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The map label for this gene is yifE [H]

Identifier: 120599084

GI number: 120599084

Start: 2625936

End: 2626382

Strand: Direct

Name: yifE [H]

Synonym: Sputw3181_2280

Alternate gene names: 120599084

Gene position: 2625936-2626382 (Clockwise)

Preceding gene: 120599082

Following gene: 120599085

Centisome position: 55.77

GC content: 45.41

Gene sequence:

>447_bases
ATGTCTGAACAGTCTATTTCAAACGCTAACAAGGGTTCTGAGACGGTTAACGGCTCAGCTGCCAGTTTTGTATCGCACAA
ACGATTCTATGACGATACAAACTTTCCCAAGGGCTTTAAACGCAGTGGTGACTTTACCAGTAAAGAGGCTGAACTCCTTG
AATTGCATGGTCATGCAATGAAAAATCTCGCCGAAGGAAAGGCACTTCCTTGTACTGCCGACGAAGCACAATTTGTTGAA
GTCGCTAAAGGAAATATCGCTCCCAGTAGCTTGTTGGAGCAGATCTGGTTAAAGTACCGCAAACTCGCCCAAGGTAAGCC
TTTTTATGCCGTGGTTGGTACGGTGCATTTGCCTGCAACTAAGCCTGAAGTCGAGCCAGAAGTGATATTTGATGTTGATA
TTGAAGATGACGTTCAGGATGAGCCTGAACCCGAGGATAAAGCATGA

Upstream 100 bases:

>100_bases
TTGACCAACATTGGCAAATTTTTTTGATTTATAAATCAATAATACTAGCCAATACTCCAGTTGCAAATCTTTGTTTATCA
AAAACTAGAAGGTAACTGCC

Downstream 100 bases:

>100_bases
AAATTAAGGTTTGCGACTAAATGCGCGGTTGGATTTTATATAAAGAAACCGCGACTCAGCTAAAACCTGAATGGTATGAA
ATTGAGCGTCTGCTGGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MSEQSISNANKGSETVNGSAASFVSHKRFYDDTNFPKGFKRSGDFTSKEAELLELHGHAMKNLAEGKALPCTADEAQFVE
VAKGNIAPSSLLEQIWLKYRKLAQGKPFYAVVGTVHLPATKPEVEPEVIFDVDIEDDVQDEPEPEDKA

Sequences:

>Translated_148_residues
MSEQSISNANKGSETVNGSAASFVSHKRFYDDTNFPKGFKRSGDFTSKEAELLELHGHAMKNLAEGKALPCTADEAQFVE
VAKGNIAPSSLLEQIWLKYRKLAQGKPFYAVVGTVHLPATKPEVEPEVIFDVDIEDDVQDEPEPEDKA
>Mature_147_residues
SEQSISNANKGSETVNGSAASFVSHKRFYDDTNFPKGFKRSGDFTSKEAELLELHGHAMKNLAEGKALPCTADEAQFVEV
AKGNIAPSSLLEQIWLKYRKLAQGKPFYAVVGTVHLPATKPEVEPEVIFDVDIEDDVQDEPEPEDKA

Specific function: Unknown

COG id: COG3085

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0438 family [H]

Homologues:

Organism=Escherichia coli, GI2367277, Length=107, Percent_Identity=41.1214953271028, Blast_Score=85, Evalue=2e-18,

Paralogues:

None

Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007335 [H]

Pfam domain/function: PF04219 DUF413 [H]

EC number: NA

Molecular weight: Translated: 16268; Mature: 16137

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQSISNANKGSETVNGSAASFVSHKRFYDDTNFPKGFKRSGDFTSKEAELLELHGHAM
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
KNLAEGKALPCTADEAQFVEVAKGNIAPSSLLEQIWLKYRKLAQGKPFYAVVGTVHLPAT
HHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCC
KPEVEPEVIFDVDIEDDVQDEPEPEDKA
CCCCCCEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SEQSISNANKGSETVNGSAASFVSHKRFYDDTNFPKGFKRSGDFTSKEAELLELHGHAM
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
KNLAEGKALPCTADEAQFVEVAKGNIAPSSLLEQIWLKYRKLAQGKPFYAVVGTVHLPAT
HHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCC
KPEVEPEVIFDVDIEDDVQDEPEPEDKA
CCCCCCEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]