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The map label for this gene is yiaD [H]

Identifier: 120599047

GI number: 120599047

Start: 2590228

End: 2591094

Strand: Direct

Name: yiaD [H]

Synonym: Sputw3181_2243

Alternate gene names: 120599047

Gene position: 2590228-2591094 (Clockwise)

Preceding gene: 120599046

Following gene: 120599050

Centisome position: 55.01

GC content: 49.94

Gene sequence:

>867_bases
ATGAAAATGCCTAAAGCTTCGTCGGTTTCCCCCTTGCGTTTTAGCCGTCAATTGCTGTCATATAGCCTGCTGCTGACCAC
AGTAGCAGCCTGCAGCAGCGCACCTAAGATGGCTGAAGGCATCAGCGATATACGTACAGAACTTAACACTCTGCAAGCAA
ATAATGAGCTGGCAATCCTCGCACCTGCTGCAATCAGTCAAGCCGAAGAAGCGGTACGTGCCGCTGAGCAACCAGTAAAA
AACGAGCAACTATCACAACATCTCGTGTTTGTTGCTGACCGAAAAGTCAACATTGCCTTAGCCCAAGCGCAAAGTCGCTT
TGCAGAGGATCAGCAAAAGGTTCTCGCAAAAAACCGTGATGATGCCAGACTCGATGCAAGGACGACAGAGGCCAATCAAG
CGCATCAGGATGCGCGCCTAGCCCGTGCTGATGCAGCAGATGCTCGCCAGGAAAGCGATGATGCACAAGCACAGCTTGCT
CTACTTAATGCCCGAGAGTCAGAACGTGGTTGGGTTGTAACCTTGGGCGATGTCTTATTCGATACTGGAAAAGCCAATCT
TAAGTCATCGACGAGTCAGCATCTCACAAACCTAGCAGCCTTTCTGGGTAAATATCCACAACGTGGCGCCATCATTGAAG
GGTATACCGATAGCGTAGGTACTGAGGAGTACAACCTTGGCCTATCGGAGCGAAGGGCTGATAGTGTTAGCAATTTTCTG
CAGGCACAAGGAGTTCAATCCAGTCGACTCAGCAGCCAAGGTAAAGGTGAAAGCTTTCCGGTTGCAAATAATGAGTCCGC
TAGTGGTCGCCAGCAAAACCGTCGAGTTGAAGTGATTATTACCAACGCACCGCAGGCACAACGATAA

Upstream 100 bases:

>100_bases
GTGCTGAACTGGCACAAGCCAACAGCGTCAATGATGAAATGAAAAACAACATCAGCATTCTGCAACAAGAAATGTTGCGC
CGCACAAAAGGAATTCAGCA

Downstream 100 bases:

>100_bases
ATCTTGCTCGATGATTTATCGTTGAAGTTTAGGATAACGTAATAAAAATAAGTACAATAGAAAAGCAAAAAGCCCCATCT
TTCGATGGGGCTTTTGCAAT

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MKMPKASSVSPLRFSRQLLSYSLLLTTVAACSSAPKMAEGISDIRTELNTLQANNELAILAPAAISQAEEAVRAAEQPVK
NEQLSQHLVFVADRKVNIALAQAQSRFAEDQQKVLAKNRDDARLDARTTEANQAHQDARLARADAADARQESDDAQAQLA
LLNARESERGWVVTLGDVLFDTGKANLKSSTSQHLTNLAAFLGKYPQRGAIIEGYTDSVGTEEYNLGLSERRADSVSNFL
QAQGVQSSRLSSQGKGESFPVANNESASGRQQNRRVEVIITNAPQAQR

Sequences:

>Translated_288_residues
MKMPKASSVSPLRFSRQLLSYSLLLTTVAACSSAPKMAEGISDIRTELNTLQANNELAILAPAAISQAEEAVRAAEQPVK
NEQLSQHLVFVADRKVNIALAQAQSRFAEDQQKVLAKNRDDARLDARTTEANQAHQDARLARADAADARQESDDAQAQLA
LLNARESERGWVVTLGDVLFDTGKANLKSSTSQHLTNLAAFLGKYPQRGAIIEGYTDSVGTEEYNLGLSERRADSVSNFL
QAQGVQSSRLSSQGKGESFPVANNESASGRQQNRRVEVIITNAPQAQR
>Mature_288_residues
MKMPKASSVSPLRFSRQLLSYSLLLTTVAACSSAPKMAEGISDIRTELNTLQANNELAILAPAAISQAEEAVRAAEQPVK
NEQLSQHLVFVADRKVNIALAQAQSRFAEDQQKVLAKNRDDARLDARTTEANQAHQDARLARADAADARQESDDAQAQLA
LLNARESERGWVVTLGDVLFDTGKANLKSSTSQHLTNLAAFLGKYPQRGAIIEGYTDSVGTEEYNLGLSERRADSVSNFL
QAQGVQSSRLSSQGKGESFPVANNESASGRQQNRRVEVIITNAPQAQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential). Cell inner membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=105, Percent_Identity=43.8095238095238, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI1788957, Length=118, Percent_Identity=37.2881355932203, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1787191, Length=113, Percent_Identity=38.9380530973451, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1786962, Length=102, Percent_Identity=34.3137254901961, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 31234; Mature: 31234

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMPKASSVSPLRFSRQLLSYSLLLTTVAACSSAPKMAEGISDIRTELNTLQANNELAIL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
APAAISQAEEAVRAAEQPVKNEQLSQHLVFVADRKVNIALAQAQSRFAEDQQKVLAKNRD
EHHHHHHHHHHHHHHHCCCCHHHHHHHEEEEECCCEEEHHHHHHHHHHHHHHHHHHCCCC
DARLDARTTEANQAHQDARLARADAADARQESDDAQAQLALLNARESERGWVVTLGDVLF
CCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEHHHHH
DTGKANLKSSTSQHLTNLAAFLGKYPQRGAIIEGYTDSVGTEEYNLGLSERRADSVSNFL
HCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHCCCHHHHHHHHHHHHH
QAQGVQSSRLSSQGKGESFPVANNESASGRQQNRRVEVIITNAPQAQR
HHCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCEEEEEEECCCCCCC
>Mature Secondary Structure
MKMPKASSVSPLRFSRQLLSYSLLLTTVAACSSAPKMAEGISDIRTELNTLQANNELAIL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
APAAISQAEEAVRAAEQPVKNEQLSQHLVFVADRKVNIALAQAQSRFAEDQQKVLAKNRD
EHHHHHHHHHHHHHHHCCCCHHHHHHHEEEEECCCEEEHHHHHHHHHHHHHHHHHHCCCC
DARLDARTTEANQAHQDARLARADAADARQESDDAQAQLALLNARESERGWVVTLGDVLF
CCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEHHHHH
DTGKANLKSSTSQHLTNLAAFLGKYPQRGAIIEGYTDSVGTEEYNLGLSERRADSVSNFL
HCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHCCCHHHHHHHHHHHHH
QAQGVQSSRLSSQGKGESFPVANNESASGRQQNRRVEVIITNAPQAQR
HHCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 2180922 [H]