| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120608737
Identifier: 120608737
GI number: 120608737
Start: 29239
End: 29802
Strand: Reverse
Name: 120608737
Synonym: Aave_0024
Alternate gene names: NA
Gene position: 29802-29239 (Counterclockwise)
Preceding gene: 120608740
Following gene: 120608736
Centisome position: 0.56
GC content: 72.87
Gene sequence:
>564_bases ATGAAAGGACATCGCCATGACCGCACTTTTCCTGCAACGACGCTTCGCCACCGCAGCCACGGCCGCCGCACTGACGGCCC TGCTGGCGGCTCCGTCCTTCGCGCAGCAGCCCGCCACGCCGGCCGCGTCCCCCACGGCCGGCGCCGAACGCCCGCACCGC ATGCCCGCCCCCGGGGAACGCGAAGCCCGCATGGCCCACGTGCAGAGGCCCTCCGGCAGAAGCTGCAGCTCACGCCGGCC CAGCAACCGGCATGGGACGCCTTCACCGCGGCCATGCGCCCGCAGGGCCCGCGCCCGGACATGGCCGGAATGGCACAGCT GACCACGCCGGAACGCATCGACCGCATGCGGGCACTGCGCGCCCAGCACAACGCCGAAGCGGACCGCCGGGACGACGCCA CGAAAACCTTCTATGCCGCGCTCACCCCGGCACAGCAAAAGGTGTTCGACGCCGAACACGTCGGCATGCACGGCCCCCGC CACAAGGGGATGCACGGCGACAACGGGCCTGCCCGCCGGCACGGCGGCACGGCACCGGCCCCTGCGGCTCCGGCACCACA GTAA
Upstream 100 bases:
>100_bases CCACACGCCCCCCTCATGGCGGGGATACACGGGCGGCCGACACTGGCTTCCAACCGCCGCACCGCACCGGTCGCGGCGGC AACGCCCCCCCGAAGGGGAC
Downstream 100 bases:
>100_bases TGCGGGTCCGCCGCGCATGCGGCGGCCACCTACAGCGGGCCTCCCAGCCCCTGTCCTACAGTGGGTTACGTCGATTGTGT AACCTTACGGTTGCGACATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MKGHRHDRTFPATTLRHRSHGRRTDGPAGGSVLRAAARHAGRVPHGRRRTPAPHARPRGTRSPHGPRAEALRQKLQLTPA QQPAWDAFTAAMRPQGPRPDMAGMAQLTTPERIDRMRALRAQHNAEADRRDDATKTFYAALTPAQQKVFDAEHVGMHGPR HKGMHGDNGPARRHGGTAPAPAAPAPQ
Sequences:
>Translated_187_residues MKGHRHDRTFPATTLRHRSHGRRTDGPAGGSVLRAAARHAGRVPHGRRRTPAPHARPRGTRSPHGPRAEALRQKLQLTPA QQPAWDAFTAAMRPQGPRPDMAGMAQLTTPERIDRMRALRAQHNAEADRRDDATKTFYAALTPAQQKVFDAEHVGMHGPR HKGMHGDNGPARRHGGTAPAPAAPAPQ >Mature_187_residues MKGHRHDRTFPATTLRHRSHGRRTDGPAGGSVLRAAARHAGRVPHGRRRTPAPHARPRGTRSPHGPRAEALRQKLQLTPA QQPAWDAFTAAMRPQGPRPDMAGMAQLTTPERIDRMRALRAQHNAEADRRDDATKTFYAALTPAQQKVFDAEHVGMHGPR HKGMHGDNGPARRHGGTAPAPAAPAPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20418; Mature: 20418
Theoretical pI: Translated: 12.38; Mature: 12.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGHRHDRTFPATTLRHRSHGRRTDGPAGGSVLRAAARHAGRVPHGRRRTPAPHARPRGT CCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC RSPHGPRAEALRQKLQLTPAQQPAWDAFTAAMRPQGPRPDMAGMAQLTTPERIDRMRALR CCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHCHHHCCCHHHHHHHHHHH AQHNAEADRRDDATKTFYAALTPAQQKVFDAEHVGMHGPRHKGMHGDNGPARRHGGTAPA HHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PAAPAPQ CCCCCCC >Mature Secondary Structure MKGHRHDRTFPATTLRHRSHGRRTDGPAGGSVLRAAARHAGRVPHGRRRTPAPHARPRGT CCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC RSPHGPRAEALRQKLQLTPAQQPAWDAFTAAMRPQGPRPDMAGMAQLTTPERIDRMRALR CCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHCHHHCCCHHHHHHHHHHH AQHNAEADRRDDATKTFYAALTPAQQKVFDAEHVGMHGPRHKGMHGDNGPARRHGGTAPA HHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PAAPAPQ CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA