEAEDHLFGVALFNDWSARDIQGWEY QPLGPFLSKNFASTLSPWVVTLEALAPFRAPFTRPDEDPQPLPYLDSPDHRAAGAFAITLEVLLQTERMRTEGLPPAVLS RTDTTRAAYWTPAQLVAHHTVNGCNLHSGDLLGSGTLSGPGPQEAGSLLELAAAGRQPVRLPSGEERSFLEDGDTVTLRG WCEREGAARIGLGEASGTVTG
Sequences:
>Translated_421_residues MPQHTDATHDPSLRSWVESANAAGCDFPIQNLPFGRFRAHDGSARIGVAIGDRILDIQAAGLVAGDDMNALMAAGPQARR ALRTRLSQGLAAGSAQQAAWQDALLPQAGTGMLMPCRIGDYTDFYTSVHHATNVGRQFRPDNPLLPNYQWVPIGYHGRAS SIGVSGAAVRRPRGQLKAPEAAAPVLAPSRRLDYELELGWFVGTGNAQGEPIGIGEAEDHLFGVALFNDWSARDIQGWEY QPLGPFLSKNFASTLSPWVVTLEALAPFRAPFTRPDEDPQPLPYLDSPDHRAAGAFAITLEVLLQTERMRTEGLPPAVLS RTDTTRAAYWTPAQLVAHHTVNGCNLHSGDLLGSGTLSGPGPQEAGSLLELAAAGRQPVRLPSGEERSFLEDGDTVTLRG WCEREGAARIGLGEASGTVTG >Mature_420_residues PQHTDATHDPSLRSWVESANAAGCDFPIQNLPFGRFRAHDGSARIGVAIGDRILDIQAAGLVAGDDMNALMAAGPQARRA LRTRLSQGLAAGSAQQAAWQDALLPQAGTGMLMPCRIGDYTDFYTSVHHATNVGRQFRPDNPLLPNYQWVPIGYHGRASS IGVSGAAVRRPRGQLKAPEAAAPVLAPSRRLDYELELGWFVGTGNAQGEPIGIGEAEDHLFGVALFNDWSARDIQGWEYQ PLGPFLSKNFASTLSPWVVTLEALAPFRAPFTRPDEDPQPLPYLDSPDHRAAGAFAITLEVLLQTERMRTEGLPPAVLSR TDTTRAAYWTPAQLVAHHTVNGCNLHSGDLLGSGTLSGPGPQEAGSLLELAAAGRQPVRLPSGEERSFLEDGDTVTLRGW CEREGAARIGLGEASGTVTG
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4557587, Length=420, Percent_Identity=46.1904761904762, Blast_Score=351, Evalue=8e-97, Organism=Caenorhabditis elegans, GI17568863, Length=415, Percent_Identity=48.433734939759, Blast_Score=345, Evalue=4e-95, Organism=Drosophila melanogaster, GI24657182, Length=409, Percent_Identity=44.4987775061125, Blast_Score=331, Evalue=4e-91,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.7.1.2
Molecular weight: Translated: 45002; Mature: 44871
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQHTDATHDPSLRSWVESANAAGCDFPIQNLPFGRFRAHDGSARIGVAIGDRILDIQAA CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCEEEEEECCEEEEEEEC GLVAGDDMNALMAAGPQARRALRTRLSQGLAAGSAQQAAWQDALLPQAGTGMLMPCRIGD CEEECCCCHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEECCC YTDFYTSVHHATNVGRQFRPDNPLLPNYQWVPIGYHGRASSIGVSGAAVRRPRGQLKAPE HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCC AAAPVLAPSRRLDYELELGWFVGTGNAQGEPIGIGEAEDHLFGVALFNDWSARDIQGWEY CCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCC QPLGPFLSKNFASTLSPWVVTLEALAPFRAPFTRPDEDPQPLPYLDSPDHRAAGAFAITL CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH EVLLQTERMRTEGLPPAVLSRTDTTRAAYWTPAQLVAHHTVNGCNLHSGDLLGSGTLSGP HHHHHHHHHHHCCCCHHHHCCCCCCCEEECCHHHHHHHHCCCCCCCCCCCEECCCCCCCC GPQEAGSLLELAAAGRQPVRLPSGEERSFLEDGDTVTLRGWCEREGAARIGLGEASGTVT CHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCCEEECCCCCCCCC G C >Mature Secondary Structure PQHTDATHDPSLRSWVESANAAGCDFPIQNLPFGRFRAHDGSARIGVAIGDRILDIQAA CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCEEEEEECCEEEEEEEC GLVAGDDMNALMAAGPQARRALRTRLSQGLAAGSAQQAAWQDALLPQAGTGMLMPCRIGD CEEECCCCHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEECCC YTDFYTSVHHATNVGRQFRPDNPLLPNYQWVPIGYHGRASSIGVSGAAVRRPRGQLKAPE HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCC AAAPVLAPSRRLDYELELGWFVGTGNAQGEPIGIGEAEDHLFGVALFNDWSARDIQGWEY CCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCC QPLGPFLSKNFASTLSPWVVTLEALAPFRAPFTRPDEDPQPLPYLDSPDHRAAGAFAITL CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH EVLLQTERMRTEGLPPAVLSRTDTTRAAYWTPAQLVAHHTVNGCNLHSGDLLGSGTLSGP HHHHHHHHHHHCCCCHHHHCCCCCCCEEECCHHHHHHHHCCCCCCCCCCCEECCCCCCCC GPQEAGSLLELAAAGRQPVRLPSGEERSFLEDGDTVTLRGWCEREGAARIGLGEASGTVT CHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCCEEECCCCCCCCC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-fumarylacetoacetate; H2O
Specific reaction: 4-fumarylacetoacetate + H2O = acetoacetate + fumarate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA