Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is yfgD [H]

Identifier: 120599135

GI number: 120599135

Start: 2685663

End: 2686013

Strand: Direct

Name: yfgD [H]

Synonym: Sputw3181_2331

Alternate gene names: 120599135

Gene position: 2685663-2686013 (Clockwise)

Preceding gene: 120599134

Following gene: 120599136

Centisome position: 57.04

GC content: 43.3

Gene sequence:

>351_bases
ATGACCCAAGCGACGATTTACCATAATCCCCGTTGTTCTAAAAGCCGTGAGACCCTCGCGCTACTTGAGCAACAAGGCTG
TGATATTCATGTGATTGAATATTTAAAAAATATGCCAACTGCGGCAGAAATAAGCCAAATTTTAGCCAAACTCGGGATCA
GTGCCCGTGAGTTAATGCGCACCAAAGAAAATGAATACCAAACATTAGGGCTTAGTGATCCATCGCTTAGCGAAGCACAG
TTAATTGAAGCTATGGTCAACAACCCTAAACTCCTTGAGCGTCCAATAGTGCTTGCAAATGGCTACGCGGTAATAGGTCG
TCCACCAGAAAATGTGCTTACTATTCTGTAA

Upstream 100 bases:

>100_bases
TAACCTTGCCAAAAGTGCCCCGAACAACCTGACGGGGCACCTATTTCTCTGTTATTATCCGCGCCATTATTATTTCAGCC
TTGATAGAGCCTCTAATACG

Downstream 100 bases:

>100_bases
TAGATGCCCCTGATCCGATCGCGATTTTCAATCTTAGGTAATGCCATGACATCAAATACCCTTCTTATTCTTAGCCGCTT
TGGCTATCTTGCACTGGTGC

Product: arsenate reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MTQATIYHNPRCSKSRETLALLEQQGCDIHVIEYLKNMPTAAEISQILAKLGISARELMRTKENEYQTLGLSDPSLSEAQ
LIEAMVNNPKLLERPIVLANGYAVIGRPPENVLTIL

Sequences:

>Translated_116_residues
MTQATIYHNPRCSKSRETLALLEQQGCDIHVIEYLKNMPTAAEISQILAKLGISARELMRTKENEYQTLGLSDPSLSEAQ
LIEAMVNNPKLLERPIVLANGYAVIGRPPENVLTIL
>Mature_115_residues
TQATIYHNPRCSKSRETLALLEQQGCDIHVIEYLKNMPTAAEISQILAKLGISARELMRTKENEYQTLGLSDPSLSEAQL
IEAMVNNPKLLERPIVLANGYAVIGRPPENVLTIL

Specific function: Unknown

COG id: COG1393

COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ArsC family [H]

Homologues:

Organism=Escherichia coli, GI1788841, Length=115, Percent_Identity=60.8695652173913, Blast_Score=134, Evalue=1e-33,
Organism=Escherichia coli, GI1789918, Length=116, Percent_Identity=39.6551724137931, Blast_Score=92, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006659
- InterPro:   IPR006660
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF03960 ArsC [H]

EC number: NA

Molecular weight: Translated: 12903; Mature: 12772

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQATIYHNPRCSKSRETLALLEQQGCDIHVIEYLKNMPTAAEISQILAKLGISARELMR
CCCCEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHH
TKENEYQTLGLSDPSLSEAQLIEAMVNNPKLLERPIVLANGYAVIGRPPENVLTIL
HCCCCCEEECCCCCCCHHHHHHHHHHCCCCHHHCCEEEECCEEEECCCCHHHEECC
>Mature Secondary Structure 
TQATIYHNPRCSKSRETLALLEQQGCDIHVIEYLKNMPTAAEISQILAKLGISARELMR
CCCEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHH
TKENEYQTLGLSDPSLSEAQLIEAMVNNPKLLERPIVLANGYAVIGRPPENVLTIL
HCCCCCEEECCCCCCCHHHHHHHHHHCCCCHHHCCEEEECCEEEECCCCHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 10493123 [H]