| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is chvG [H]
Identifier: 120599092
GI number: 120599092
Start: 2635426
End: 2637585
Strand: Direct
Name: chvG [H]
Synonym: Sputw3181_2288
Alternate gene names: 120599092
Gene position: 2635426-2637585 (Clockwise)
Preceding gene: 120599091
Following gene: 120599093
Centisome position: 55.97
GC content: 47.82
Gene sequence:
>2160_bases ATGACACGTTTTCCCTTCGGCTTACGCACAAAAGTCATTGGCCTTAGCCTATTTTTACTCTGCCTACCTTGGCTTGGGTA TCAATATGTTTGGGAGATGGAAAAGTACTTACGCCATGGTCAAGAACGTACTTTAGAAGGAACCACACAGGCGCTTGCAA CTGCGCTGCACGAGCGCCCAAAGCTGTTTGATGGCCAAGCGAGCTTTTTAAAGCAAGTGGAAAAAAGTCGCGATCTCTAC GCCTATCCACTGGCGGGAGCAATATTACTCGATGGAAAACTTAACGAGTGGCAGGAATATCAGCACAGATTTATCCAATA CGGAGAGGCGAATCAAATCATGCGCGCCGATCCAACCACGCCCTTAACCTTAAGTTTTACCCATATGGTCGGCCAATATG ATGGTTACCTGTACGCCTTTTTCCAAGTAGTTGACCCTAATGTGGTGTTTCGCGGCAAAAATGCCCTCAGTGTCGATAGA AATGATCACTTATCCATCGCCACATTGTCACCCGACAATAAATTCAAACGCTATATTGTTGCCACCACTCAGCCAGGCTG GATCAGCGCCTTCGAATTACCCGCTAATCCTAAGCTGACGGTGCCTGTCACCCCGGAAGTGCGTATCCAAGGACAATGGG CAACAACCGATGTGGGCTACAATATTGAGCTGCGTATTCCCCTTAATATGGTCGGTAGCAAACTCGGCTTTGCCATTGCC GATGTGAATGACAGTAAATATCGCGACATCACCGCAATTGTGGGTACATCCGCCTTGGACACCGTCGATAAACTCGGCAC TGTATTAGTTCCATCACCAGAAATTGAAAGTATTATCAAAGGGATGAGTCACTATAGCTCAAGAGTATGGGTGGTAGACA AACATGGGCGGGTATTAGCGAAATCCGGAGATCTGCGCGCGAATAGCAGTGTCTGGACCCGCACCTTAGAAGATGAAACA CCAGGCTCACTCTGGGGAAGCTTTAAACGGGATTATCTGCATCCCCTGTATTACAAAATTCTGACAAAACCACCCAAGGA TTTTATTGATTCGCTGCAGGATTCTACTGAACTTGATGGCAGCCATATCCAAAAAGCGCTCTCGGGTCAGCAAAGTTCGA CTTGGCGCTTAACCCCAGATAACAAAGCGGTAGTACTCGCCGCTGCGAGCCCTATCTGGATTGATAACAATGTGATGGGC GCCGTCGTTGCCGAAGAAACCACCCACGGTATTCGTACTCTACGTAACCGTGCCTTGGAAAAACTCTTTAACGTGATCTT GACCATTATGAGCATGGGCACACTGGCGCTGTTCTTCTTTGCTTCGAGTATTTCAAACCGAATTCGCAAACTGCGGGATG AGGCAGAAAATGCCATCGACAGCCAAGGTCGAGTGCGCAATAACCTTAAACCGTCAAAGGCTCGGGATGAAATTGGCGAT CTTTCGCGTAGTTTTTCGAGTATCGTCGGACGCCTAGGCCAATACACCCATTATTTGGAAAATATGTCGTCGCGCCTCTC CCACGAACTCCGTACCCCCGTCGCCGTAGTGCGATCGTCCCTTGAGCATTTAAACCTGCAAACCTTAGATCAAGATGCGC AAAAATATGTCGACCGCGCGCAGGAAGGCGTGAGCCGCTTAAGCATGATGCTCAATAATATGAGCGAAGCAACGCGCCTA GAGCAAAGTTTATTGCAGGCTGATATCACTAAGTTTCCACTGTCTCAAGTGATCAGCGGTTGTATGCAGGGGTATCAAAT CACTTATCCTGAACAACGATTTAGCGTAAAAGTGCCAGAACAGCCGCTGATGATGCAAGGCGTACCCGAATATATCGCTC AGTTAATGGATAAGCTTATCGCCAACGCGATTGAGTTTTGTCACAAGGATAGCGCCATTGAAGTGACGCTCACCCAAGTA GGTAAACAAGCCACATTACTGATCAGTAACTTAGGGCCTGAACTCCCAATTGATATGTCGGAGCAGATTTTCGATTCTAT GGTGTCAGTGCGGATAAATCAGGCTCAAGATAAACCGCACCTCGGCTTAGGCTTATATATTGCGCGGCTAGTCGCTGAGT TCCATCAAGGCAAAATTCTCGCCCGTAACCGTAGCGAACACGATGGTGTGGATATCCTAGTCACACTGCCATTAAATTAA
Upstream 100 bases:
>100_bases CTGCTCCTGAATTTGATTGTATCGATACGGTTTATGGCATGGGCTACCGCTGGGACAGCCTAGCCTAAGTAATGATGGGA TCTGCTTTGATGTATAACCT
Downstream 100 bases:
>100_bases CAAATTAAGTAGGTCCTTGGTCAAAGTGAGGCTTCCTTTAGAGCAGAACCTATCGACAAATGGCACAGGAGCGAAGAACA TGAGCCAAACTCATCACTTC
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: Histidine kinase sensory protein ExoS [H]
Number of amino acids: Translated: 719; Mature: 718
Protein sequence:
>719_residues MTRFPFGLRTKVIGLSLFLLCLPWLGYQYVWEMEKYLRHGQERTLEGTTQALATALHERPKLFDGQASFLKQVEKSRDLY AYPLAGAILLDGKLNEWQEYQHRFIQYGEANQIMRADPTTPLTLSFTHMVGQYDGYLYAFFQVVDPNVVFRGKNALSVDR NDHLSIATLSPDNKFKRYIVATTQPGWISAFELPANPKLTVPVTPEVRIQGQWATTDVGYNIELRIPLNMVGSKLGFAIA DVNDSKYRDITAIVGTSALDTVDKLGTVLVPSPEIESIIKGMSHYSSRVWVVDKHGRVLAKSGDLRANSSVWTRTLEDET PGSLWGSFKRDYLHPLYYKILTKPPKDFIDSLQDSTELDGSHIQKALSGQQSSTWRLTPDNKAVVLAAASPIWIDNNVMG AVVAEETTHGIRTLRNRALEKLFNVILTIMSMGTLALFFFASSISNRIRKLRDEAENAIDSQGRVRNNLKPSKARDEIGD LSRSFSSIVGRLGQYTHYLENMSSRLSHELRTPVAVVRSSLEHLNLQTLDQDAQKYVDRAQEGVSRLSMMLNNMSEATRL EQSLLQADITKFPLSQVISGCMQGYQITYPEQRFSVKVPEQPLMMQGVPEYIAQLMDKLIANAIEFCHKDSAIEVTLTQV GKQATLLISNLGPELPIDMSEQIFDSMVSVRINQAQDKPHLGLGLYIARLVAEFHQGKILARNRSEHDGVDILVTLPLN
Sequences:
>Translated_719_residues MTRFPFGLRTKVIGLSLFLLCLPWLGYQYVWEMEKYLRHGQERTLEGTTQALATALHERPKLFDGQASFLKQVEKSRDLY AYPLAGAILLDGKLNEWQEYQHRFIQYGEANQIMRADPTTPLTLSFTHMVGQYDGYLYAFFQVVDPNVVFRGKNALSVDR NDHLSIATLSPDNKFKRYIVATTQPGWISAFELPANPKLTVPVTPEVRIQGQWATTDVGYNIELRIPLNMVGSKLGFAIA DVNDSKYRDITAIVGTSALDTVDKLGTVLVPSPEIESIIKGMSHYSSRVWVVDKHGRVLAKSGDLRANSSVWTRTLEDET PGSLWGSFKRDYLHPLYYKILTKPPKDFIDSLQDSTELDGSHIQKALSGQQSSTWRLTPDNKAVVLAAASPIWIDNNVMG AVVAEETTHGIRTLRNRALEKLFNVILTIMSMGTLALFFFASSISNRIRKLRDEAENAIDSQGRVRNNLKPSKARDEIGD LSRSFSSIVGRLGQYTHYLENMSSRLSHELRTPVAVVRSSLEHLNLQTLDQDAQKYVDRAQEGVSRLSMMLNNMSEATRL EQSLLQADITKFPLSQVISGCMQGYQITYPEQRFSVKVPEQPLMMQGVPEYIAQLMDKLIANAIEFCHKDSAIEVTLTQV GKQATLLISNLGPELPIDMSEQIFDSMVSVRINQAQDKPHLGLGLYIARLVAEFHQGKILARNRSEHDGVDILVTLPLN >Mature_718_residues TRFPFGLRTKVIGLSLFLLCLPWLGYQYVWEMEKYLRHGQERTLEGTTQALATALHERPKLFDGQASFLKQVEKSRDLYA YPLAGAILLDGKLNEWQEYQHRFIQYGEANQIMRADPTTPLTLSFTHMVGQYDGYLYAFFQVVDPNVVFRGKNALSVDRN DHLSIATLSPDNKFKRYIVATTQPGWISAFELPANPKLTVPVTPEVRIQGQWATTDVGYNIELRIPLNMVGSKLGFAIAD VNDSKYRDITAIVGTSALDTVDKLGTVLVPSPEIESIIKGMSHYSSRVWVVDKHGRVLAKSGDLRANSSVWTRTLEDETP GSLWGSFKRDYLHPLYYKILTKPPKDFIDSLQDSTELDGSHIQKALSGQQSSTWRLTPDNKAVVLAAASPIWIDNNVMGA VVAEETTHGIRTLRNRALEKLFNVILTIMSMGTLALFFFASSISNRIRKLRDEAENAIDSQGRVRNNLKPSKARDEIGDL SRSFSSIVGRLGQYTHYLENMSSRLSHELRTPVAVVRSSLEHLNLQTLDQDAQKYVDRAQEGVSRLSMMLNNMSEATRLE QSLLQADITKFPLSQVISGCMQGYQITYPEQRFSVKVPEQPLMMQGVPEYIAQLMDKLIANAIEFCHKDSAIEVTLTQVG KQATLLISNLGPELPIDMSEQIFDSMVSVRINQAQDKPHLGLGLYIARLVAEFHQGKILARNRSEHDGVDILVTLPLN
Specific function: Member of a two-component regulatory system ChvG(ExoS)/ChvI involved in regulating the production of succinoglycan. Activates ChvI by phosphorylation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=248, Percent_Identity=23.3870967741935, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1786912, Length=217, Percent_Identity=26.7281105990783, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1790346, Length=275, Percent_Identity=24.7272727272727, Blast_Score=67, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 80825; Mature: 80693
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRFPFGLRTKVIGLSLFLLCLPWLGYQYVWEMEKYLRHGQERTLEGTTQALATALHERP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHHHCC KLFDGQASFLKQVEKSRDLYAYPLAGAILLDGKLNEWQEYQHRFIQYGEANQIMRADPTT CCCCCHHHHHHHHHHCCCEEEECCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEECCCCC PLTLSFTHMVGQYDGYLYAFFQVVDPNVVFRGKNALSVDRNDHLSIATLSPDNKFKRYIV CEEEEHHHHHHCCCCCEEEEEEEECCCEEEECCCEEECCCCCCEEEEEECCCCCCEEEEE ATTQPGWISAFELPANPKLTVPVTPEVRIQGQWATTDVGYNIELRIPLNMVGSKLGFAIA EECCCCCEEEEECCCCCEEEEECCCCEEEECEEEEECCCEEEEEEECHHHHHHHHCEEEE DVNDSKYRDITAIVGTSALDTVDKLGTVLVPSPEIESIIKGMSHYSSRVWVVDKHGRVLA CCCCCCHHHHHHHHCCHHHHHHHHCCEEECCCCCHHHHHHHHHHHCCEEEEEECCCEEEE KSGDLRANSSVWTRTLEDETPGSLWGSFKRDYLHPLYYKILTKPPKDFIDSLQDSTELDG ECCCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCH SHIQKALSGQQSSTWRLTPDNKAVVLAAASPIWIDNNVMGAVVAEETTHGIRTLRNRALE HHHHHHHCCCCCCEEEECCCCCEEEEEECCCEEECCCCEEEEEEHHHHHHHHHHHHHHHH KLFNVILTIMSMGTLALFFFASSISNRIRKLRDEAENAIDSQGRVRNNLKPSKARDEIGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHH LSRSFSSIVGRLGQYTHYLENMSSRLSHELRTPVAVVRSSLEHLNLQTLDQDAQKYVDRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHH QEGVSRLSMMLNNMSEATRLEQSLLQADITKFPLSQVISGCMQGYQITYPEQRFSVKVPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEECCCCCCEEECCC QPLMMQGVPEYIAQLMDKLIANAIEFCHKDSAIEVTLTQVGKQATLLISNLGPELPIDMS CCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCHHEEEEECCCCCCCCCCH EQIFDSMVSVRINQAQDKPHLGLGLYIARLVAEFHQGKILARNRSEHDGVDILVTLPLN HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEECCC >Mature Secondary Structure TRFPFGLRTKVIGLSLFLLCLPWLGYQYVWEMEKYLRHGQERTLEGTTQALATALHERP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHHHCC KLFDGQASFLKQVEKSRDLYAYPLAGAILLDGKLNEWQEYQHRFIQYGEANQIMRADPTT CCCCCHHHHHHHHHHCCCEEEECCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEECCCCC PLTLSFTHMVGQYDGYLYAFFQVVDPNVVFRGKNALSVDRNDHLSIATLSPDNKFKRYIV CEEEEHHHHHHCCCCCEEEEEEEECCCEEEECCCEEECCCCCCEEEEEECCCCCCEEEEE ATTQPGWISAFELPANPKLTVPVTPEVRIQGQWATTDVGYNIELRIPLNMVGSKLGFAIA EECCCCCEEEEECCCCCEEEEECCCCEEEECEEEEECCCEEEEEEECHHHHHHHHCEEEE DVNDSKYRDITAIVGTSALDTVDKLGTVLVPSPEIESIIKGMSHYSSRVWVVDKHGRVLA CCCCCCHHHHHHHHCCHHHHHHHHCCEEECCCCCHHHHHHHHHHHCCEEEEEECCCEEEE KSGDLRANSSVWTRTLEDETPGSLWGSFKRDYLHPLYYKILTKPPKDFIDSLQDSTELDG ECCCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCH SHIQKALSGQQSSTWRLTPDNKAVVLAAASPIWIDNNVMGAVVAEETTHGIRTLRNRALE HHHHHHHCCCCCCEEEECCCCCEEEEEECCCEEECCCCEEEEEEHHHHHHHHHHHHHHHH KLFNVILTIMSMGTLALFFFASSISNRIRKLRDEAENAIDSQGRVRNNLKPSKARDEIGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHH LSRSFSSIVGRLGQYTHYLENMSSRLSHELRTPVAVVRSSLEHLNLQTLDQDAQKYVDRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHH QEGVSRLSMMLNNMSEATRLEQSLLQADITKFPLSQVISGCMQGYQITYPEQRFSVKVPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEECCCCCCEEECCC QPLMMQGVPEYIAQLMDKLIANAIEFCHKDSAIEVTLTQVGKQATLLISNLGPELPIDMS CCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCHHEEEEECCCCCCCCCCH EQIFDSMVSVRINQAQDKPHLGLGLYIARLVAEFHQGKILARNRSEHDGVDILVTLPLN HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9422587; 11481430; 7559334 [H]