| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is pckG [H]
Identifier: 120608846
GI number: 120608846
Start: 147863
End: 149725
Strand: Reverse
Name: pckG [H]
Synonym: Aave_0138
Alternate gene names: 120608846
Gene position: 149725-147863 (Counterclockwise)
Preceding gene: 120608847
Following gene: 120608844
Centisome position: 2.8
GC content: 66.67
Gene sequence:
>1863_bases ATGAACGCACCCACCATGCAAGGTCTCGACCTCCAGGCCCCCGCATACGTCAAGAACGCCCGCCTGCTGGCCTGGGTGGC CGACATGGCCGCCCTCTGCAAGCCCGCCAGGATCCATTGGTGCGACGGCTCGCAGGAAGAGTACGACCGCCTCTGCCAGC AACTGGTGGATGCCGGCACCTTCAAGAAGCTCAATCCCGCCAAGCGCCCCGGCAGCTACCTGGCCTGGTCCGACCCGTCG GACGTGGCCCGCGTGGAAGACCGCACCTACATCTGCTGCGAGAAGAAGGAAGACGCCGGCCCGACCAACAACTGGATGGC CCCGGCCGAGATGCGCGCCACGCTGCAGCCGCTGTTCGACGGCTGCATGGCCGGCCGCACGATGTACGTCGTGCCCTTCA GCATGGGCCCGCTGGGCTCGCCCATCGCCCACATCGGCATCGAACTCTCCGACAGCCCCTACGTGGCCGTCAACATGAAG ATCATGACCCGCATGGGCCGTGCCGTGTACGACGTGCTGGGCGTGGAAGGCGACTTCGTGCCCTGCGTGCACACCGTGGG CGCGCCCCTGCAGCCCGGCCAGCAGGACGTGTCCTGGCCCTGCAACAAGACCAAGTACATCGTGCATTACCCCGAGACGC GCGAGATCTGGTCGTACGGCTCCGGCTACGGCGGCAACGCGCTGCTGGGCAAGAAGTGCTTCGCGCTGCGCATCGCCTCC ACCATGGGCCGTGACCAGGGCTGGCTGGCCGAGCACATGCTGATCCTGGGCGTTTCCAGCCCCGAAGGCAAGAAGTACCA CGTGGCCGCTGCATTCCCCAGCGCCTGCGGCAAGACCAACTTCTCCATGCTGGTGCCCCCGAAGGCCTTCGAAGGCTGGA AGGTCACCACGATCGGCGACGACATCGCCTGGATCAAGCCCCAGGCCGACGGCAGCCTGCGCGCCATCAACCCCGAAGCC GGCTACTTCGGCGTGGCCCCGGGCACCAACTACCACACCAACCCCAACTGCATGGCCAGCCTCGACCGTGACGTGATCTT CACGAACGTCGCGCTGACCGACGACGGCGACGTGTGGTGGGAAGGCATGGAAAAGGACACCGGCAAGCTGCCGGACCACC TGATCGACTGGCAGGGCAAGGACTGGACGCCCCAGATCGCCAAGGAAACCGGCGCCAAGGCCGCCCACCCCAACGCCCGC TTCACCGTGGCCGCCACCAACAACCCCGCGCTGGACCAAGCCTGGGACGATCCCAAGGGCGTGAAGATCGACGCCTTCAT CTTCGGCGGCCGCCGCTCCACCACCGTGCCGCTGGTGACCGAGGCGCGCGACTGGACCGAGGGCGTGTACATGGCCGCCA CCATGGGCTCCGAAACCACCGCCGCCGCCTTCGGCGCGCAGGGCGTGGTGCGCCGCGACCCGTTCGCCATGCTGCCCTTC ATGGGCTACAACATGAGCGACTACTTCCAGCACTGGCTCAACCTGGGCGAGAAGCTCTCCGCCTCGGGCGCCACTCTGCC GCGCATCTACACGACCAACTGGTTCCGCAAGGATGCCGAAGGCAAGTTCGTCTGGCCCGGCTACGGCGAGAACATGCGCG TGCTCAAGTGGATGATCGACCGCATCGAAGGCCGCGCCACCGGCCAGGAAACCGCCTTCGGCGTGGCGCCGCAATACGGC GAGATCAACTGGACGGGCCTGGACTTCTCGAGCGAGCAGTTCGACACCGTGACCCGCATCGACAAGGCCGCCTGGGCCGA AGAGCTGAAGCTGCACACGGCGCATTTCGACCAACTCGCCTACCATCTCCCGGAGCAGATGCTCAAGACCAAGGCAGCGC TGGAAAAGCGCCTGGCGGCCTGA
Upstream 100 bases:
>100_bases AAGACGTTTTCTCAAAGACAGCGCTCAGGATCCAGCGCGGCCTTGCCGCATCCCGTCCGCTTCCTTTGAAAAACCGTTTT TCAACTTCAGGAAGCCCGCG
Downstream 100 bases:
>100_bases TTTCCTCGCGGCCCCGGCTCGCCCGCCACGTGCGGACAATTGTCCGCCAGCCCAGCGAAAGCCCCGCGCCACGCCCGTGG CCGGGGCTTTTTGCTGGCTG
Product: phosphoenolpyruvate carboxykinase
Products: NA
Alternate protein names: PEP carboxykinase; PEPCK; Phosphoenolpyruvate carboxylase [H]
Number of amino acids: Translated: 620; Mature: 620
Protein sequence:
>620_residues MNAPTMQGLDLQAPAYVKNARLLAWVADMAALCKPARIHWCDGSQEEYDRLCQQLVDAGTFKKLNPAKRPGSYLAWSDPS DVARVEDRTYICCEKKEDAGPTNNWMAPAEMRATLQPLFDGCMAGRTMYVVPFSMGPLGSPIAHIGIELSDSPYVAVNMK IMTRMGRAVYDVLGVEGDFVPCVHTVGAPLQPGQQDVSWPCNKTKYIVHYPETREIWSYGSGYGGNALLGKKCFALRIAS TMGRDQGWLAEHMLILGVSSPEGKKYHVAAAFPSACGKTNFSMLVPPKAFEGWKVTTIGDDIAWIKPQADGSLRAINPEA GYFGVAPGTNYHTNPNCMASLDRDVIFTNVALTDDGDVWWEGMEKDTGKLPDHLIDWQGKDWTPQIAKETGAKAAHPNAR FTVAATNNPALDQAWDDPKGVKIDAFIFGGRRSTTVPLVTEARDWTEGVYMAATMGSETTAAAFGAQGVVRRDPFAMLPF MGYNMSDYFQHWLNLGEKLSASGATLPRIYTTNWFRKDAEGKFVWPGYGENMRVLKWMIDRIEGRATGQETAFGVAPQYG EINWTGLDFSSEQFDTVTRIDKAAWAEELKLHTAHFDQLAYHLPEQMLKTKAALEKRLAA
Sequences:
>Translated_620_residues MNAPTMQGLDLQAPAYVKNARLLAWVADMAALCKPARIHWCDGSQEEYDRLCQQLVDAGTFKKLNPAKRPGSYLAWSDPS DVARVEDRTYICCEKKEDAGPTNNWMAPAEMRATLQPLFDGCMAGRTMYVVPFSMGPLGSPIAHIGIELSDSPYVAVNMK IMTRMGRAVYDVLGVEGDFVPCVHTVGAPLQPGQQDVSWPCNKTKYIVHYPETREIWSYGSGYGGNALLGKKCFALRIAS TMGRDQGWLAEHMLILGVSSPEGKKYHVAAAFPSACGKTNFSMLVPPKAFEGWKVTTIGDDIAWIKPQADGSLRAINPEA GYFGVAPGTNYHTNPNCMASLDRDVIFTNVALTDDGDVWWEGMEKDTGKLPDHLIDWQGKDWTPQIAKETGAKAAHPNAR FTVAATNNPALDQAWDDPKGVKIDAFIFGGRRSTTVPLVTEARDWTEGVYMAATMGSETTAAAFGAQGVVRRDPFAMLPF MGYNMSDYFQHWLNLGEKLSASGATLPRIYTTNWFRKDAEGKFVWPGYGENMRVLKWMIDRIEGRATGQETAFGVAPQYG EINWTGLDFSSEQFDTVTRIDKAAWAEELKLHTAHFDQLAYHLPEQMLKTKAALEKRLAA >Mature_620_residues MNAPTMQGLDLQAPAYVKNARLLAWVADMAALCKPARIHWCDGSQEEYDRLCQQLVDAGTFKKLNPAKRPGSYLAWSDPS DVARVEDRTYICCEKKEDAGPTNNWMAPAEMRATLQPLFDGCMAGRTMYVVPFSMGPLGSPIAHIGIELSDSPYVAVNMK IMTRMGRAVYDVLGVEGDFVPCVHTVGAPLQPGQQDVSWPCNKTKYIVHYPETREIWSYGSGYGGNALLGKKCFALRIAS TMGRDQGWLAEHMLILGVSSPEGKKYHVAAAFPSACGKTNFSMLVPPKAFEGWKVTTIGDDIAWIKPQADGSLRAINPEA GYFGVAPGTNYHTNPNCMASLDRDVIFTNVALTDDGDVWWEGMEKDTGKLPDHLIDWQGKDWTPQIAKETGAKAAHPNAR FTVAATNNPALDQAWDDPKGVKIDAFIFGGRRSTTVPLVTEARDWTEGVYMAATMGSETTAAAFGAQGVVRRDPFAMLPF MGYNMSDYFQHWLNLGEKLSASGATLPRIYTTNWFRKDAEGKFVWPGYGENMRVLKWMIDRIEGRATGQETAFGVAPQYG EINWTGLDFSSEQFDTVTRIDKAAWAEELKLHTAHFDQLAYHLPEQMLKTKAALEKRLAA
Specific function: Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle [H]
COG id: COG1274
COG function: function code C; Phosphoenolpyruvate carboxykinase (GTP)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoenolpyruvate carboxykinase [GTP] family [H]
Homologues:
Organism=Homo sapiens, GI187281517, Length=631, Percent_Identity=46.7511885895404, Blast_Score=577, Evalue=1e-164, Organism=Homo sapiens, GI66346721, Length=610, Percent_Identity=48.8524590163934, Blast_Score=571, Evalue=1e-163, Organism=Homo sapiens, GI66346723, Length=381, Percent_Identity=52.49343832021, Blast_Score=386, Evalue=1e-107, Organism=Caenorhabditis elegans, GI71989645, Length=622, Percent_Identity=45.4983922829582, Blast_Score=541, Evalue=1e-154, Organism=Caenorhabditis elegans, GI71989658, Length=622, Percent_Identity=45.4983922829582, Blast_Score=541, Evalue=1e-154, Organism=Caenorhabditis elegans, GI17555492, Length=625, Percent_Identity=47.36, Blast_Score=541, Evalue=1e-154, Organism=Caenorhabditis elegans, GI71989653, Length=599, Percent_Identity=46.4106844741235, Blast_Score=532, Evalue=1e-151, Organism=Caenorhabditis elegans, GI32564411, Length=558, Percent_Identity=49.1039426523297, Blast_Score=520, Evalue=1e-148, Organism=Caenorhabditis elegans, GI32564407, Length=552, Percent_Identity=48.3695652173913, Blast_Score=492, Evalue=1e-139, Organism=Caenorhabditis elegans, GI71989649, Length=555, Percent_Identity=45.2252252252252, Blast_Score=473, Evalue=1e-133, Organism=Caenorhabditis elegans, GI32564409, Length=378, Percent_Identity=45.5026455026455, Blast_Score=302, Evalue=3e-82, Organism=Caenorhabditis elegans, GI17540956, Length=551, Percent_Identity=25.2268602540835, Blast_Score=171, Evalue=7e-43, Organism=Drosophila melanogaster, GI24655085, Length=607, Percent_Identity=49.0939044481054, Blast_Score=588, Evalue=1e-168, Organism=Drosophila melanogaster, GI24655082, Length=607, Percent_Identity=48.1054365733114, Blast_Score=568, Evalue=1e-162, Organism=Drosophila melanogaster, GI161077226, Length=564, Percent_Identity=49.290780141844, Blast_Score=544, Evalue=1e-155, Organism=Drosophila melanogaster, GI24655088, Length=511, Percent_Identity=50.6849315068493, Blast_Score=514, Evalue=1e-146,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018091 - InterPro: IPR013035 - InterPro: IPR008209 - InterPro: IPR008210 [H]
Pfam domain/function: PF00821 PEPCK [H]
EC number: =4.1.1.32 [H]
Molecular weight: Translated: 68534; Mature: 68534
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: PS00505 PEPCK_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPTMQGLDLQAPAYVKNARLLAWVADMAALCKPARIHWCDGSQEEYDRLCQQLVDAGT CCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCC FKKLNPAKRPGSYLAWSDPSDVARVEDRTYICCEKKEDAGPTNNWMAPAEMRATLQPLFD CCCCCCCCCCCCEEEECCCCHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH GCMAGRTMYVVPFSMGPLGSPIAHIGIELSDSPYVAVNMKIMTRMGRAVYDVLGVEGDFV HHHCCCEEEEEEECCCCCCCCHHHEEEEECCCCEEEEEHHHHHHHHHHHHHHHCCCCCCC PCVHTVGAPLQPGQQDVSWPCNKTKYIVHYPETREIWSYGSGYGGNALLGKKCFALRIAS HHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHCCCCCCCCCCHHCCHHHHHHHHH TMGRDQGWLAEHMLILGVSSPEGKKYHVAAAFPSACGKTNFSMLVPPKAFEGWKVTTIGD HCCCCCCHHHEEEEEEEECCCCCCEEEEEEECCHHCCCCCCEEEECCCCCCCEEEEEECC DIAWIKPQADGSLRAINPEAGYFGVAPGTNYHTNPNCMASLDRDVIFTNVALTDDGDVWW CEEEECCCCCCCEEEECCCCCEEECCCCCCCCCCCCHHHHCCCCEEEEEEEEECCCCCEE EGMEKDTGKLPDHLIDWQGKDWTPQIAKETGAKAAHPNARFTVAATNNPALDQAWDDPKG CCCCCCCCCCCHHHHCCCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC VKIDAFIFGGRRSTTVPLVTEARDWTEGVYMAATMGSETTAAAFGAQGVVRRDPFAMLPF CEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCEECCC MGYNMSDYFQHWLNLGEKLSASGATLPRIYTTNWFRKDAEGKFVWPGYGENMRVLKWMID CCCCHHHHHHHHHCCCHHCCCCCCCCCEEEECCCEEECCCCCEECCCCCCCHHHHHHHHH RIEGRATGQETAFGVAPQYGEINWTGLDFSSEQFDTVTRIDKAAWAEELKLHTAHFDQLA HHCCCCCCCCCEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YHLPEQMLKTKAALEKRLAA HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNAPTMQGLDLQAPAYVKNARLLAWVADMAALCKPARIHWCDGSQEEYDRLCQQLVDAGT CCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCC FKKLNPAKRPGSYLAWSDPSDVARVEDRTYICCEKKEDAGPTNNWMAPAEMRATLQPLFD CCCCCCCCCCCCEEEECCCCHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH GCMAGRTMYVVPFSMGPLGSPIAHIGIELSDSPYVAVNMKIMTRMGRAVYDVLGVEGDFV HHHCCCEEEEEEECCCCCCCCHHHEEEEECCCCEEEEEHHHHHHHHHHHHHHHCCCCCCC PCVHTVGAPLQPGQQDVSWPCNKTKYIVHYPETREIWSYGSGYGGNALLGKKCFALRIAS HHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHCCCCCCCCCCHHCCHHHHHHHHH TMGRDQGWLAEHMLILGVSSPEGKKYHVAAAFPSACGKTNFSMLVPPKAFEGWKVTTIGD HCCCCCCHHHEEEEEEEECCCCCCEEEEEEECCHHCCCCCCEEEECCCCCCCEEEEEECC DIAWIKPQADGSLRAINPEAGYFGVAPGTNYHTNPNCMASLDRDVIFTNVALTDDGDVWW CEEEECCCCCCCEEEECCCCCEEECCCCCCCCCCCCHHHHCCCCEEEEEEEEECCCCCEE EGMEKDTGKLPDHLIDWQGKDWTPQIAKETGAKAAHPNARFTVAATNNPALDQAWDDPKG CCCCCCCCCCCHHHHCCCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC VKIDAFIFGGRRSTTVPLVTEARDWTEGVYMAATMGSETTAAAFGAQGVVRRDPFAMLPF CEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCEECCC MGYNMSDYFQHWLNLGEKLSASGATLPRIYTTNWFRKDAEGKFVWPGYGENMRVLKWMID CCCCHHHHHHHHHCCCHHCCCCCCCCCEEEECCCEEECCCCCEECCCCCCCHHHHHHHHH RIEGRATGQETAFGVAPQYGEINWTGLDFSSEQFDTVTRIDKAAWAEELKLHTAHFDQLA HHCCCCCCCCCEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YHLPEQMLKTKAALEKRLAA HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA