| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120608789
Identifier: 120608789
GI number: 120608789
Start: 85837
End: 86145
Strand: Reverse
Name: 120608789
Synonym: Aave_0079
Alternate gene names: NA
Gene position: 86145-85837 (Counterclockwise)
Preceding gene: 120608790
Following gene: 120608778
Centisome position: 1.61
GC content: 72.17
Gene sequence:
>309_bases ATGGCAACGCCCGGCCGGAGATTCCCTTTTCTCGCCCGCCATTGGTTCGGTGCGCTCTGCGCGCTCCTGGGTTTGGCGCC CTTGGTGCTCCTGCTGGCCTGGTGGCCGCTGGCCACGCTGCTGGAGTGCTCCGGCAACGAGGGCTCGGGCATGCACTGCG CCGCCGCGCCGGGGCTGTCCGACATGGCATATACGGTGTTCATGGCGGGCGCCTGGGGCTCGCTGTTCACGCTGCCGGCG GCGCTGTCGCTGTACCTGGTCGGGGCGGGCCTGCGCTGGCTGCTGGGGCGGCCCGGCGACTCGCGGTGA
Upstream 100 bases:
>100_bases GAGCGCGTCAATGTCCCGCTGTGGCTGGGCATCGGCGCCATCGCCGTGGGCGGGCTGCTGCTGGTGGTGGGCGGCCGGAA GTAAGGCCGTCCCGCATCCC
Downstream 100 bases:
>100_bases ATCGCCGCGACCGGCACCACGGAGACACCGGATGATGCGAGATGAGAACAGCCGCTGACCTGACGCCAGCGAGCATTGCT CTCACCATATTTTTCAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MATPGRRFPFLARHWFGALCALLGLAPLVLLLAWWPLATLLECSGNEGSGMHCAAAPGLSDMAYTVFMAGAWGSLFTLPA ALSLYLVGAGLRWLLGRPGDSR
Sequences:
>Translated_102_residues MATPGRRFPFLARHWFGALCALLGLAPLVLLLAWWPLATLLECSGNEGSGMHCAAAPGLSDMAYTVFMAGAWGSLFTLPA ALSLYLVGAGLRWLLGRPGDSR >Mature_101_residues ATPGRRFPFLARHWFGALCALLGLAPLVLLLAWWPLATLLECSGNEGSGMHCAAAPGLSDMAYTVFMAGAWGSLFTLPAA LSLYLVGAGLRWLLGRPGDSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10819; Mature: 10688
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPGRRFPFLARHWFGALCALLGLAPLVLLLAWWPLATLLECSGNEGSGMHCAAAPGLS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCC DMAYTVFMAGAWGSLFTLPAALSLYLVGAGLRWLLGRPGDSR HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ATPGRRFPFLARHWFGALCALLGLAPLVLLLAWWPLATLLECSGNEGSGMHCAAAPGLS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCC DMAYTVFMAGAWGSLFTLPAALSLYLVGAGLRWLLGRPGDSR HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA