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The map label for this gene is ycbZ [C]

Identifier: 120599191

GI number: 120599191

Start: 2751736

End: 2753469

Strand: Direct

Name: ycbZ [C]

Synonym: Sputw3181_2387

Alternate gene names: 120599191

Gene position: 2751736-2753469 (Clockwise)

Preceding gene: 120599187

Following gene: 120599192

Centisome position: 58.44

GC content: 43.19

Gene sequence:

>1734_bases
ATGAATTCACTCTTGATATCGACTTCTTCACTCGCACCTGAATTTAGCCTCCCCTCCCTATCTCAGTCGGCTGCCAATTT
AAGCGCCTTACTCTTAGGGCAAGAGCGTGCTGTAGATGCGTTTAAACTGCACAATGCCATAGCAGAACAACAACTCTATC
TTGCCGATTTTCCCGGTATTGATCGCCATTTAATGATACGTGCGCTGATGGATACCTTGACTCCTATATCCACGGCTTAT
CTTGTTGCAACTCGGCCTGTAGATGAAGCGATACAATTTCAATGGCAACACGAGCAACCATTAGACAACCAAGGTTGCAT
TGCAGAAAAGAATGTCCTTTATCGTTATTTAAGCGGCAATATTCGACGAGTCGATTTACTCGGAAGAATGGTGCAATCGG
GTAATAGCAGTAAATACCAAGCAGGTGCGCTCGCACAATGTCATTATCTGTTTATTTGCGCAGAATCATTGTGGAAACGT
GAGAACTTGTGGGATTTAGTCATGCAAATCCTCACACAAAAAGAGTATCAAATTAGCAGTACCTTAAGCCCAGTACCATT
AAATTGTAAAATAGTGCTAGTGGGCGCAGGGATGATTTATAGTCAAGTGCGCTCTGAGGATTGGCAATTTCAGCGTCATT
TTACCCTCTTAGCAGAACTCGCCAGTGAAATAGACCTAATGCGCTATAAAGAATCACAATACGCAGCATGGTTACAAACT
GTAGCGCAAAGTGTCGATGTAACATTAGAACAGTCAAGTCTGGCGCCACTATTTCGTTACAGCGCACGCTTAACAGAACA
TCAACGTCGTCTAAGTTTATCTATGCTCGATTTTGCTCAGTTGATGGCACAAGCTAAAGCCTACCGTGGCAAACCTAGCA
TCAATGCTAGCGACATTGAATATGCCCTGTCCCAAGCTAATTATCGTCATAACAGCTCCGAAGAATTTTCAGGTCAGAGT
TTTGATGACAATTTCATAAATCTGCCAACAACAGGGGCTATGGTAGGACAGATAAACGGCCTAACCGTGATTGATGCGAT
TGATTATAGTTATGGTGAACCCGCACGCATCACCGCATCGGTACACTATGGGGATGGTGAGGTTGCAGATATTGAAAGAA
AATCTGAACTTGGTGGGAATATTCATGCCAAAGGGATGATGATCCTATCGGCCTGCTTATACCGCATCTTCGGTAGAGAT
GCACCATTACACCTCAATGCCAATATTGTATTTGAGCAATCATACCAAGAAATCGATGGTGATAGTGCGTCGCTAGCGGA
ATATTGCTGCCTTATGTCGGCGATTGCAGAGCAGCCCATTATTCAATCTTTAGCCATCACTGGAGCACTCGATCAATTCG
GTAATGTACAAGCTATTGGTGGCATTAACGAAAAAATTGAAGGCTTTTTTAATTTATGTGAACGGCGAGGCTTAACGGGT
GAGCAAGGCGTGATTATGCCTAGATCGAATATTTTACAACTTAACCTCGACCCAAAAGTGATAACAGCTGTAGGCAAAGG
CTTATTCCATATCTATGCTATTGAGCATATGGATGAAGCCGTTGAACTACTGATGCAAATGCCCGCGGGTGTTGCCGACG
AAGATAATGATTTCCCACATGATTCTTTGTATGGTTTAGTGCAAGAAAGACTGGATAAGCTTGCGGGTAATGGAGAAGAG
GAAATTGGCATAATGACGAGGTTACTCGCAAAATTGGGATTATTTCGTCGTTAA

Upstream 100 bases:

>100_bases
ATCAATAAAAAGATAAACACGCGCAAAAATACCTATACAGTGAGAGATTTGTTGTCTTGGTATGGTAAAATCGGCGTAAC
TTTTCACGGTAAATGCTTAT

Downstream 100 bases:

>100_bases
TTAGCTGATCGGAGTTGTTTAGCTTACACGTGTTCGCTAATCTTGGCGGTTCTTATTGCTGGAGTAGTAAAATAATGAAT
AAAGCAAACAGTTTCAATAA

Product: ATP-dependent protease

Products: NA

Alternate protein names: ATP-dependent protease La homolog [H]

Number of amino acids: Translated: 577; Mature: 577

Protein sequence:

>577_residues
MNSLLISTSSLAPEFSLPSLSQSAANLSALLLGQERAVDAFKLHNAIAEQQLYLADFPGIDRHLMIRALMDTLTPISTAY
LVATRPVDEAIQFQWQHEQPLDNQGCIAEKNVLYRYLSGNIRRVDLLGRMVQSGNSSKYQAGALAQCHYLFICAESLWKR
ENLWDLVMQILTQKEYQISSTLSPVPLNCKIVLVGAGMIYSQVRSEDWQFQRHFTLLAELASEIDLMRYKESQYAAWLQT
VAQSVDVTLEQSSLAPLFRYSARLTEHQRRLSLSMLDFAQLMAQAKAYRGKPSINASDIEYALSQANYRHNSSEEFSGQS
FDDNFINLPTTGAMVGQINGLTVIDAIDYSYGEPARITASVHYGDGEVADIERKSELGGNIHAKGMMILSACLYRIFGRD
APLHLNANIVFEQSYQEIDGDSASLAEYCCLMSAIAEQPIIQSLAITGALDQFGNVQAIGGINEKIEGFFNLCERRGLTG
EQGVIMPRSNILQLNLDPKVITAVGKGLFHIYAIEHMDEAVELLMQMPAGVADEDNDFPHDSLYGLVQERLDKLAGNGEE
EIGIMTRLLAKLGLFRR

Sequences:

>Translated_577_residues
MNSLLISTSSLAPEFSLPSLSQSAANLSALLLGQERAVDAFKLHNAIAEQQLYLADFPGIDRHLMIRALMDTLTPISTAY
LVATRPVDEAIQFQWQHEQPLDNQGCIAEKNVLYRYLSGNIRRVDLLGRMVQSGNSSKYQAGALAQCHYLFICAESLWKR
ENLWDLVMQILTQKEYQISSTLSPVPLNCKIVLVGAGMIYSQVRSEDWQFQRHFTLLAELASEIDLMRYKESQYAAWLQT
VAQSVDVTLEQSSLAPLFRYSARLTEHQRRLSLSMLDFAQLMAQAKAYRGKPSINASDIEYALSQANYRHNSSEEFSGQS
FDDNFINLPTTGAMVGQINGLTVIDAIDYSYGEPARITASVHYGDGEVADIERKSELGGNIHAKGMMILSACLYRIFGRD
APLHLNANIVFEQSYQEIDGDSASLAEYCCLMSAIAEQPIIQSLAITGALDQFGNVQAIGGINEKIEGFFNLCERRGLTG
EQGVIMPRSNILQLNLDPKVITAVGKGLFHIYAIEHMDEAVELLMQMPAGVADEDNDFPHDSLYGLVQERLDKLAGNGEE
EIGIMTRLLAKLGLFRR
>Mature_577_residues
MNSLLISTSSLAPEFSLPSLSQSAANLSALLLGQERAVDAFKLHNAIAEQQLYLADFPGIDRHLMIRALMDTLTPISTAY
LVATRPVDEAIQFQWQHEQPLDNQGCIAEKNVLYRYLSGNIRRVDLLGRMVQSGNSSKYQAGALAQCHYLFICAESLWKR
ENLWDLVMQILTQKEYQISSTLSPVPLNCKIVLVGAGMIYSQVRSEDWQFQRHFTLLAELASEIDLMRYKESQYAAWLQT
VAQSVDVTLEQSSLAPLFRYSARLTEHQRRLSLSMLDFAQLMAQAKAYRGKPSINASDIEYALSQANYRHNSSEEFSGQS
FDDNFINLPTTGAMVGQINGLTVIDAIDYSYGEPARITASVHYGDGEVADIERKSELGGNIHAKGMMILSACLYRIFGRD
APLHLNANIVFEQSYQEIDGDSASLAEYCCLMSAIAEQPIIQSLAITGALDQFGNVQAIGGINEKIEGFFNLCERRGLTG
EQGVIMPRSNILQLNLDPKVITAVGKGLFHIYAIEHMDEAVELLMQMPAGVADEDNDFPHDSLYGLVQERLDKLAGNGEE
EIGIMTRLLAKLGLFRR

Specific function: Unknown

COG id: COG1067

COG function: function code O; Predicted ATP-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S16 family [H]

Homologues:

Organism=Escherichia coli, GI1787188, Length=445, Percent_Identity=33.2584269662921, Blast_Score=234, Evalue=1e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008269
- InterPro:   IPR008268
- InterPro:   IPR001984
- InterPro:   IPR020568 [H]

Pfam domain/function: PF05362 Lon_C [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 64188; Mature: 64188

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLLISTSSLAPEFSLPSLSQSAANLSALLLGQERAVDAFKLHNAIAEQQLYLADFPGI
CCCEEEECCCCCCCCCCCCCHHHHHHHHHHEECCHHHHHHHHHHHHHHHCCEEEECCCCC
DRHLMIRALMDTLTPISTAYLVATRPVDEAIQFQWQHEQPLDNQGCIAEKNVLYRYLSGN
HHHHHHHHHHHHHCHHHHEEEEEECCHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHCCC
IRRVDLLGRMVQSGNSSKYQAGALAQCHYLFICAESLWKRENLWDLVMQILTQKEYQISS
CEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHC
TLSPVPLNCKIVLVGAGMIYSQVRSEDWQFQRHFTLLAELASEIDLMRYKESQYAAWLQT
CCCCCCCCEEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAQSVDVTLEQSSLAPLFRYSARLTEHQRRLSLSMLDFAQLMAQAKAYRGKPSINASDIE
HHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
YALSQANYRHNSSEEFSGQSFDDNFINLPTTGAMVGQINGLTVIDAIDYSYGEPARITAS
HHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCEECCCCEEEEEECCCCCCCCCEEEEE
VHYGDGEVADIERKSELGGNIHAKGMMILSACLYRIFGRDAPLHLNANIVFEQSYQEIDG
EECCCCCEECCHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCEEECCEEEEECCHHHCCC
DSASLAEYCCLMSAIAEQPIIQSLAITGALDQFGNVQAIGGINEKIEGFFNLCERRGLTG
CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCC
EQGVIMPRSNILQLNLDPKVITAVGKGLFHIYAIEHMDEAVELLMQMPAGVADEDNDFPH
CCCEEECCCCEEEEECCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
DSLYGLVQERLDKLAGNGEEEIGIMTRLLAKLGLFRR
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNSLLISTSSLAPEFSLPSLSQSAANLSALLLGQERAVDAFKLHNAIAEQQLYLADFPGI
CCCEEEECCCCCCCCCCCCCHHHHHHHHHHEECCHHHHHHHHHHHHHHHCCEEEECCCCC
DRHLMIRALMDTLTPISTAYLVATRPVDEAIQFQWQHEQPLDNQGCIAEKNVLYRYLSGN
HHHHHHHHHHHHHCHHHHEEEEEECCHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHCCC
IRRVDLLGRMVQSGNSSKYQAGALAQCHYLFICAESLWKRENLWDLVMQILTQKEYQISS
CEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHC
TLSPVPLNCKIVLVGAGMIYSQVRSEDWQFQRHFTLLAELASEIDLMRYKESQYAAWLQT
CCCCCCCCEEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAQSVDVTLEQSSLAPLFRYSARLTEHQRRLSLSMLDFAQLMAQAKAYRGKPSINASDIE
HHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
YALSQANYRHNSSEEFSGQSFDDNFINLPTTGAMVGQINGLTVIDAIDYSYGEPARITAS
HHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCEECCCCEEEEEECCCCCCCCCEEEEE
VHYGDGEVADIERKSELGGNIHAKGMMILSACLYRIFGRDAPLHLNANIVFEQSYQEIDG
EECCCCCEECCHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCEEECCEEEEECCHHHCCC
DSASLAEYCCLMSAIAEQPIIQSLAITGALDQFGNVQAIGGINEKIEGFFNLCERRGLTG
CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCC
EQGVIMPRSNILQLNLDPKVITAVGKGLFHIYAIEHMDEAVELLMQMPAGVADEDNDFPH
CCCEEECCCCEEEEECCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
DSLYGLVQERLDKLAGNGEEEIGIMTRLLAKLGLFRR
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]