| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120599312
Identifier: 120599312
GI number: 120599312
Start: 2873281
End: 2873703
Strand: Direct
Name: 120599312
Synonym: Sputw3181_2508
Alternate gene names: NA
Gene position: 2873281-2873703 (Clockwise)
Preceding gene: 120599311
Following gene: 120599313
Centisome position: 61.02
GC content: 39.95
Gene sequence:
>423_bases ATGAGAATGATCACTATTTCACTAGTACTGTTTATGCTCGGCGGCTGCGCCACTTCATCAGTTAGCTACGATAAAGCCAA AAATGTTCCTGAAGATAGAGTGGCGCTAAAAACGCAAGGGAAATACTCATTTACCGTTATCAGAGATAGTGGATGGACTG GTAGCGGCTGCTATGCAGACCTTTATATTGATGAACAACTTGCTGCCAAATTCGAGTCAGGTGAAAAGTCAACTTTTAGA ACAGATGATAATAGAGTCATGCTTAAAGTGACTAACTCAGGTGCGGCACTGTGCTCTTTTGATGGTGGCACAAATCACTA TGAAGCCTTTCTTGAATTAGATAAGCATAAAATATACAGAATTCATGTTAACTATGATGGTGCAGGTCTGCAAATATTAG CTGGCGGTACTTATAAAGACTAA
Upstream 100 bases:
>100_bases CTACCAATAAATGGGAATTGTAAAATTATTGGTGTTGTTGTGGATGCTAAAATTAAGATTTTCTAGCTAGTTATAATTTT AATGATAATGGATTATTACC
Downstream 100 bases:
>100_bases AGGAATAGTAAAATGGATAAAGAAACCGCAGAGTTTTTAGCAAAACACCCCTACATCCCTACCAAATTTATCGCATTAGA TGCCGAGACCACGGGGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MRMITISLVLFMLGGCATSSVSYDKAKNVPEDRVALKTQGKYSFTVIRDSGWTGSGCYADLYIDEQLAAKFESGEKSTFR TDDNRVMLKVTNSGAALCSFDGGTNHYEAFLELDKHKIYRIHVNYDGAGLQILAGGTYKD
Sequences:
>Translated_140_residues MRMITISLVLFMLGGCATSSVSYDKAKNVPEDRVALKTQGKYSFTVIRDSGWTGSGCYADLYIDEQLAAKFESGEKSTFR TDDNRVMLKVTNSGAALCSFDGGTNHYEAFLELDKHKIYRIHVNYDGAGLQILAGGTYKD >Mature_140_residues MRMITISLVLFMLGGCATSSVSYDKAKNVPEDRVALKTQGKYSFTVIRDSGWTGSGCYADLYIDEQLAAKFESGEKSTFR TDDNRVMLKVTNSGAALCSFDGGTNHYEAFLELDKHKIYRIHVNYDGAGLQILAGGTYKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15443; Mature: 15443
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMITISLVLFMLGGCATSSVSYDKAKNVPEDRVALKTQGKYSFTVIRDSGWTGSGCYAD CEEEEHHHHHHHHCCCCCCCCCCHHHCCCCCHHEEEEECCCEEEEEEECCCCCCCCEEEE LYIDEQLAAKFESGEKSTFRTDDNRVMLKVTNSGAALCSFDGGTNHYEAFLELDKHKIYR EEECHHHHHHCCCCCCCEEEECCCEEEEEECCCCEEEEEECCCCCCEEEEEEECCCEEEE IHVNYDGAGLQILAGGTYKD EEEEECCCCEEEEECCCCCC >Mature Secondary Structure MRMITISLVLFMLGGCATSSVSYDKAKNVPEDRVALKTQGKYSFTVIRDSGWTGSGCYAD CEEEEHHHHHHHHCCCCCCCCCCHHHCCCCCHHEEEEECCCEEEEEEECCCCCCCCEEEE LYIDEQLAAKFESGEKSTFRTDDNRVMLKVTNSGAALCSFDGGTNHYEAFLELDKHKIYR EEECHHHHHHCCCCCCCEEEECCCEEEEEECCCCEEEEEECCCCCCEEEEEEECCCEEEE IHVNYDGAGLQILAGGTYKD EEEEECCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA