| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is allA [H]
Identifier: 120608914
GI number: 120608914
Start: 231095
End: 231610
Strand: Reverse
Name: allA [H]
Synonym: Aave_0207
Alternate gene names: 120608914
Gene position: 231610-231095 (Counterclockwise)
Preceding gene: 120608915
Following gene: 120608911
Centisome position: 4.33
GC content: 74.61
Gene sequence:
>516_bases ATGAGCGGGGCAGTAGTGCTGCCGGTGCGGCCCCTCACCGCCGAAGCCTTCGCGCCCTACGGCCAGGTGATCGCACCGGG CGGCAACGGCACCCGGCAGATCCCCATCAACGACGGCCGCTGCATGCGCCACCACGACCTGGCCCGGCCCTTCGCCGCCG GCCCCGGCACCGTGGCCTTGAGCCTGTTCGATGCCGCAGCCACCGCGCTGCCCGCGCGGCTCACGCTGATGGAGCGGCAC CGGCTGGGCAGCCAGTCCTTCGCGCCCTTCGGCGCCGCGCTGCAGCTGTTGGCCGTGGTGGCCGATGCGGGCATCGCGCC CGAAGCGCTGGGCCCGGAGCACCTGCGCGCCTTCGTCACCGACGGCCGGCAGGGGCTGCAACTGGCCCCCGGCGTGTGGC ACCACCCGCTGCTGTCGCTGCAGGCCGGCCTCTGGCTGGTGGCCGACCGCATCGCGGCGGAGGTGGATTGCGACGTGGTG CGCATCCACGCCTGGGGCGTGGACTGCGGGCTGTAG
Upstream 100 bases:
>100_bases TGTTCATGCACCAGGGCCGCGTGCATGAATGCGGGCCCGCCAGGGAGTTGTTCGCCCAGCCGCGCACTCCGGAGCTGGCC GGCTTCATCGGCGCGGTGCA
Downstream 100 bases:
>100_bases GGCCGCGCGCTACAGGGCCGCGGCCTCGCGGGTGGCGAGCGCCGCATGCACCCGCACGATGTCTTCCGTCACCCGCAGGA ACGCATCCACGTCCTGTGCC
Product: ureidoglycolate hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MSGAVVLPVRPLTAEAFAPYGQVIAPGGNGTRQIPINDGRCMRHHDLARPFAAGPGTVALSLFDAAATALPARLTLMERH RLGSQSFAPFGAALQLLAVVADAGIAPEALGPEHLRAFVTDGRQGLQLAPGVWHHPLLSLQAGLWLVADRIAAEVDCDVV RIHAWGVDCGL
Sequences:
>Translated_171_residues MSGAVVLPVRPLTAEAFAPYGQVIAPGGNGTRQIPINDGRCMRHHDLARPFAAGPGTVALSLFDAAATALPARLTLMERH RLGSQSFAPFGAALQLLAVVADAGIAPEALGPEHLRAFVTDGRQGLQLAPGVWHHPLLSLQAGLWLVADRIAAEVDCDVV RIHAWGVDCGL >Mature_170_residues SGAVVLPVRPLTAEAFAPYGQVIAPGGNGTRQIPINDGRCMRHHDLARPFAAGPGTVALSLFDAAATALPARLTLMERHR LGSQSFAPFGAALQLLAVVADAGIAPEALGPEHLRAFVTDGRQGLQLAPGVWHHPLLSLQAGLWLVADRIAAEVDCDVVR IHAWGVDCGL
Specific function: Involved In The Anaerobic Utilization Of Allantoin. Reinforces The Induction Of Genes Involved In The Degradation Of Allantoin And Glyoxylate By Producing Glyoxylate. [C]
COG id: COG3194
COG function: function code F; Ureidoglycolate hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureidoglycolate hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1786714, Length=157, Percent_Identity=36.3057324840764, Blast_Score=82, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR007247 [H]
Pfam domain/function: PF04115 Ureidogly_hydro [H]
EC number: =3.5.3.19 [H]
Molecular weight: Translated: 17916; Mature: 17785
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGAVVLPVRPLTAEAFAPYGQVIAPGGNGTRQIPINDGRCMRHHDLARPFAAGPGTVAL CCCEEEEECCCCCHHHCCCCCCEEECCCCCCEEEECCCCCCCHHHHHCCCCCCCCCCEEE SLFDAAATALPARLTLMERHRLGSQSFAPFGAALQLLAVVADAGIAPEALGPEHLRAFVT HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH DGRQGLQLAPGVWHHPLLSLQAGLWLVADRIAAEVDCDVVRIHAWGVDCGL CCCCCCEECCCCHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEECCCCCC >Mature Secondary Structure SGAVVLPVRPLTAEAFAPYGQVIAPGGNGTRQIPINDGRCMRHHDLARPFAAGPGTVAL CCEEEEECCCCCHHHCCCCCCEEECCCCCCEEEECCCCCCCHHHHHCCCCCCCCCCEEE SLFDAAATALPARLTLMERHRLGSQSFAPFGAALQLLAVVADAGIAPEALGPEHLRAFVT HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH DGRQGLQLAPGVWHHPLLSLQAGLWLVADRIAAEVDCDVVRIHAWGVDCGL CCCCCCEECCCCHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11320133 [H]