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The map label for this gene is ptsJ [H]

Identifier: 120608730

GI number: 120608730

Start: 16785

End: 18113

Strand: Reverse

Name: ptsJ [H]

Synonym: Aave_0017

Alternate gene names: 120608730

Gene position: 18113-16785 (Counterclockwise)

Preceding gene: 120608731

Following gene: 120608725

Centisome position: 0.34

GC content: 74.64

Gene sequence:

>1329_bases
ATGAAGACAATGAATTTCGATGGATCGTCGGCGGCGGAAATCGCGGACAGCATCGAATCCCATCTGCGCTCCGGGGCGCT
TTCGTGCGGGGATGCGCTGCCGGCCGTGCGTGCGCTGGCCTCGCAGCTGGGCGTCAATCCGAATACCGTGGCCGCTGCCT
ATGCGCGCCTGCGCGATGCCGGCCGGCTGGTGACCGACGGCCGTCGCGGCACGCGCGTGGCCTCGGCCCGGCCCCCGGTG
GCCGAGGCAATGGCGCTGCCCGCCGGCCTGCGCGATCTCGCTGGCGGCCACGGGGACCGCGCCCTTCTTCCGCGGCTCCC
CTCCGGCGGCTGGCAGGGTGTGCAGCTGGACGCGGGCTCCGGCCATGGTGGGCCCGCCGAGGTCCCCCTCTGGCGCGAGA
TGGCGCTGCAGTGGCTGGGCAGCCAGGGGCTGCCCCACGAGGCCACGGGCGTGTTTTCGGGCACGCTGGATGCCGTGGAA
GCCGCATTGCGCCACCACGCGCGCCCTGGCGACCGCGTCGCGGTCGAAGATCCCTGCTGGCCCCCGATGGTCGCGCTGCT
GCACGCACTGCGGCTGAAGGCGGTGCCCCTGCCGGTGGATGCGCAGGGCGTGCAGGTGCCGTCTGCCGAATGCCTGGACG
GCTGCGCCGCGCTGGTGCTCACGCCGCGCGCCCACAACCCCACCGGCTGTGCGATCTCCGAACCGCGGTGGAAGGCCCTG
CGCCGTGCCCTGCACGGCCGCCCCCACCTGCTGTGCATCCTGGACGACCACTGGGGGCCGCTCAGCCAGGAACCGCTGGC
TCCGGCGGCCGCACTGCCCCCGCTCTGGCTCTACGTCCTCTCCGTGGGCAAGTTCCTCGGGCCGGACGTGCGCGTGGCGC
TCGCGGCCGGCACGCCGGCGCTCATCGATGCCCTGCGTGCCCAGCAGGCTGCGGGTGCGCGATGGGTCAGCCGGCTGCTC
CAGGCGCTGGCCGCCGGGCTCTGGCGGGATGCCCTGCGTTCAGGTCAGCTCGCCCAGGCGGCCCAGGCCTATGCGCGGCG
GCGGCAGGCGCTGGAGTTCGCCCTGCGGTCGCAACCGTCGGATCCGGTGGCCACCGGAGCCACGGCCGGCGAGGGCCTGC
ATCTGTGGGTTCCGGTGCGTGACGAAAGCGCCGTGCTGTCCGCGCTGGCCGCCCGGGGCTGGGCGGCCCAGGCAGGGGCG
CCTTTCCGCATCGCCAGCGGCCCGGCGGTACGCATCAGCCTGGGCGATCTCGCGGGGCCGGAAGTCGGGCCCCTGGCACG
CGATCTGGCCGATGCCCTCGCGCCCGCCGCGGCCAGGGCGGTGTTCTGA

Upstream 100 bases:

>100_bases
TTCCCCGAGCTCTGCGAGGTGAAGTGGAACCCGTCTTCGCACCGGTCGAATCGCTGTATGCATACAAATGGGATTTGTAC
TAGTACATTAAAATGAATGT

Downstream 100 bases:

>100_bases
CTGGACGGTGCCGTGCGGGAGCTGGCTCGGGCTTTCAGGGCAGCGGGGCTGCCGGCTCGCAGTGGGCAGCGTCCCGCCAC
AGGTCTTCGCCCATGGCATG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MKTMNFDGSSAAEIADSIESHLRSGALSCGDALPAVRALASQLGVNPNTVAAAYARLRDAGRLVTDGRRGTRVASARPPV
AEAMALPAGLRDLAGGHGDRALLPRLPSGGWQGVQLDAGSGHGGPAEVPLWREMALQWLGSQGLPHEATGVFSGTLDAVE
AALRHHARPGDRVAVEDPCWPPMVALLHALRLKAVPLPVDAQGVQVPSAECLDGCAALVLTPRAHNPTGCAISEPRWKAL
RRALHGRPHLLCILDDHWGPLSQEPLAPAAALPPLWLYVLSVGKFLGPDVRVALAAGTPALIDALRAQQAAGARWVSRLL
QALAAGLWRDALRSGQLAQAAQAYARRRQALEFALRSQPSDPVATGATAGEGLHLWVPVRDESAVLSALAARGWAAQAGA
PFRIASGPAVRISLGDLAGPEVGPLARDLADALAPAAARAVF

Sequences:

>Translated_442_residues
MKTMNFDGSSAAEIADSIESHLRSGALSCGDALPAVRALASQLGVNPNTVAAAYARLRDAGRLVTDGRRGTRVASARPPV
AEAMALPAGLRDLAGGHGDRALLPRLPSGGWQGVQLDAGSGHGGPAEVPLWREMALQWLGSQGLPHEATGVFSGTLDAVE
AALRHHARPGDRVAVEDPCWPPMVALLHALRLKAVPLPVDAQGVQVPSAECLDGCAALVLTPRAHNPTGCAISEPRWKAL
RRALHGRPHLLCILDDHWGPLSQEPLAPAAALPPLWLYVLSVGKFLGPDVRVALAAGTPALIDALRAQQAAGARWVSRLL
QALAAGLWRDALRSGQLAQAAQAYARRRQALEFALRSQPSDPVATGATAGEGLHLWVPVRDESAVLSALAARGWAAQAGA
PFRIASGPAVRISLGDLAGPEVGPLARDLADALAPAAARAVF
>Mature_442_residues
MKTMNFDGSSAAEIADSIESHLRSGALSCGDALPAVRALASQLGVNPNTVAAAYARLRDAGRLVTDGRRGTRVASARPPV
AEAMALPAGLRDLAGGHGDRALLPRLPSGGWQGVQLDAGSGHGGPAEVPLWREMALQWLGSQGLPHEATGVFSGTLDAVE
AALRHHARPGDRVAVEDPCWPPMVALLHALRLKAVPLPVDAQGVQVPSAECLDGCAALVLTPRAHNPTGCAISEPRWKAL
RRALHGRPHLLCILDDHWGPLSQEPLAPAAALPPLWLYVLSVGKFLGPDVRVALAAGTPALIDALRAQQAAGARWVSRLL
QALAAGLWRDALRSGQLAQAAQAYARRRQALEFALRSQPSDPVATGATAGEGLHLWVPVRDESAVLSALAARGWAAQAGA
PFRIASGPAVRISLGDLAGPEVGPLARDLADALAPAAARAVF

Specific function: Putative transcriptional regulator of the ptsHI/crr operon [H]

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR000524
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00155 Aminotran_1_2; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 45917; Mature: 45917

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTMNFDGSSAAEIADSIESHLRSGALSCGDALPAVRALASQLGVNPNTVAAAYARLRDA
CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
GRLVTDGRRGTRVASARPPVAEAMALPAGLRDLAGGHGDRALLPRLPSGGWQGVQLDAGS
CCEEECCCCCCCCCCCCCCHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEECCC
GHGGPAEVPLWREMALQWLGSQGLPHEATGVFSGTLDAVEAALRHHARPGDRVAVEDPCW
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC
PPMVALLHALRLKAVPLPVDAQGVQVPSAECLDGCAALVLTPRAHNPTGCAISEPRWKAL
CHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHH
RRALHGRPHLLCILDDHWGPLSQEPLAPAAALPPLWLYVLSVGKFLGPDVRVALAAGTPA
HHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHH
LIDALRAQQAAGARWVSRLLQALAAGLWRDALRSGQLAQAAQAYARRRQALEFALRSQPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
DPVATGATAGEGLHLWVPVRDESAVLSALAARGWAAQAGAPFRIASGPAVRISLGDLAGP
CCCCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCHHCCCCCEEECCCCEEEEEECCCCCC
EVGPLARDLADALAPAAARAVF
CCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTMNFDGSSAAEIADSIESHLRSGALSCGDALPAVRALASQLGVNPNTVAAAYARLRDA
CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
GRLVTDGRRGTRVASARPPVAEAMALPAGLRDLAGGHGDRALLPRLPSGGWQGVQLDAGS
CCEEECCCCCCCCCCCCCCHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEECCC
GHGGPAEVPLWREMALQWLGSQGLPHEATGVFSGTLDAVEAALRHHARPGDRVAVEDPCW
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC
PPMVALLHALRLKAVPLPVDAQGVQVPSAECLDGCAALVLTPRAHNPTGCAISEPRWKAL
CHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHH
RRALHGRPHLLCILDDHWGPLSQEPLAPAAALPPLWLYVLSVGKFLGPDVRVALAAGTPA
HHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHH
LIDALRAQQAAGARWVSRLLQALAAGLWRDALRSGQLAQAAQAYARRRQALEFALRSQPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
DPVATGATAGEGLHLWVPVRDESAVLSALAARGWAAQAGAPFRIASGPAVRISLGDLAGP
CCCCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCHHCCCCCEEECCCCEEEEEECCCCCC
EVGPLARDLADALAPAAARAVF
CCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7612925; 11677609 [H]