| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120599170
Identifier: 120599170
GI number: 120599170
Start: 2728713
End: 2729393
Strand: Direct
Name: 120599170
Synonym: Sputw3181_2366
Alternate gene names: NA
Gene position: 2728713-2729393 (Clockwise)
Preceding gene: 120599162
Following gene: 120599173
Centisome position: 57.95
GC content: 43.47
Gene sequence:
>681_bases ATGCAGCTAAAACCGTTAGCCAAAGGACGTTATAGCCAGCGATGGGAGCAAGACTATCCCCTTATTGAAGCGGTGATACT AAGCTGTATCAGCGAAGTTAAAATGCTTAAAAAAGGCGCTCATCTAATGACACAAGGTGAAACCATGGCCTCACTGGTAT TGGTAAAACAAGGGCGCGTATCACTTGGCCATACCGCCAGAAATGGTCGATGTTTTCAATTAGGGACTATCGATTGTGAT TCACAACTTTTTGGTGAGATGGAGTTTTTTACTCAGTATCACTGTCAGTTGGATATTATTGCCAATGAACCCTTAGAAAT CATGATCATTAGCGCCGAAAAACTGCAGTGCTCCCTTGGGCAACATCCGCAGCTTGCGTTATTTTTCGCCAGTGCCATTG CTATTGACTACCAAGACACCGTCGATATTTTTACCCGGCGACTGCTTTATCCCATCAGCTATAACGTGGCATATGATATT TACCATGAATATTTAAATGATTTACCCGTCGATGGCTTTAGTAAACGCTATTTAGAGGCGGAGCGATTTGGTACAACAGA TCGGGTCTATCGACGTGCGCTACAGCTACTTGAGGAACGTGGCCTGATTGAACGCAACAAAGAAGGGATTAGGATTAAAG ATCTCAATGCCCTTAAACAATTCGTTGAAGCTGCGATATAG
Upstream 100 bases:
>100_bases GCCCACCGTCGCAGCTCAAATCCTTTAGCTCATTTGACCACTTCTCACGATAATGTTATAGAAGACCGCGATTTTGAACA GGATAAGAGGATCATACTCA
Downstream 100 bases:
>100_bases CAAAATTAAAAAAGCCCACTCTCGAGGTTATTCATTCGCGAAAGTGGACCAAATAAATTAACTTAGCAAATGGATCTTAG GCCGCTGCAGGCTTCATTCG
Product: cyclic nucleotide-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MQLKPLAKGRYSQRWEQDYPLIEAVILSCISEVKMLKKGAHLMTQGETMASLVLVKQGRVSLGHTARNGRCFQLGTIDCD SQLFGEMEFFTQYHCQLDIIANEPLEIMIISAEKLQCSLGQHPQLALFFASAIAIDYQDTVDIFTRRLLYPISYNVAYDI YHEYLNDLPVDGFSKRYLEAERFGTTDRVYRRALQLLEERGLIERNKEGIRIKDLNALKQFVEAAI
Sequences:
>Translated_226_residues MQLKPLAKGRYSQRWEQDYPLIEAVILSCISEVKMLKKGAHLMTQGETMASLVLVKQGRVSLGHTARNGRCFQLGTIDCD SQLFGEMEFFTQYHCQLDIIANEPLEIMIISAEKLQCSLGQHPQLALFFASAIAIDYQDTVDIFTRRLLYPISYNVAYDI YHEYLNDLPVDGFSKRYLEAERFGTTDRVYRRALQLLEERGLIERNKEGIRIKDLNALKQFVEAAI >Mature_226_residues MQLKPLAKGRYSQRWEQDYPLIEAVILSCISEVKMLKKGAHLMTQGETMASLVLVKQGRVSLGHTARNGRCFQLGTIDCD SQLFGEMEFFTQYHCQLDIIANEPLEIMIISAEKLQCSLGQHPQLALFFASAIAIDYQDTVDIFTRRLLYPISYNVAYDI YHEYLNDLPVDGFSKRYLEAERFGTTDRVYRRALQLLEERGLIERNKEGIRIKDLNALKQFVEAAI
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25992; Mature: 25992
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLKPLAKGRYSQRWEQDYPLIEAVILSCISEVKMLKKGAHLMTQGETMASLVLVKQGRV CCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCC SLGHTARNGRCFQLGTIDCDSQLFGEMEFFTQYHCQLDIIANEPLEIMIISAEKLQCSLG EECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHEEEEEEECCCEEEEEEEHHHHHHCCC QHPQLALFFASAIAIDYQDTVDIFTRRLLYPISYNVAYDIYHEYLNDLPVDGFSKRYLEA CCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH ERFGTTDRVYRRALQLLEERGLIERNKEGIRIKDLNALKQFVEAAI HHCCCHHHHHHHHHHHHHHCCCHHCCCCCCEEEHHHHHHHHHHHCC >Mature Secondary Structure MQLKPLAKGRYSQRWEQDYPLIEAVILSCISEVKMLKKGAHLMTQGETMASLVLVKQGRV CCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCC SLGHTARNGRCFQLGTIDCDSQLFGEMEFFTQYHCQLDIIANEPLEIMIISAEKLQCSLG EECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHEEEEEEECCCEEEEEEEHHHHHHCCC QHPQLALFFASAIAIDYQDTVDIFTRRLLYPISYNVAYDIYHEYLNDLPVDGFSKRYLEA CCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH ERFGTTDRVYRRALQLLEERGLIERNKEGIRIKDLNALKQFVEAAI HHCCCHHHHHHHHHHHHHHCCCHHCCCCCCEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA