| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120599264
Identifier: 120599264
GI number: 120599264
Start: 2841911
End: 2842402
Strand: Direct
Name: 120599264
Synonym: Sputw3181_2460
Alternate gene names: NA
Gene position: 2841911-2842402 (Clockwise)
Preceding gene: 120599257
Following gene: 120599311
Centisome position: 60.36
GC content: 37.4
Gene sequence:
>492_bases ATGACGAAAAAAAATTTCCCTAGTGATACCTTAGATAAGTTTATGTTGCGCTTCCCTAGTGGTATGCGTGAGCAAATTAA AGAGGAATCCAACAAAAACGGTCGTTCAATGAACGCTGAAATCGTGCATCGATTAGAGGTGAGCTTTATTGCTGACCAAA ATTCATCGGCAGCAAACATGCTGCACGGAGATGGAATTGAAAACCTTTTAACACCAACATTGCCAGCATCAATAGCAGGG AAAATAGCCAAAAACAATGCAGACTCAGGTATTGCATTGGCATCATTATTTGTTGATGAAATTAACGAACTTATCAATGG CGCAGTAGTAGTTGGTAAGCGAAAAATTGAACTTGATACAAAAAAGTTAACCTGCTCAATGCCAGTGACGGATGCTGAGA TATTTAGCGCTTTAAAATTGGTTGAAAAGACTTTTGATGATGCGGGTTATCTTGTAAAAATTAACGATGGCAACATTATA ATTTCATTTTAG
Upstream 100 bases:
>100_bases TATAGTGTCGACTCGACACTATAAATTTAACTGCTAGCACCAAGTATGTCAACTCGACACTATTCTTTTTGTGTCGAGTT GACGCTATGCTATTAGAATC
Downstream 100 bases:
>100_bases TTTTAAGATAGGCCACTTTTTGGTGGCCTATTTAGCAACTATTGAGACATGATTACTTCGGCAGTCTCACCATCTTGAAG GTAAACCCTTTTCAGCAATA
Product: Arc domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MTKKNFPSDTLDKFMLRFPSGMREQIKEESNKNGRSMNAEIVHRLEVSFIADQNSSAANMLHGDGIENLLTPTLPASIAG KIAKNNADSGIALASLFVDEINELINGAVVVGKRKIELDTKKLTCSMPVTDAEIFSALKLVEKTFDDAGYLVKINDGNII ISF
Sequences:
>Translated_163_residues MTKKNFPSDTLDKFMLRFPSGMREQIKEESNKNGRSMNAEIVHRLEVSFIADQNSSAANMLHGDGIENLLTPTLPASIAG KIAKNNADSGIALASLFVDEINELINGAVVVGKRKIELDTKKLTCSMPVTDAEIFSALKLVEKTFDDAGYLVKINDGNII ISF >Mature_162_residues TKKNFPSDTLDKFMLRFPSGMREQIKEESNKNGRSMNAEIVHRLEVSFIADQNSSAANMLHGDGIENLLTPTLPASIAGK IAKNNADSGIALASLFVDEINELINGAVVVGKRKIELDTKKLTCSMPVTDAEIFSALKLVEKTFDDAGYLVKINDGNIII SF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17804; Mature: 17672
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKNFPSDTLDKFMLRFPSGMREQIKEESNKNGRSMNAEIVHRLEVSFIADQNSSAANM CCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHEEEECCCCCHHHH LHGDGIENLLTPTLPASIAGKIAKNNADSGIALASLFVDEINELINGAVVVGKRKIELDT HCCCCHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEECCEEEEEEC KKLTCSMPVTDAEIFSALKLVEKTFDDAGYLVKINDGNIIISF CEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEC >Mature Secondary Structure TKKNFPSDTLDKFMLRFPSGMREQIKEESNKNGRSMNAEIVHRLEVSFIADQNSSAANM CCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHEEEECCCCCHHHH LHGDGIENLLTPTLPASIAGKIAKNNADSGIALASLFVDEINELINGAVVVGKRKIELDT HCCCCHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEECCEEEEEEC KKLTCSMPVTDAEIFSALKLVEKTFDDAGYLVKINDGNIIISF CEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA