Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120599158

Identifier: 120599158

GI number: 120599158

Start: 2714976

End: 2716136

Strand: Direct

Name: 120599158

Synonym: Sputw3181_2354

Alternate gene names: NA

Gene position: 2714976-2716136 (Clockwise)

Preceding gene: 120599155

Following gene: 120599159

Centisome position: 57.66

GC content: 47.29

Gene sequence:

>1161_bases
ATGCCATTTTATGTAAAACAGGGGCAGATCCCCCATAAGCGCCATATCGCATTTGAAAAGGAAAACGGTGAGCTTTACCG
TGAAGAGTTGTTCTCAACCCATGGCTTTTCCAATATTTATTCCAATAAATATCACCACAACATGCCCACCAAAGCGTTGG
AAGTGGCGTCCTACAGCTTGAGCCACGGTGCCAATTGGGAAGACTCGCTGGTCCAAAACTATAAACTCGATTCCCGCGAT
GCCGACCGTGAAGGTAATTTTTTCAGCGGCCGTAACAAAATATTTTATAACAATGATTTAGCTCTCTATACCGCCAAAGT
CACCGCCGATACCGACGAATTTTACCGTAACGCCTATGCCGATGAAGTGGTTTTTGTCCACGAAGGCGAAGGCACACTCT
ACAGCGAGTACGGCACGATTAAGGTCCAAAAATGGGACTATCTCGTGATCCCTCGCGGCACGACTTATCAACTTAAATTC
AACGATTACAGCAATGTGCGACTTTTCGTCATAGAGTCATTCTCTATGGTGGAAGTGCCTAAGCATTTTCGTAACGAGTA
TGGTCAGCTGTTAGAATCGGCACCCTATTGCGAGCGCGATTTGCGCGTGCCTACACTGCAAGAGGCTGTGGTTGAGCGCG
GCGCCTTCCCCTTAGTGTGTAAGTTTGGCGATAAGTACCAACTCACCACACTTGAATGGCATCCCTTTGATTTAGTGGGT
TGGGATGGCTGCGTTTACCCTTGGGCATTCAACATCACAGAATACGCACCCAAGGTAGGCAAAATACATCTCCCCCCTTC
TGATCACTTAGTCTTTACCGCCCATAACTTTGTGATTTGTAACTTCGTGCCACGCCCCTACGATTTCCACCCAAAATCGA
TTCCCGCGCCTTATTACCACAACAATATAGATAGCGACGAAGTCTTGTATTACGTCGATGGCGACTTTATGAGCCGTACG
GGCATTGAAGCGGGTTATATGACCTTACATCAAAAAGGCGTGGCCCACGGACCACAACCGGGTCGCACTGAAGCCTCGAT
TGGCAAAAAAGAAACCTATGAATATGCAGTGATGGTGGACACGTTCGCCCCACTGAAATTAACCGAACATGTACAAAATT
GCATGAGCAAAGACTACAACCGCTCTTGGCTAGAAGACTAG

Upstream 100 bases:

>100_bases
TTATTATTCTTTTTTTTGTTGATCCAAGCAACTAAATTGATAACAAGATCACATAACAATAACGATATACAACACTGATC
AAACAAGGACCTCTTTAGCC

Downstream 100 bases:

>100_bases
CCCCAAGCCACCAGCACTCCCATGCGGGAGTCATTAGAGTGACGGCGTGTTGCACTAAAATAACGAGGAAAACATCATGG
CAAGCGAACTCAATCCACTG

Product: homogentisate 1,2-dioxygenase

Products: 4-maleylacetoacetate

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MPFYVKQGQIPHKRHIAFEKENGELYREELFSTHGFSNIYSNKYHHNMPTKALEVASYSLSHGANWEDSLVQNYKLDSRD
ADREGNFFSGRNKIFYNNDLALYTAKVTADTDEFYRNAYADEVVFVHEGEGTLYSEYGTIKVQKWDYLVIPRGTTYQLKF
NDYSNVRLFVIESFSMVEVPKHFRNEYGQLLESAPYCERDLRVPTLQEAVVERGAFPLVCKFGDKYQLTTLEWHPFDLVG
WDGCVYPWAFNITEYAPKVGKIHLPPSDHLVFTAHNFVICNFVPRPYDFHPKSIPAPYYHNNIDSDEVLYYVDGDFMSRT
GIEAGYMTLHQKGVAHGPQPGRTEASIGKKETYEYAVMVDTFAPLKLTEHVQNCMSKDYNRSWLED

Sequences:

>Translated_386_residues
MPFYVKQGQIPHKRHIAFEKENGELYREELFSTHGFSNIYSNKYHHNMPTKALEVASYSLSHGANWEDSLVQNYKLDSRD
ADREGNFFSGRNKIFYNNDLALYTAKVTADTDEFYRNAYADEVVFVHEGEGTLYSEYGTIKVQKWDYLVIPRGTTYQLKF
NDYSNVRLFVIESFSMVEVPKHFRNEYGQLLESAPYCERDLRVPTLQEAVVERGAFPLVCKFGDKYQLTTLEWHPFDLVG
WDGCVYPWAFNITEYAPKVGKIHLPPSDHLVFTAHNFVICNFVPRPYDFHPKSIPAPYYHNNIDSDEVLYYVDGDFMSRT
GIEAGYMTLHQKGVAHGPQPGRTEASIGKKETYEYAVMVDTFAPLKLTEHVQNCMSKDYNRSWLED
>Mature_385_residues
PFYVKQGQIPHKRHIAFEKENGELYREELFSTHGFSNIYSNKYHHNMPTKALEVASYSLSHGANWEDSLVQNYKLDSRDA
DREGNFFSGRNKIFYNNDLALYTAKVTADTDEFYRNAYADEVVFVHEGEGTLYSEYGTIKVQKWDYLVIPRGTTYQLKFN
DYSNVRLFVIESFSMVEVPKHFRNEYGQLLESAPYCERDLRVPTLQEAVVERGAFPLVCKFGDKYQLTTLEWHPFDLVGW
DGCVYPWAFNITEYAPKVGKIHLPPSDHLVFTAHNFVICNFVPRPYDFHPKSIPAPYYHNNIDSDEVLYYVDGDFMSRTG
IEAGYMTLHQKGVAHGPQPGRTEASIGKKETYEYAVMVDTFAPLKLTEHVQNCMSKDYNRSWLED

Specific function: Unknown

COG id: COG3508

COG function: function code Q; Homogentisate 1,2-dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the homogentisate dioxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR005708
- InterPro:   IPR014710 [H]

Pfam domain/function: PF04209 HgmA [H]

EC number: 1.13.11.5

Molecular weight: Translated: 44815; Mature: 44683

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFYVKQGQIPHKRHIAFEKENGELYREELFSTHGFSNIYSNKYHHNMPTKALEVASYSL
CCEEECCCCCCHHHCEEEECCCCHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHH
SHGANWEDSLVQNYKLDSRDADREGNFFSGRNKIFYNNDLALYTAKVTADTDEFYRNAYA
CCCCCCHHHHHHHCCCCCCCCCCCCCEECCCCEEEECCCEEEEEEEEECCHHHHHHHHCC
DEVVFVHEGEGTLYSEYGTIKVQKWDYLVIPRGTTYQLKFNDYSNVRLFVIESFSMVEVP
CCEEEEECCCCEEEECCCEEEEEECEEEEEECCCEEEEEECCCCCEEEEEEECCCHHHHH
KHFRNEYGQLLESAPYCERDLRVPTLQEAVVERGAFPLVCKFGDKYQLTTLEWHPFDLVG
HHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHCCCCEEEEECCCEEEEEEEEECCCEEEC
WDGCVYPWAFNITEYAPKVGKIHLPPSDHLVFTAHNFVICNFVPRPYDFHPKSIPAPYYH
CCCEECCEEECHHHHCCCCCEEECCCCCCEEEEECCEEEEEECCCCCCCCCCCCCCCCCC
NNIDSDEVLYYVDGDFMSRTGIEAGYMTLHQKGVAHGPQPGRTEASIGKKETYEYAVMVD
CCCCCCCEEEEECCCCHHHCCCCHHHHEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEE
TFAPLKLTEHVQNCMSKDYNRSWLED
CCCCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PFYVKQGQIPHKRHIAFEKENGELYREELFSTHGFSNIYSNKYHHNMPTKALEVASYSL
CEEECCCCCCHHHCEEEECCCCHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHH
SHGANWEDSLVQNYKLDSRDADREGNFFSGRNKIFYNNDLALYTAKVTADTDEFYRNAYA
CCCCCCHHHHHHHCCCCCCCCCCCCCEECCCCEEEECCCEEEEEEEEECCHHHHHHHHCC
DEVVFVHEGEGTLYSEYGTIKVQKWDYLVIPRGTTYQLKFNDYSNVRLFVIESFSMVEVP
CCEEEEECCCCEEEECCCEEEEEECEEEEEECCCEEEEEECCCCCEEEEEEECCCHHHHH
KHFRNEYGQLLESAPYCERDLRVPTLQEAVVERGAFPLVCKFGDKYQLTTLEWHPFDLVG
HHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHCCCCEEEEECCCEEEEEEEEECCCEEEC
WDGCVYPWAFNITEYAPKVGKIHLPPSDHLVFTAHNFVICNFVPRPYDFHPKSIPAPYYH
CCCEECCEEECHHHHCCCCCEEECCCCCCEEEEECCEEEEEECCCCCCCCCCCCCCCCCC
NNIDSDEVLYYVDGDFMSRTGIEAGYMTLHQKGVAHGPQPGRTEASIGKKETYEYAVMVD
CCCCCCCEEEEECCCCHHHCCCCHHHHEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEE
TFAPLKLTEHVQNCMSKDYNRSWLED
CCCCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: homogentisate; O2

Specific reaction: homogentisate + O2 = 4-maleylacetoacetate

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11427726 [H]